RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 GPANK1O95872 356 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 IGHV2-5P01817 119 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 MSMBP08118 114 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 DBHP09172 617 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 ZNF823P16415 610 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 ZNF16P17020 682 aaPredicted RBP5.92□□□□□ -1.46
VPS50-218ENST00000485994 SRD5A1P18405 259 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 GRK5P34947 590 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 CBX1P83916 185 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 TNFAIP6P98066 277 aaPredicted RBP5.92□□□□□ -1.46
VPS50-218ENST00000485994 CDK5Q00535 292 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 PPP1R8Q12972 351 aaKnown RBP5.92□□□□□ -1.46
VPS50-218ENST00000485994 TSTQ16762 297 aaKnown RBP5.92□□□□□ -1.46
VPS50-218ENST00000485994 MEP1BQ16820 701 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 TMEM155Q4W5P6 130 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 NKAPLQ5M9Q1 402 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 LINC01590Q5TEZ4 76 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 CORO6Q6QEF8 472 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 DRAM2Q6UX65 266 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 CXXC5Q7LFL8 322 aaKnown RBP5.92□□□□□ -1.46
VPS50-218ENST00000485994 SHFQ7M4L6 423 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 GLCCI1Q86VQ1 547 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 PLPP7Q8NBV4 271 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 SDR9C7Q8NEX9 313 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 OR10G2Q8NGC3 310 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 OR10S1Q8NGN2 331 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 ZNRF4Q8WWF5 429 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 DNAJC9Q8WXX5 260 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 TMEM158Q8WZ71 300 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 SLC7A6Q92536 515 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 CCL17Q92583 94 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 TMEM186Q96B77 213 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 RAB39BQ96DA2 213 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 DUS3LQ96G46 650 aaKnown RBP5.92□□□□□ -1.46
VPS50-218ENST00000485994 MAP6Q96JE9 813 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 CLPTM1LQ96KA5 538 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 ZNF582Q96NG8 517 aaPredicted RBP5.92□□□□□ -1.46
VPS50-218ENST00000485994 FEVQ99581 238 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 PITX2Q99697 317 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 NIPSNAP1Q9BPW8 284 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 SLC22A4Q9H015 551 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 POFUT1Q9H488 388 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 MSL2Q9HCI7 577 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 G6PC2Q9NQR9 355 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 TPSG1Q9NRR2 321 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 DNAJB9Q9UBS3 223 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 POMPQ9Y244 141 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 POLR1DQ9Y2S0 133 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 NPTNQ9Y639 398 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 J3QLI3 93 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 ZNF593O00488 134 aaPredicted RBP5.91□□□□□ -1.46
VPS50-218ENST00000485994 GNGT2O14610 69 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 TPD52L2O43399 206 aaKnown RBP5.91□□□□□ -1.46
VPS50-218ENST00000485994 PLPP2O43688 288 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 GMDSO60547 372 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 CDC14BO60729 498 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 GLCEO94923 617 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 PTBP3O95758 552 aaKnown RBP5.91□□□□□ -1.46
VPS50-218ENST00000485994 IFNGP01579 166 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 IGHV2-70P01814 119 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 HLA-DQA2P01906 255 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 APOC1P02654 83 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 HMGN1P05114 100 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 OSMP13725 252 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 SPI1P17947 270 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 DDOSTP39656 456 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 SLC15A1P46059 708 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 ENTPD1P49961 510 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 MALLQ13021 153 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 CRMP1Q14194 572 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 GK2Q14410 553 aaPredicted RBP5.91□□□□□ -1.46
VPS50-218ENST00000485994 CLEC12AQ5QGZ9 265 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 OR2T2Q6IF00 324 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 CFAP77Q6ZQR2 320 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 KRT74Q7RTS7 529 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 TMEM179BQ7Z7N9 219 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 NAA40Q86UY6 237 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 KLBQ86Z14 1044 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 LINC00346Q8IVM7 164 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 RFLNBQ8N5W9 214 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 SPERTQ8NA61 448 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 CYB561A3Q8NBI2 242 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 PROKR2Q8NFJ6 384 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 OR4Q3Q8NH05 313 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 OR51F2Q8NH61 342 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 ST7LQ8TDW4 575 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 GTF3AQ92664 365 aaKnown RBP5.91□□□□□ -1.46
VPS50-218ENST00000485994 SPTSSAQ969W0 71 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 SPSB4Q96A44 273 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 KCNJ15Q99712 375 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 HCAR1Q9BXC0 346 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 CADM1Q9BY67 442 aaKnown RBP5.91□□□□□ -1.46
VPS50-218ENST00000485994 TOR3AQ9H497 397 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 OPA3Q9H6K4 179 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 SP140LQ9H930 580 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 PATZ1Q9HBE1 687 aaKnown RBP5.91□□□□□ -1.46
VPS50-218ENST00000485994 GCM1Q9NP62 436 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 TMEM106BQ9NUM4 274 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 TBC1D23Q9NUY8 699 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 TMEM100Q9NV29 134 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms