RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 HKR1P10072 659 aa14.36□□□□□ -0.11
SMC4-216ENST00000485645 CD80P33681 288 aa14.36□□□□□ -0.11
SMC4-216ENST00000485645 LRRN1Q6UXK5 716 aa14.36□□□□□ -0.11
SMC4-216ENST00000485645 PGAM4Q8N0Y7 254 aa14.36□□□□□ -0.11
SMC4-216ENST00000485645 FITM2Q8N6M3 262 aa14.36□□□□□ -0.11
SMC4-216ENST00000485645 CCDC197Q8NCU1 140 aa14.36□□□□□ -0.11
SMC4-216ENST00000485645 SDR9C7Q8NEX9 313 aa14.36□□□□□ -0.11
SMC4-216ENST00000485645 OR52E2Q8NGJ4 325 aa14.36□□□□□ -0.11
SMC4-216ENST00000485645 GNPDA2Q8TDQ7 276 aa14.36□□□□□ -0.11
SMC4-216ENST00000485645 NEIL1Q96FI4 390 aaPredicted RBP14.36□□□□□ -0.11
SMC4-216ENST00000485645 PLEKHA8Q96JA3 519 aa14.36□□□□□ -0.11
SMC4-216ENST00000485645 NSMCE2Q96MF7 247 aa14.36□□□□□ -0.11
SMC4-216ENST00000485645 TMEM246Q9BRR3 403 aa14.36□□□□□ -0.11
SMC4-216ENST00000485645 MS4A7Q9GZW8 240 aaPredicted RBP14.36□□□□□ -0.11
SMC4-216ENST00000485645 ZMAT3Q9HA38 289 aaKnown RBP14.36□□□□□ -0.11
SMC4-216ENST00000485645 CYB5R1Q9UHQ9 305 aa14.36□□□□□ -0.11
SMC4-216ENST00000485645 A0A1B0GWJ7 208 aa14.35□□□□□ -0.11
SMC4-216ENST00000485645 OR6C68A6NDL8 312 aa14.35□□□□□ -0.11
SMC4-216ENST00000485645 DNAJC9-AS1A6NH13 148 aa14.35□□□□□ -0.11
SMC4-216ENST00000485645 FSTL3O95633 263 aa14.35□□□□□ -0.11
SMC4-216ENST00000485645 PPIAL4GP0DN37 164 aa14.35□□□□□ -0.11
SMC4-216ENST00000485645 HSD17B1P14061 328 aa14.35□□□□□ -0.11
SMC4-216ENST00000485645 IRF2P14316 349 aa14.35□□□□□ -0.11
SMC4-216ENST00000485645 RRM2P31350 389 aa14.35□□□□□ -0.11
SMC4-216ENST00000485645 MSX2P35548 267 aaPredicted RBP14.35□□□□□ -0.11
SMC4-216ENST00000485645 GATA4P43694 442 aa14.35□□□□□ -0.11
SMC4-216ENST00000485645 GSSP48637 474 aa14.35□□□□□ -0.11
SMC4-216ENST00000485645 MNAT1P51948 309 aa14.35□□□□□ -0.11
SMC4-216ENST00000485645 TPTEP56180 551 aa14.35□□□□□ -0.11
SMC4-216ENST00000485645 PAX2Q02962 417 aa14.35□□□□□ -0.11
SMC4-216ENST00000485645 TRAP1Q12931 704 aaKnown RBP14.35□□□□□ -0.11
SMC4-216ENST00000485645 TSPAN31Q12999 210 aa14.35□□□□□ -0.11
SMC4-216ENST00000485645 BAMBIQ13145 260 aa14.35□□□□□ -0.11
SMC4-216ENST00000485645 GK2Q14410 553 aaPredicted RBP14.35□□□□□ -0.11
SMC4-216ENST00000485645 ZNF404Q494X3 552 aa14.35□□□□□ -0.11
SMC4-216ENST00000485645 SAMD4BQ5PRF9 694 aaKnown RBP14.35□□□□□ -0.11
SMC4-216ENST00000485645 NLRC3Q7RTR2 1065 aa14.35□□□□□ -0.11
SMC4-216ENST00000485645 OR8B3Q8NGG8 313 aa14.35□□□□□ -0.11
SMC4-216ENST00000485645 RAB40AQ8WXH6 277 aa14.35□□□□□ -0.11
SMC4-216ENST00000485645 SLCO4A1Q96BD0 722 aa14.35□□□□□ -0.11
SMC4-216ENST00000485645 DUX5Q96PT3 197 aa14.35□□□□□ -0.11
SMC4-216ENST00000485645 OR8B2Q96RD0 313 aa14.35□□□□□ -0.11
SMC4-216ENST00000485645 FN3KQ9H479 309 aa14.35□□□□□ -0.11
SMC4-216ENST00000485645 NDE1Q9NXR1 346 aa14.35□□□□□ -0.11
SMC4-216ENST00000485645 IGHV2-70DA0A0C4DH43 119 aa14.34□□□□□ -0.11
SMC4-216ENST00000485645 ARPC2O15144 300 aa14.34□□□□□ -0.11
SMC4-216ENST00000485645 ZNF823P16415 610 aa14.34□□□□□ -0.11
SMC4-216ENST00000485645 GGT2P36268 569 aa14.34□□□□□ -0.11
SMC4-216ENST00000485645 PMELP40967 661 aa14.34□□□□□ -0.11
SMC4-216ENST00000485645 PRSS12P56730 875 aa14.34□□□□□ -0.11
SMC4-216ENST00000485645 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.34□□□□□ -0.11
SMC4-216ENST00000485645 MAB21L1Q13394 359 aa14.34□□□□□ -0.11
SMC4-216ENST00000485645 FAM201AQ5SY85 155 aa14.34□□□□□ -0.11
SMC4-216ENST00000485645 SLC35F1Q5T1Q4 408 aa14.34□□□□□ -0.11
SMC4-216ENST00000485645 C16orf89Q6UX73 402 aa14.34□□□□□ -0.11
SMC4-216ENST00000485645 ZNF620Q6ZNG0 422 aa14.34□□□□□ -0.11
SMC4-216ENST00000485645 PGAP1Q75T13 922 aa14.34□□□□□ -0.11
SMC4-216ENST00000485645 NAA40Q86UY6 237 aa14.34□□□□□ -0.11
SMC4-216ENST00000485645 PARP8Q8N3A8 854 aa14.34□□□□□ -0.11
SMC4-216ENST00000485645 CELF2-AS1Q8N7Q2 184 aa14.34□□□□□ -0.11
SMC4-216ENST00000485645 SPRYD4Q8WW59 207 aaPredicted RBP14.34□□□□□ -0.11
SMC4-216ENST00000485645 ERGIC1Q969X5 290 aa14.34□□□□□ -0.11
SMC4-216ENST00000485645 ZNF48Q96MX3 618 aaPredicted RBP14.34□□□□□ -0.11
SMC4-216ENST00000485645 CDRT15Q96T59 188 aa14.34□□□□□ -0.11
SMC4-216ENST00000485645 IL1RAPQ9NPH3 570 aa14.34□□□□□ -0.11
SMC4-216ENST00000485645 PNRC2Q9NPJ4 139 aaKnown RBP14.34□□□□□ -0.11
SMC4-216ENST00000485645 MRPL22Q9NWU5 206 aaKnown RBP14.34□□□□□ -0.11
SMC4-216ENST00000485645 CD300AQ9UGN4 299 aa14.34□□□□□ -0.11
SMC4-216ENST00000485645 KCNG2Q9UJ96 466 aa14.34□□□□□ -0.11
SMC4-216ENST00000485645 PCDHGB1Q9Y5G3 927 aa14.34□□□□□ -0.11
SMC4-216ENST00000485645 M0R135 149 aa14.33□□□□□ -0.12
SMC4-216ENST00000485645 IGHV4-38-2P0DP08 117 aa14.33□□□□□ -0.12
SMC4-216ENST00000485645 CD200P41217 278 aa14.33□□□□□ -0.12
SMC4-216ENST00000485645 MTNR1AP48039 350 aa14.33□□□□□ -0.12
SMC4-216ENST00000485645 PITPNBP48739 271 aa14.33□□□□□ -0.12
SMC4-216ENST00000485645 SPATS1Q496A3 300 aa14.33□□□□□ -0.12
SMC4-216ENST00000485645 PGBD2Q6P3X8 592 aa14.33□□□□□ -0.12
SMC4-216ENST00000485645 MRPL21Q7Z2W9 205 aaKnown RBP14.33□□□□□ -0.12
SMC4-216ENST00000485645 ZDHHC21Q8IVQ6 265 aa14.33□□□□□ -0.12
SMC4-216ENST00000485645 OR52L1Q8NGH7 329 aa14.33□□□□□ -0.12
SMC4-216ENST00000485645 OR11L1Q8NGX0 322 aa14.33□□□□□ -0.12
SMC4-216ENST00000485645 Q8TCH9 128 aa14.33□□□□□ -0.12
SMC4-216ENST00000485645 SPTSSAQ969W0 71 aa14.33□□□□□ -0.12
SMC4-216ENST00000485645 UPRTQ96BW1 309 aa14.33□□□□□ -0.12
SMC4-216ENST00000485645 ZNF799Q96GE5 643 aa14.33□□□□□ -0.12
SMC4-216ENST00000485645 C1orf147Q96MC9 270 aaPredicted RBP14.33□□□□□ -0.12
SMC4-216ENST00000485645 ZNF747Q9BV97 191 aa14.33□□□□□ -0.12
SMC4-216ENST00000485645 CLN8Q9UBY8 286 aa14.33□□□□□ -0.12
SMC4-216ENST00000485645 IGHV3OR16-10A0A075B7F0 116 aa14.32□□□□□ -0.12
SMC4-216ENST00000485645 KIR2DS1A0A191URI9 304 aa14.32□□□□□ -0.12
SMC4-216ENST00000485645 KRT36O76013 467 aa14.32□□□□□ -0.12
SMC4-216ENST00000485645 RAD23AP54725 363 aa14.32□□□□□ -0.12
SMC4-216ENST00000485645 MXRA7P84157 204 aa14.32□□□□□ -0.12
SMC4-216ENST00000485645 OR8G1Q15617 311 aa14.32□□□□□ -0.12
SMC4-216ENST00000485645 CLEC12AQ5QGZ9 265 aa14.32□□□□□ -0.12
SMC4-216ENST00000485645 RPL13AP3Q6NVV1 102 aa14.32□□□□□ -0.12
SMC4-216ENST00000485645 DCDC5Q6ZRR9 648 aa14.32□□□□□ -0.12
SMC4-216ENST00000485645 DEFB107AQ8IZN7 70 aa14.32□□□□□ -0.12
SMC4-216ENST00000485645 PROKR2Q8NFJ6 384 aa14.32□□□□□ -0.12
SMC4-216ENST00000485645 SLC25A28Q96A46 364 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms