RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 DOK3Q7L591 496 aa21.53■■□□□ 1.04
HLA-F-227ENST00000485513 KLBQ86Z14 1044 aa21.53■■□□□ 1.04
HLA-F-227ENST00000485513 ZDHHC21Q8IVQ6 265 aa21.53■■□□□ 1.04
HLA-F-227ENST00000485513 C1orf87Q8N0U7 546 aa21.53■■□□□ 1.04
HLA-F-227ENST00000485513 PNRC2Q9NPJ4 139 aaKnown RBP21.53■■□□□ 1.04
HLA-F-227ENST00000485513 MIOXQ9UGB7 285 aa21.53■■□□□ 1.04
HLA-F-227ENST00000485513 GNB2P62879 340 aa21.52■■□□□ 1.04
HLA-F-227ENST00000485513 PAX8Q06710 450 aa21.52■■□□□ 1.04
HLA-F-227ENST00000485513 NAA40Q86UY6 237 aa21.52■■□□□ 1.04
HLA-F-227ENST00000485513 PLEKHA8Q96JA3 519 aa21.52■■□□□ 1.04
HLA-F-227ENST00000485513 TMEM246Q9BRR3 403 aa21.52■■□□□ 1.04
HLA-F-227ENST00000485513 MRPL22Q9NWU5 206 aaKnown RBP21.52■■□□□ 1.04
HLA-F-227ENST00000485513 TAGLN3Q9UI15 199 aa21.52■■□□□ 1.04
HLA-F-227ENST00000485513 KCNG2Q9UJ96 466 aa21.52■■□□□ 1.04
HLA-F-227ENST00000485513 ATP8B1O43520 1251 aa21.51■■□□□ 1.03
HLA-F-227ENST00000485513 FSTL3O95633 263 aa21.51■■□□□ 1.03
HLA-F-227ENST00000485513 CD80P33681 288 aa21.51■■□□□ 1.03
HLA-F-227ENST00000485513 PMELP40967 661 aa21.51■■□□□ 1.03
HLA-F-227ENST00000485513 GATA4P43694 442 aa21.51■■□□□ 1.03
HLA-F-227ENST00000485513 TPTEP56180 551 aa21.51■■□□□ 1.03
HLA-F-227ENST00000485513 PAX2Q02962 417 aa21.51■■□□□ 1.03
HLA-F-227ENST00000485513 AWAT1Q58HT5 328 aa21.51■■□□□ 1.03
HLA-F-227ENST00000485513 CLEC12AQ5QGZ9 265 aa21.51■■□□□ 1.03
HLA-F-227ENST00000485513 BTNL3Q6UXE8 466 aa21.51■■□□□ 1.03
HLA-F-227ENST00000485513 BCL6BQ8N143 479 aaPredicted RBP21.51■■□□□ 1.03
HLA-F-227ENST00000485513 OR52L1Q8NGH7 329 aa21.51■■□□□ 1.03
HLA-F-227ENST00000485513 SLCO4A1Q96BD0 722 aa21.51■■□□□ 1.03
HLA-F-227ENST00000485513 NEIL1Q96FI4 390 aaPredicted RBP21.51■■□□□ 1.03
HLA-F-227ENST00000485513 EGLN3Q9H6Z9 239 aa21.51■■□□□ 1.03
HLA-F-227ENST00000485513 ARL8BQ9NVJ2 186 aa21.51■■□□□ 1.03
HLA-F-227ENST00000485513 KRT36O76013 467 aa21.5■■□□□ 1.03
HLA-F-227ENST00000485513 IRF2P14316 349 aa21.5■■□□□ 1.03
HLA-F-227ENST00000485513 ZNF823P16415 610 aa21.5■■□□□ 1.03
HLA-F-227ENST00000485513 ZNF404Q494X3 552 aa21.5■■□□□ 1.03
HLA-F-227ENST00000485513 FAM201AQ5SY85 155 aa21.5■■□□□ 1.03
HLA-F-227ENST00000485513 PGAP1Q75T13 922 aa21.5■■□□□ 1.03
HLA-F-227ENST00000485513 CELF2-AS1Q8N7Q2 184 aa21.5■■□□□ 1.03
HLA-F-227ENST00000485513 MAP6Q96JE9 813 aa21.5■■□□□ 1.03
HLA-F-227ENST00000485513 CDH10Q9Y6N8 788 aa21.5■■□□□ 1.03
HLA-F-227ENST00000485513 IGHV2-70DA0A0C4DH43 119 aa21.49■■□□□ 1.03
HLA-F-227ENST00000485513 M0R135 149 aa21.49■■□□□ 1.03
HLA-F-227ENST00000485513 PRTN3P24158 256 aa21.49■■□□□ 1.03
HLA-F-227ENST00000485513 PYCR1P32322 319 aa21.49■■□□□ 1.03
HLA-F-227ENST00000485513 MAB21L1Q13394 359 aa21.49■■□□□ 1.03
HLA-F-227ENST00000485513 RPL13AP3Q6NVV1 102 aa21.49■■□□□ 1.03
HLA-F-227ENST00000485513 C16orf89Q6UX73 402 aa21.49■■□□□ 1.03
HLA-F-227ENST00000485513 LRRN1Q6UXK5 716 aa21.49■■□□□ 1.03
HLA-F-227ENST00000485513 NLRC3Q7RTR2 1065 aa21.49■■□□□ 1.03
HLA-F-227ENST00000485513 MRPL21Q7Z2W9 205 aaKnown RBP21.49■■□□□ 1.03
HLA-F-227ENST00000485513 DEFB107AQ8IZN7 70 aa21.49■■□□□ 1.03
HLA-F-227ENST00000485513 CYB561A3Q8NBI2 242 aa21.49■■□□□ 1.03
HLA-F-227ENST00000485513 PROKR2Q8NFJ6 384 aa21.49■■□□□ 1.03
HLA-F-227ENST00000485513 OR8B3Q8NGG8 313 aa21.49■■□□□ 1.03
HLA-F-227ENST00000485513 SGMS2Q8NHU3 365 aa21.49■■□□□ 1.03
HLA-F-227ENST00000485513 SPRYD4Q8WW59 207 aaPredicted RBP21.49■■□□□ 1.03
HLA-F-227ENST00000485513 RAB40AQ8WXH6 277 aa21.49■■□□□ 1.03
HLA-F-227ENST00000485513 SPTSSAQ969W0 71 aa21.49■■□□□ 1.03
HLA-F-227ENST00000485513 ERGIC1Q969X5 290 aa21.49■■□□□ 1.03
HLA-F-227ENST00000485513 ZNF799Q96GE5 643 aa21.49■■□□□ 1.03
HLA-F-227ENST00000485513 DUX5Q96PT3 197 aa21.49■■□□□ 1.03
HLA-F-227ENST00000485513 OR8B2Q96RD0 313 aa21.49■■□□□ 1.03
HLA-F-227ENST00000485513 MS4A7Q9GZW8 240 aaPredicted RBP21.49■■□□□ 1.03
HLA-F-227ENST00000485513 NDE1Q9NXR1 346 aa21.49■■□□□ 1.03
HLA-F-227ENST00000485513 DNAJC9-AS1A6NH13 148 aa21.48■■□□□ 1.03
HLA-F-227ENST00000485513 BHLHE40O14503 412 aa21.48■■□□□ 1.03
HLA-F-227ENST00000485513 PPIAL4GP0DN37 164 aa21.48■■□□□ 1.03
HLA-F-227ENST00000485513 HKR1P10072 659 aa21.48■■□□□ 1.03
HLA-F-227ENST00000485513 CD200P41217 278 aa21.48■■□□□ 1.03
HLA-F-227ENST00000485513 HMGA2P52926 109 aa21.48■■□□□ 1.03
HLA-F-227ENST00000485513 SPATS1Q496A3 300 aa21.48■■□□□ 1.03
HLA-F-227ENST00000485513 OR9Q2Q8NGE9 314 aa21.48■■□□□ 1.03
HLA-F-227ENST00000485513 OR10S1Q8NGN2 331 aa21.48■■□□□ 1.03
HLA-F-227ENST00000485513 OR11L1Q8NGX0 322 aa21.48■■□□□ 1.03
HLA-F-227ENST00000485513 OR2T4Q8NH00 348 aa21.48■■□□□ 1.03
HLA-F-227ENST00000485513 Q8TCH9 128 aa21.48■■□□□ 1.03
HLA-F-227ENST00000485513 ZNF48Q96MX3 618 aaPredicted RBP21.48■■□□□ 1.03
HLA-F-227ENST00000485513 ZMAT3Q9HA38 289 aaKnown RBP21.48■■□□□ 1.03
HLA-F-227ENST00000485513 LYVE1Q9Y5Y7 322 aa21.48■■□□□ 1.03
HLA-F-227ENST00000485513 TNFRSF11BO00300 401 aa21.47■■□□□ 1.03
HLA-F-227ENST00000485513 SPRY1O43609 319 aaPredicted RBP21.47■■□□□ 1.03
HLA-F-227ENST00000485513 EGR1P18146 543 aa21.47■■□□□ 1.03
HLA-F-227ENST00000485513 RPS27P42677 84 aaKnown RBP21.47■■□□□ 1.03
HLA-F-227ENST00000485513 PITPNBP48739 271 aa21.47■■□□□ 1.03
HLA-F-227ENST00000485513 MXRA7P84157 204 aa21.47■■□□□ 1.03
HLA-F-227ENST00000485513 FOXL1Q12952 345 aa21.47■■□□□ 1.03
HLA-F-227ENST00000485513 BAMBIQ13145 260 aa21.47■■□□□ 1.03
HLA-F-227ENST00000485513 PARP8Q8N3A8 854 aa21.47■■□□□ 1.03
HLA-F-227ENST00000485513 LINC00471Q8N535 108 aa21.47■■□□□ 1.03
HLA-F-227ENST00000485513 DDOQ99489 341 aa21.47■■□□□ 1.03
HLA-F-227ENST00000485513 BTBD10Q9BSF8 475 aa21.47■■□□□ 1.03
HLA-F-227ENST00000485513 ARL2BPQ9Y2Y0 163 aa21.47■■□□□ 1.03
HLA-F-227ENST00000485513 NOP16Q9Y3C1 178 aaKnown RBP21.47■■□□□ 1.03
HLA-F-227ENST00000485513 TVP23AA6NH52 213 aa21.46■■□□□ 1.03
HLA-F-227ENST00000485513 FAM20BO75063 409 aa21.46■■□□□ 1.03
HLA-F-227ENST00000485513 IGHV4-38-2P0DP08 117 aa21.46■■□□□ 1.03
HLA-F-227ENST00000485513 RAD23AP54725 363 aa21.46■■□□□ 1.03
HLA-F-227ENST00000485513 OR8G1Q15617 311 aa21.46■■□□□ 1.03
HLA-F-227ENST00000485513 PRAMEF6Q5VXH4 476 aa21.46■■□□□ 1.03
HLA-F-227ENST00000485513 DCDC5Q6ZRR9 648 aa21.46■■□□□ 1.03
HLA-F-227ENST00000485513 DACT3Q96B18 629 aaPredicted RBP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms