RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 CENPMQ9NSP4 180 aa15.16■□□□□ 0.02
SREBF1-213ENST00000485080 H2AFY2Q9P0M6 372 aaPredicted RBP15.16■□□□□ 0.02
SREBF1-213ENST00000485080 A0A1B0GWJ7 208 aa15.15■□□□□ 0.02
SREBF1-213ENST00000485080 BAG2O95816 211 aa15.15■□□□□ 0.02
SREBF1-213ENST00000485080 LCATP04180 440 aa15.15■□□□□ 0.02
SREBF1-213ENST00000485080 LYNP07948 512 aa15.15■□□□□ 0.02
SREBF1-213ENST00000485080 CD55P08174 381 aa15.15■□□□□ 0.02
SREBF1-213ENST00000485080 MALLQ13021 153 aa15.15■□□□□ 0.02
SREBF1-213ENST00000485080 CDK5R2Q13319 367 aa15.15■□□□□ 0.02
SREBF1-213ENST00000485080 TAF13Q15543 124 aa15.15■□□□□ 0.02
SREBF1-213ENST00000485080 NAA40Q86UY6 237 aa15.15■□□□□ 0.02
SREBF1-213ENST00000485080 IL4I1Q96RQ9 567 aa15.15■□□□□ 0.02
SREBF1-213ENST00000485080 AMELYQ99218 206 aa15.15■□□□□ 0.02
SREBF1-213ENST00000485080 NIPAL2Q9H841 368 aa15.15■□□□□ 0.02
SREBF1-213ENST00000485080 SP140LQ9H930 580 aa15.15■□□□□ 0.02
SREBF1-213ENST00000485080 WARS2Q9UGM6 360 aaKnown RBP15.15■□□□□ 0.02
SREBF1-213ENST00000485080 TMEM14AQ9Y6G1 99 aa15.15■□□□□ 0.02
SREBF1-213ENST00000485080 HIVEP2P31629 2446 aa15.15■□□□□ 0.02
SREBF1-213ENST00000485080 ZSCAN5BA6NJL1 495 aa15.14■□□□□ 0.01
SREBF1-213ENST00000485080 M0R129 80 aa15.14■□□□□ 0.01
SREBF1-213ENST00000485080 TIMM8AO60220 97 aaPredicted RBP15.14■□□□□ 0.01
SREBF1-213ENST00000485080 HPXP02790 462 aa15.14■□□□□ 0.01
SREBF1-213ENST00000485080 ANPEPP15144 967 aa15.14■□□□□ 0.01
SREBF1-213ENST00000485080 SELEP16581 610 aa15.14■□□□□ 0.01
SREBF1-213ENST00000485080 HTR1FP30939 366 aa15.14■□□□□ 0.01
SREBF1-213ENST00000485080 SNRPGP62308 76 aaKnown RBP15.14■□□□□ 0.01
SREBF1-213ENST00000485080 ROM1Q03395 351 aa15.14■□□□□ 0.01
SREBF1-213ENST00000485080 LOXL1Q08397 574 aaPredicted RBP15.14■□□□□ 0.01
SREBF1-213ENST00000485080 RIN1Q13671 783 aa15.14■□□□□ 0.01
SREBF1-213ENST00000485080 GK2Q14410 553 aaPredicted RBP15.14■□□□□ 0.01
SREBF1-213ENST00000485080 ALKBH6Q3KRA9 238 aa15.14■□□□□ 0.01
SREBF1-213ENST00000485080 PRSS45Q7RTY3 260 aa15.14■□□□□ 0.01
SREBF1-213ENST00000485080 RDH5Q92781 318 aa15.14■□□□□ 0.01
SREBF1-213ENST00000485080 MBOAT4Q96T53 435 aa15.14■□□□□ 0.01
SREBF1-213ENST00000485080 CNN2Q99439 309 aaKnown RBP15.14■□□□□ 0.01
SREBF1-213ENST00000485080 OPA3Q9H6K4 179 aa15.14■□□□□ 0.01
SREBF1-213ENST00000485080 PTTG3PQ9NZH4 202 aa15.14■□□□□ 0.01
SREBF1-213ENST00000485080 IQCF6A8MYZ5 107 aa15.13■□□□□ 0.01
SREBF1-213ENST00000485080 RNF223E7ERA6 249 aa15.13■□□□□ 0.01
SREBF1-213ENST00000485080 NCR1O76036 304 aa15.13■□□□□ 0.01
SREBF1-213ENST00000485080 IGHV1-46P01743 117 aa15.13■□□□□ 0.01
SREBF1-213ENST00000485080 ACHEP22303 614 aa15.13■□□□□ 0.01
SREBF1-213ENST00000485080 DCTDP32321 178 aa15.13■□□□□ 0.01
SREBF1-213ENST00000485080 NAA10P41227 235 aaPredicted RBP15.13■□□□□ 0.01
SREBF1-213ENST00000485080 NR4A2P43354 598 aa15.13■□□□□ 0.01
SREBF1-213ENST00000485080 MAGEB1P43366 347 aa15.13■□□□□ 0.01
SREBF1-213ENST00000485080 SLC6A9P48067 706 aa15.13■□□□□ 0.01
SREBF1-213ENST00000485080 PRKXP51817 358 aa15.13■□□□□ 0.01
SREBF1-213ENST00000485080 HLXQ14774 488 aaPredicted RBP15.13■□□□□ 0.01
SREBF1-213ENST00000485080 BCDIN3DQ7Z5W3 292 aaKnown RBP15.13■□□□□ 0.01
SREBF1-213ENST00000485080 OR52H1Q8NGJ2 320 aa15.13■□□□□ 0.01
SREBF1-213ENST00000485080 THEM6Q8WUY1 208 aa15.13■□□□□ 0.01
SREBF1-213ENST00000485080 ASB17Q8WXJ9 295 aa15.13■□□□□ 0.01
SREBF1-213ENST00000485080 RFKQ969G6 155 aa15.13■□□□□ 0.01
SREBF1-213ENST00000485080 SPSB4Q96A44 273 aa15.13■□□□□ 0.01
SREBF1-213ENST00000485080 PIMREGQ9BSJ6 248 aa15.13■□□□□ 0.01
SREBF1-213ENST00000485080 REPIN1Q9BWE0 567 aaKnown RBP15.13■□□□□ 0.01
SREBF1-213ENST00000485080 CHODLQ9H9P2 273 aa15.13■□□□□ 0.01
SREBF1-213ENST00000485080 ADGRL4Q9HBW9 690 aa15.13■□□□□ 0.01
SREBF1-213ENST00000485080 LAMP5Q9UJQ1 280 aa15.13■□□□□ 0.01
SREBF1-213ENST00000485080 KLHDC2Q9Y2U9 406 aa15.13■□□□□ 0.01
SREBF1-213ENST00000485080 ANK3Q12955 4377 aaKnown RBP15.13■□□□□ 0.01
SREBF1-213ENST00000485080 CR1P17927 2039 aa15.12■□□□□ 0.01
SREBF1-213ENST00000485080 ANKRD65E5RJM6 399 aa15.12■□□□□ 0.01
SREBF1-213ENST00000485080 SLC16A6O15403 523 aa15.12■□□□□ 0.01
SREBF1-213ENST00000485080 ZNF254O75437 659 aa15.12■□□□□ 0.01
SREBF1-213ENST00000485080 H2BFMP0C1H6 154 aa15.12■□□□□ 0.01
SREBF1-213ENST00000485080 SBK2P0C263 348 aa15.12■□□□□ 0.01
SREBF1-213ENST00000485080 HSD11B1P28845 292 aa15.12■□□□□ 0.01
SREBF1-213ENST00000485080 CRYBB2P43320 205 aa15.12■□□□□ 0.01
SREBF1-213ENST00000485080 TMEM33P57088 247 aa15.12■□□□□ 0.01
SREBF1-213ENST00000485080 POU4F2Q12837 409 aa15.12■□□□□ 0.01
SREBF1-213ENST00000485080 RCN1Q15293 331 aa15.12■□□□□ 0.01
SREBF1-213ENST00000485080 SNAI3Q3KNW1 292 aa15.12■□□□□ 0.01
SREBF1-213ENST00000485080 ZIK1Q3SY52 487 aaPredicted RBP15.12■□□□□ 0.01
SREBF1-213ENST00000485080 OR2T2Q6IF00 324 aa15.12■□□□□ 0.01
SREBF1-213ENST00000485080 KCTD18Q6PI47 426 aaPredicted RBP15.12■□□□□ 0.01
SREBF1-213ENST00000485080 Q6ZR03 302 aa15.12■□□□□ 0.01
SREBF1-213ENST00000485080 PACRGLQ8N7B6 248 aa15.12■□□□□ 0.01
SREBF1-213ENST00000485080 ZNF283Q8N7M2 679 aa15.12■□□□□ 0.01
SREBF1-213ENST00000485080 OR8G5Q8NG78 346 aa15.12■□□□□ 0.01
SREBF1-213ENST00000485080 FAM81AQ8TBF8 368 aa15.12■□□□□ 0.01
SREBF1-213ENST00000485080 GTF3AQ92664 365 aaKnown RBP15.12■□□□□ 0.01
SREBF1-213ENST00000485080 ZNF582Q96NG8 517 aaPredicted RBP15.12■□□□□ 0.01
SREBF1-213ENST00000485080 SLC30A2Q9BRI3 323 aa15.12■□□□□ 0.01
SREBF1-213ENST00000485080 EGLN1Q9GZT9 426 aa15.12■□□□□ 0.01
SREBF1-213ENST00000485080 IMPAD1Q9NX62 359 aa15.12■□□□□ 0.01
SREBF1-213ENST00000485080 SONP18583 2426 aaKnown RBP15.12■□□□□ 0.01
SREBF1-213ENST00000485080 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.11■□□□□ 0.013e-6■□□□□ 10.6
SREBF1-213ENST00000485080 NF1P21359 2839 aa15.11■□□□□ 0.01
SREBF1-213ENST00000485080 ACOD1A6NK06 481 aa15.11■□□□□ 0.01
SREBF1-213ENST00000485080 DLGAP1O14490 977 aa15.11■□□□□ 0.01
SREBF1-213ENST00000485080 PHYHO14832 338 aa15.11■□□□□ 0.01
SREBF1-213ENST00000485080 XRCC2O43543 280 aa15.11■□□□□ 0.01
SREBF1-213ENST00000485080 RP2O75695 350 aa15.11■□□□□ 0.01
SREBF1-213ENST00000485080 CX3CR1P49238 355 aa15.11■□□□□ 0.01
SREBF1-213ENST00000485080 CCL8P80075 99 aa15.11■□□□□ 0.01
SREBF1-213ENST00000485080 OCLNQ16625 522 aa15.11■□□□□ 0.01
SREBF1-213ENST00000485080 MEDAGQ5VYS4 303 aa15.11■□□□□ 0.01
SREBF1-213ENST00000485080 PGAP1Q75T13 922 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms