RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 ZDHHC8Q9ULC8 765 aa17.85■□□□□ 0.45
SEC13-217ENST00000482647 GMPPBQ9Y5P6 360 aa17.85■□□□□ 0.45
SEC13-217ENST00000482647 LOC390937A0A1W2PQ73 354 aa17.84■□□□□ 0.45
SEC13-217ENST00000482647 E9PQ18 207 aa17.84■□□□□ 0.45
SEC13-217ENST00000482647 NDUFS8O00217 210 aa17.84■□□□□ 0.45
SEC13-217ENST00000482647 HTR1FP30939 366 aa17.84■□□□□ 0.45
SEC13-217ENST00000482647 CX3CR1P49238 355 aa17.84■□□□□ 0.45
SEC13-217ENST00000482647 HCCSP53701 268 aa17.84■□□□□ 0.45
SEC13-217ENST00000482647 CARTPTQ16568 116 aa17.84■□□□□ 0.45
SEC13-217ENST00000482647 ZNF786Q8N393 782 aa17.84■□□□□ 0.45
SEC13-217ENST00000482647 C10orf105Q8TEF2 133 aa17.84■□□□□ 0.45
SEC13-217ENST00000482647 ZNF582Q96NG8 517 aaPredicted RBP17.84■□□□□ 0.45
SEC13-217ENST00000482647 RDH12Q96NR8 316 aa17.84■□□□□ 0.45
SEC13-217ENST00000482647 REG4Q9BYZ8 158 aa17.84■□□□□ 0.45
SEC13-217ENST00000482647 DECR2Q9NUI1 292 aa17.84■□□□□ 0.45
SEC13-217ENST00000482647 KLHDC2Q9Y2U9 406 aa17.84■□□□□ 0.45
SEC13-217ENST00000482647 ACANP16112 2415 aa17.83■□□□□ 0.45
SEC13-217ENST00000482647 IGHV4-30-2A0A087WSY4 118 aa17.83■□□□□ 0.44
SEC13-217ENST00000482647 RNF223E7ERA6 249 aa17.83■□□□□ 0.44
SEC13-217ENST00000482647 SPRY3O43610 288 aa17.83■□□□□ 0.44
SEC13-217ENST00000482647 SLC25A16P16260 332 aa17.83■□□□□ 0.44
SEC13-217ENST00000482647 SELEP16581 610 aa17.83■□□□□ 0.44
SEC13-217ENST00000482647 MAGEB1P43366 347 aa17.83■□□□□ 0.44
SEC13-217ENST00000482647 SNRPGP62308 76 aaKnown RBP17.83■□□□□ 0.44
SEC13-217ENST00000482647 ELF3P78545 371 aaPredicted RBP17.83■□□□□ 0.44
SEC13-217ENST00000482647 TMED1Q13445 227 aa17.83■□□□□ 0.44
SEC13-217ENST00000482647 GK2Q14410 553 aaPredicted RBP17.83■□□□□ 0.44
SEC13-217ENST00000482647 KCTD18Q6PI47 426 aaPredicted RBP17.83■□□□□ 0.44
SEC13-217ENST00000482647 CIARTQ8N365 385 aaPredicted RBP17.83■□□□□ 0.44
SEC13-217ENST00000482647 GALNT4Q8N4A0 578 aa17.83■□□□□ 0.44
SEC13-217ENST00000482647 ASB17Q8WXJ9 295 aa17.83■□□□□ 0.44
SEC13-217ENST00000482647 GTF3AQ92664 365 aaKnown RBP17.83■□□□□ 0.44
SEC13-217ENST00000482647 UBE2FQ969M7 185 aa17.83■□□□□ 0.44
SEC13-217ENST00000482647 COX4I2Q96KJ9 171 aa17.83■□□□□ 0.44
SEC13-217ENST00000482647 DIRC2Q96SL1 478 aa17.83■□□□□ 0.44
SEC13-217ENST00000482647 MNTQ99583 582 aa17.83■□□□□ 0.44
SEC13-217ENST00000482647 DCLRE1BQ9H816 532 aa17.83■□□□□ 0.44
SEC13-217ENST00000482647 ADGRL4Q9HBW9 690 aa17.83■□□□□ 0.44
SEC13-217ENST00000482647 SMPD3Q9NY59 655 aaPredicted RBP17.83■□□□□ 0.44
SEC13-217ENST00000482647 N6AMT1Q9Y5N5 214 aa17.83■□□□□ 0.44
SEC13-217ENST00000482647 LOC100130705A0A1B0GUX0 176 aa17.82■□□□□ 0.44
SEC13-217ENST00000482647 ZSCAN5BA6NJL1 495 aa17.82■□□□□ 0.44
SEC13-217ENST00000482647 SMAD7O15105 426 aaKnown RBP17.82■□□□□ 0.44
SEC13-217ENST00000482647 TPD52L2O43399 206 aaKnown RBP17.82■□□□□ 0.44
SEC13-217ENST00000482647 IGHV1-46P01743 117 aa17.82■□□□□ 0.44
SEC13-217ENST00000482647 HPXP02790 462 aa17.82■□□□□ 0.44
SEC13-217ENST00000482647 ANXA2P07355 339 aaKnown RBP17.82■□□□□ 0.44
SEC13-217ENST00000482647 INHBBP09529 407 aa17.82■□□□□ 0.44
SEC13-217ENST00000482647 SLC2A1P11166 492 aa17.82■□□□□ 0.44
SEC13-217ENST00000482647 CCL8P80075 99 aa17.82■□□□□ 0.44
SEC13-217ENST00000482647 MRPS11P82912 194 aaKnown RBP17.82■□□□□ 0.44
SEC13-217ENST00000482647 POU4F2Q12837 409 aa17.82■□□□□ 0.44
SEC13-217ENST00000482647 TSTQ16762 297 aaKnown RBP17.82■□□□□ 0.44
SEC13-217ENST00000482647 LRRC36Q1X8D7 754 aa17.82■□□□□ 0.44
SEC13-217ENST00000482647 SNAI3Q3KNW1 292 aa17.82■□□□□ 0.44
SEC13-217ENST00000482647 FAM209AQ5JX71 171 aa17.82■□□□□ 0.44
SEC13-217ENST00000482647 SLC25A30Q5SVS4 291 aa17.82■□□□□ 0.44
SEC13-217ENST00000482647 MEDAGQ5VYS4 303 aa17.82■□□□□ 0.44
SEC13-217ENST00000482647 LPCAT4Q643R3 524 aa17.82■□□□□ 0.44
SEC13-217ENST00000482647 OR2T2Q6IF00 324 aa17.82■□□□□ 0.44
SEC13-217ENST00000482647 PGAP1Q75T13 922 aa17.82■□□□□ 0.44
SEC13-217ENST00000482647 MRPL21Q7Z2W9 205 aaKnown RBP17.82■□□□□ 0.44
SEC13-217ENST00000482647 KRT77Q7Z794 578 aa17.82■□□□□ 0.44
SEC13-217ENST00000482647 PACRGLQ8N7B6 248 aa17.82■□□□□ 0.44
SEC13-217ENST00000482647 ZNF540Q8NDQ6 660 aa17.82■□□□□ 0.44
SEC13-217ENST00000482647 RDH5Q92781 318 aa17.82■□□□□ 0.44
SEC13-217ENST00000482647 PIMREGQ9BSJ6 248 aa17.82■□□□□ 0.44
SEC13-217ENST00000482647 EGLN1Q9GZT9 426 aa17.82■□□□□ 0.44
SEC13-217ENST00000482647 NIPAL2Q9H841 368 aa17.82■□□□□ 0.44
SEC13-217ENST00000482647 MSL2Q9HCI7 577 aa17.82■□□□□ 0.44
SEC13-217ENST00000482647 FAM118AQ9NWS6 357 aa17.82■□□□□ 0.44
SEC13-217ENST00000482647 DNAJC27Q9NZQ0 273 aa17.82■□□□□ 0.44
SEC13-217ENST00000482647 SLC16A6O15403 523 aa17.81■□□□□ 0.44
SEC13-217ENST00000482647 ADH4P08319 380 aa17.81■□□□□ 0.44
SEC13-217ENST00000482647 SBK2P0C263 348 aa17.81■□□□□ 0.44
SEC13-217ENST00000482647 ATP6V1E1P36543 226 aa17.81■□□□□ 0.44
SEC13-217ENST00000482647 CDK5R2Q13319 367 aa17.81■□□□□ 0.44
SEC13-217ENST00000482647 DEGS2Q6QHC5 323 aa17.81■□□□□ 0.44
SEC13-217ENST00000482647 LRRN1Q6UXK5 716 aa17.81■□□□□ 0.44
SEC13-217ENST00000482647 USP51Q70EK9 711 aa17.81■□□□□ 0.44
SEC13-217ENST00000482647 SLC35F2Q8IXU6 374 aa17.81■□□□□ 0.44
SEC13-217ENST00000482647 ZNF555Q8NEP9 628 aa17.81■□□□□ 0.44
SEC13-217ENST00000482647 OR52H1Q8NGJ2 320 aa17.81■□□□□ 0.44
SEC13-217ENST00000482647 OR51G2Q8NGK0 314 aa17.81■□□□□ 0.44
SEC13-217ENST00000482647 MROQ9BYG7 248 aa17.81■□□□□ 0.44
SEC13-217ENST00000482647 CLN6Q9NWW5 311 aa17.81■□□□□ 0.44
SEC13-217ENST00000482647 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.81■□□□□ 0.44
SEC13-217ENST00000482647 TEP1Q99973 2627 aaKnown RBP17.81■□□□□ 0.44
SEC13-217ENST00000482647 SNTNA6NMZ2 147 aa17.8■□□□□ 0.44
SEC13-217ENST00000482647 PHYHO14832 338 aa17.8■□□□□ 0.44
SEC13-217ENST00000482647 MPZL2O60487 215 aa17.8■□□□□ 0.44
SEC13-217ENST00000482647 ENTPD6O75354 484 aa17.8■□□□□ 0.44
SEC13-217ENST00000482647 ZNF254O75437 659 aa17.8■□□□□ 0.44
SEC13-217ENST00000482647 TNFSF4P23510 183 aa17.8■□□□□ 0.44
SEC13-217ENST00000482647 PEX2P28328 305 aa17.8■□□□□ 0.44
SEC13-217ENST00000482647 ZNF121P58317 390 aaPredicted RBP17.8■□□□□ 0.44
SEC13-217ENST00000482647 ROM1Q03395 351 aa17.8■□□□□ 0.44
SEC13-217ENST00000482647 OCLNQ16625 522 aa17.8■□□□□ 0.44
SEC13-217ENST00000482647 OR5AS1Q8N127 324 aa17.8■□□□□ 0.44
SEC13-217ENST00000482647 OR8G5Q8NG78 346 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms