RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 SRP9P49458 86 aaKnown RBP3.45□□□□□ -1.86
VPS41-212ENST00000482217 FOXG1P55316 489 aaPredicted RBP3.45□□□□□ -1.86
VPS41-212ENST00000482217 POU6F1Q14863 301 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 ATP6AP1Q15904 470 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 SYT6Q5T7P8 510 aaPredicted RBP3.45□□□□□ -1.86
VPS41-212ENST00000482217 EPGNQ6UW88 154 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 FRRS1Q6ZNA5 592 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 MBOAT2Q6ZWT7 520 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 OLIG3Q7RTU3 272 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 GALNT10Q86SR1 603 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 ATPAF2Q8N5M1 289 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 ZNF114Q8NC26 417 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 ST6GALNAC3Q8NDV1 305 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 DUSP18Q8NEJ0 188 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 SLC26A10Q8NG04 563 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 OR6K6Q8NGW6 343 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 OR56B4Q8NH76 319 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 AENQ8WTP8 325 aaKnown RBP3.45□□□□□ -1.86
VPS41-212ENST00000482217 TFB1MQ8WVM0 346 aaKnown RBP3.45□□□□□ -1.86
VPS41-212ENST00000482217 TMED6Q8WW62 240 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 TMBIM1Q969X1 311 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 DNAJC19Q96DA6 116 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 SDSLQ96GA7 329 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 SCMH1Q96GD3 660 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 ZNF681Q96N22 645 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 MS4A4EQ96PG1 132 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 GABRG3Q99928 467 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 FOXC2Q99958 501 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 ZNF670Q9BS34 389 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 URM1Q9BTM9 101 aaKnown RBP3.45□□□□□ -1.86
VPS41-212ENST00000482217 CABLES2Q9BTV7 478 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 PECRQ9BY49 303 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 ACTR6Q9GZN1 396 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 BOLA2Q9H3K6 86 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 MAP1LC3AQ9H492 121 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 ZBTB20Q9HC78 741 aaPredicted RBP3.45□□□□□ -1.86
VPS41-212ENST00000482217 ZNF334Q9HCZ1 680 aaPredicted RBP3.45□□□□□ -1.86
VPS41-212ENST00000482217 TMEM138Q9NPI0 162 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 MIEF1Q9NQG6 463 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 CD84Q9UIB8 345 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 FBXL4Q9UKA2 621 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 MGAT4AQ9UM21 535 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 GOLT1BQ9Y3E0 138 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 NUP153P49790 1475 aaKnown RBP3.45□□□□□ -1.86
VPS41-212ENST00000482217 ERCC6Q03468 1493 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 WDR7Q9Y4E6 1490 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 ADAMTSL3P82987 1691 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.44□□□□□ -1.86
VPS41-212ENST00000482217 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.44□□□□□ -1.86
VPS41-212ENST00000482217 C15orf65H3BRN8 121 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 CLDN14O95500 239 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 HOXC4P09017 264 aaPredicted RBP3.44□□□□□ -1.86
VPS41-212ENST00000482217 FAM157CP0CG43 387 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 FGF3P11487 239 aaPredicted RBP3.44□□□□□ -1.86
VPS41-212ENST00000482217 GP1BBP13224 206 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 ALOX5APP20292 161 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 CXCR1P25024 350 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 CALML3P27482 149 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 SLC6A1P30531 599 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 CCKARP32238 428 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 IFNGR2P38484 337 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 THBS3P49746 956 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 EMDP50402 254 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 HCCSP53701 268 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 CDH11P55287 796 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 MS4A2Q01362 244 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 ZNF155Q12901 538 aaPredicted RBP3.44□□□□□ -1.86
VPS41-212ENST00000482217 ZNF235Q14590 738 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 SPA17Q15506 151 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 CYP51A1Q16850 503 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 LRRC75BQ2VPJ9 315 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 FAM120AOSQ5T036 256 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 CPTPQ5TA50 214 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 FHL5Q5TD97 284 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 TRNP1Q6NT89 227 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 ZNF774Q6NX45 483 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 ADAMTSL5Q6ZMM2 481 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 ZNF730Q6ZMV8 503 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 C16orf82Q7Z2V1 217 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 MRPL52Q86TS9 123 aaKnown RBP3.44□□□□□ -1.86
VPS41-212ENST00000482217 APLFQ8IW19 511 aaPredicted RBP3.44□□□□□ -1.86
VPS41-212ENST00000482217 SLC30A8Q8IWU4 369 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 CPNE9Q8IYJ1 553 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 VKORC1L1Q8N0U8 176 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 ARIH2OSQ8N7S6 290 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 OR5AR1Q8NGP9 310 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 SPATA3Q8NHX4 192 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 ZNF502Q8TBZ5 544 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 ABHD3Q8WU67 409 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 HPSE2Q8WWQ2 592 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 C11orf40Q8WZ69 217 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 MRPS31Q92665 395 aaKnown RBP3.44□□□□□ -1.86
VPS41-212ENST00000482217 UFD1Q92890 307 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 TADA1Q96BN2 335 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 SCGB3A2Q96PL1 93 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 QKIQ96PU8 341 aaKnown RBP eCLIP3.44□□□□□ -1.86
VPS41-212ENST00000482217 CSF3RQ99062 836 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 TBX5Q99593 518 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 OVOL2Q9BRP0 275 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 TMED9Q9BVK6 235 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms