RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 UNQ6126/PRO20091Q6UXV3 157 aa10.84□□□□□ -0.67
TRAPPC12-218ENST00000479897 MEX3BQ6ZN04 569 aaKnown RBP10.84□□□□□ -0.67
TRAPPC12-218ENST00000479897 CATSPERDQ86XM0 798 aa10.84□□□□□ -0.67
TRAPPC12-218ENST00000479897 NUP37Q8NFH4 326 aa10.84□□□□□ -0.67
TRAPPC12-218ENST00000479897 OR52H1Q8NGJ2 320 aa10.84□□□□□ -0.67
TRAPPC12-218ENST00000479897 APOBEC3DQ96AK3 386 aaPredicted RBP10.84□□□□□ -0.67
TRAPPC12-218ENST00000479897 RADILQ96JH8 1075 aa10.84□□□□□ -0.67
TRAPPC12-218ENST00000479897 COG8Q96MW5 612 aa10.84□□□□□ -0.67
TRAPPC12-218ENST00000479897 OR5M11Q96RB7 305 aa10.84□□□□□ -0.67
TRAPPC12-218ENST00000479897 KCNS3Q9BQ31 491 aa10.84□□□□□ -0.67
TRAPPC12-218ENST00000479897 TMEM204Q9BSN7 226 aa10.84□□□□□ -0.67
TRAPPC12-218ENST00000479897 BCL2L14Q9BZR8 327 aa10.84□□□□□ -0.67
TRAPPC12-218ENST00000479897 TUBG2Q9NRH3 451 aa10.84□□□□□ -0.67
TRAPPC12-218ENST00000479897 BABAM2Q9NXR7 383 aa10.84□□□□□ -0.67
TRAPPC12-218ENST00000479897 ZNF391Q9UJN7 358 aa10.84□□□□□ -0.67
TRAPPC12-218ENST00000479897 FASNP49327 2511 aaKnown RBP10.84□□□□□ -0.67
TRAPPC12-218ENST00000479897 DOPEY2Q9Y3R5 2298 aa10.83□□□□□ -0.68
TRAPPC12-218ENST00000479897 A0A0U1RQV5 110 aa10.83□□□□□ -0.68
TRAPPC12-218ENST00000479897 H3BSA7 217 aa10.83□□□□□ -0.68
TRAPPC12-218ENST00000479897 ABCD4O14678 606 aa10.83□□□□□ -0.68
TRAPPC12-218ENST00000479897 CASKO14936 926 aa10.83□□□□□ -0.68
TRAPPC12-218ENST00000479897 LALBAP00709 142 aa10.83□□□□□ -0.68
TRAPPC12-218ENST00000479897 IGLV3-1P01715 115 aa10.83□□□□□ -0.68
TRAPPC12-218ENST00000479897 CD1AP06126 327 aa10.83□□□□□ -0.68
TRAPPC12-218ENST00000479897 CCL2P13500 99 aa10.83□□□□□ -0.68
TRAPPC12-218ENST00000479897 NR4A1P22736 598 aa10.83□□□□□ -0.68
TRAPPC12-218ENST00000479897 MAP2K4P45985 399 aa10.83□□□□□ -0.68
TRAPPC12-218ENST00000479897 SLC6A9P48067 706 aa10.83□□□□□ -0.68
TRAPPC12-218ENST00000479897 MLLT11Q13015 90 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC12-218ENST00000479897 ALKBH1Q13686 389 aaKnown RBP10.83□□□□□ -0.68
TRAPPC12-218ENST00000479897 CDK5R1Q15078 307 aa10.83□□□□□ -0.68
TRAPPC12-218ENST00000479897 RPL22L1Q6P5R6 122 aaKnown RBP10.83□□□□□ -0.68
TRAPPC12-218ENST00000479897 RFPL4BQ6ZWI9 263 aa10.83□□□□□ -0.68
TRAPPC12-218ENST00000479897 KLBQ86Z14 1044 aa10.83□□□□□ -0.68
TRAPPC12-218ENST00000479897 ELMOD2Q8IZ81 293 aa10.83□□□□□ -0.68
TRAPPC12-218ENST00000479897 ZNF101Q8IZC7 436 aa10.83□□□□□ -0.68
TRAPPC12-218ENST00000479897 OR8B12Q8NGG6 310 aa10.83□□□□□ -0.68
TRAPPC12-218ENST00000479897 OR2G2Q8NGZ5 317 aa10.83□□□□□ -0.68
TRAPPC12-218ENST00000479897 GATAD2BQ8WXI9 593 aa10.83□□□□□ -0.68
TRAPPC12-218ENST00000479897 ITFG2Q969R8 447 aa10.83□□□□□ -0.68
TRAPPC12-218ENST00000479897 PLPPR2Q96GM1 343 aa10.83□□□□□ -0.68
TRAPPC12-218ENST00000479897 MRPS26Q9BYN8 205 aaKnown RBP10.83□□□□□ -0.68
TRAPPC12-218ENST00000479897 RGCCQ9H4X1 137 aa10.83□□□□□ -0.68
TRAPPC12-218ENST00000479897 OPA3Q9H6K4 179 aa10.83□□□□□ -0.68
TRAPPC12-218ENST00000479897 VCX3AQ9NNX9 186 aa10.83□□□□□ -0.68
TRAPPC12-218ENST00000479897 EIF3KQ9UBQ5 218 aaKnown RBP10.83□□□□□ -0.68
TRAPPC12-218ENST00000479897 ST6GALNAC2Q9UJ37 374 aa10.83□□□□□ -0.68
TRAPPC12-218ENST00000479897 GRIP1Q9Y3R0 1128 aa10.83□□□□□ -0.68
TRAPPC12-218ENST00000479897 GCN1Q92616 2671 aaKnown RBP10.83□□□□□ -0.68
TRAPPC12-218ENST00000479897 PKDREJQ9NTG1 2253 aa10.83□□□□□ -0.68
TRAPPC12-218ENST00000479897 FAM221AA4D161 298 aa10.82□□□□□ -0.68
TRAPPC12-218ENST00000479897 OR4C45A6NMZ5 311 aa10.82□□□□□ -0.68
TRAPPC12-218ENST00000479897 E9PI62 339 aa10.82□□□□□ -0.68
TRAPPC12-218ENST00000479897 ATP6V1G2-DDX39BF2Z307 99 aa10.82□□□□□ -0.68
TRAPPC12-218ENST00000479897 OGG1O15527 345 aa10.82□□□□□ -0.68
TRAPPC12-218ENST00000479897 XRCC2O43543 280 aa10.82□□□□□ -0.68
TRAPPC12-218ENST00000479897 RPP14O95059 124 aaKnown RBP10.82□□□□□ -0.68
TRAPPC12-218ENST00000479897 LCKP06239 509 aa10.82□□□□□ -0.68
TRAPPC12-218ENST00000479897 ANXA2P07355 339 aaKnown RBP10.82□□□□□ -0.68
TRAPPC12-218ENST00000479897 CD3EP07766 207 aa10.82□□□□□ -0.68
TRAPPC12-218ENST00000479897 RPSAP08865 295 aaKnown RBP10.82□□□□□ -0.68
TRAPPC12-218ENST00000479897 JUNBP17275 347 aaPredicted RBP10.82□□□□□ -0.68
TRAPPC12-218ENST00000479897 CCNOP22674 350 aa10.82□□□□□ -0.68
TRAPPC12-218ENST00000479897 ANOS1P23352 680 aa10.82□□□□□ -0.68
TRAPPC12-218ENST00000479897 PSMB10P40306 273 aa10.82□□□□□ -0.68
TRAPPC12-218ENST00000479897 RAD52P43351 418 aa10.82□□□□□ -0.68
TRAPPC12-218ENST00000479897 KIR3DL2P43630 455 aa10.82□□□□□ -0.68
TRAPPC12-218ENST00000479897 UCP2P55851 309 aa10.82□□□□□ -0.68
TRAPPC12-218ENST00000479897 NANOS3P60323 173 aaKnown RBP10.82□□□□□ -0.68
TRAPPC12-218ENST00000479897 RPS23P62266 143 aaKnown RBP10.82□□□□□ -0.68
TRAPPC12-218ENST00000479897 SPOCK1Q08629 439 aa10.82□□□□□ -0.68
TRAPPC12-218ENST00000479897 GPR50Q13585 617 aa10.82□□□□□ -0.68
TRAPPC12-218ENST00000479897 MED22Q15528 200 aa10.82□□□□□ -0.68
TRAPPC12-218ENST00000479897 WDR38Q5JTN6 314 aa10.82□□□□□ -0.68
TRAPPC12-218ENST00000479897 SYT6Q5T7P8 510 aaPredicted RBP10.82□□□□□ -0.68
TRAPPC12-218ENST00000479897 BCL2L15Q5TBC7 163 aa10.82□□□□□ -0.68
TRAPPC12-218ENST00000479897 DMKNQ6E0U4 476 aaPredicted RBP10.82□□□□□ -0.68
TRAPPC12-218ENST00000479897 ALKBH2Q6NS38 261 aa10.82□□□□□ -0.68
TRAPPC12-218ENST00000479897 PRSS35Q8N3Z0 413 aa10.82□□□□□ -0.68
TRAPPC12-218ENST00000479897 MUL1Q969V5 352 aa10.82□□□□□ -0.68
TRAPPC12-218ENST00000479897 SPSB4Q96A44 273 aa10.82□□□□□ -0.68
TRAPPC12-218ENST00000479897 SMIM19Q96E16 107 aa10.82□□□□□ -0.68
TRAPPC12-218ENST00000479897 OPALINQ96PE5 141 aa10.82□□□□□ -0.68
TRAPPC12-218ENST00000479897 PSMG3-AS1Q96PY0 264 aa10.82□□□□□ -0.68
TRAPPC12-218ENST00000479897 PBOV1Q9GZY1 135 aa10.82□□□□□ -0.68
TRAPPC12-218ENST00000479897 OR10A2Q9H208 303 aa10.82□□□□□ -0.68
TRAPPC12-218ENST00000479897 ZNF442Q9H7R0 627 aa10.82□□□□□ -0.68
TRAPPC12-218ENST00000479897 OR52A1Q9UKL2 312 aa10.82□□□□□ -0.68
TRAPPC12-218ENST00000479897 RNF115Q9Y4L5 304 aa10.82□□□□□ -0.68
TRAPPC12-218ENST00000479897 SPEF1Q9Y4P9 236 aa10.82□□□□□ -0.68
TRAPPC12-218ENST00000479897 ABCA4P78363 2273 aa10.82□□□□□ -0.68
TRAPPC12-218ENST00000479897 RAI1Q7Z5J4 1906 aaPredicted RBP10.82□□□□□ -0.68
TRAPPC12-218ENST00000479897 TMEM212A6NML5 194 aa10.81□□□□□ -0.68
TRAPPC12-218ENST00000479897 A6NNC1 897 aa10.81□□□□□ -0.68
TRAPPC12-218ENST00000479897 SHISA9B4DS77 424 aa10.81□□□□□ -0.68
TRAPPC12-218ENST00000479897 PLPP2O43688 288 aa10.81□□□□□ -0.68
TRAPPC12-218ENST00000479897 NGFP01138 241 aa10.81□□□□□ -0.68
TRAPPC12-218ENST00000479897 TTRP02766 147 aa10.81□□□□□ -0.68
TRAPPC12-218ENST00000479897 LCATP04180 440 aa10.81□□□□□ -0.68
TRAPPC12-218ENST00000479897 ISG15P05161 165 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms