RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 BAP18Q8IXM2 172 aa11.89□□□□□ -0.51
PDZRN3-208ENST00000479530 ZNF563Q8TA94 476 aa11.89□□□□□ -0.51
PDZRN3-208ENST00000479530 ZFP57Q9NU63 452 aa11.89□□□□□ -0.51
PDZRN3-208ENST00000479530 COL4A2P08572 1712 aa11.89□□□□□ -0.51
PDZRN3-208ENST00000479530 MUC3AQ02505 3323 aa11.89□□□□□ -0.51
PDZRN3-208ENST00000479530 F8VVB4 439 aa11.89□□□□□ -0.51
PDZRN3-208ENST00000479530 F8VWA3 439 aa11.89□□□□□ -0.51
PDZRN3-208ENST00000479530 EFSO43281 561 aa11.89□□□□□ -0.51
PDZRN3-208ENST00000479530 ZNF264O43296 627 aa11.89□□□□□ -0.51
PDZRN3-208ENST00000479530 APOC1P02654 83 aa11.89□□□□□ -0.51
PDZRN3-208ENST00000479530 PNMTP11086 282 aa11.89□□□□□ -0.51
PDZRN3-208ENST00000479530 CBR1P16152 277 aa11.89□□□□□ -0.51
PDZRN3-208ENST00000479530 CTLA4P16410 223 aa11.89□□□□□ -0.51
PDZRN3-208ENST00000479530 PSMB6P28072 239 aa11.89□□□□□ -0.51
PDZRN3-208ENST00000479530 ZNF117Q03924 483 aa11.89□□□□□ -0.51
PDZRN3-208ENST00000479530 GFOD2Q3B7J2 385 aa11.89□□□□□ -0.51
PDZRN3-208ENST00000479530 ARL11Q969Q4 196 aa11.89□□□□□ -0.51
PDZRN3-208ENST00000479530 CNTNAP3BQ96NU0 1288 aa11.89□□□□□ -0.51
PDZRN3-208ENST00000479530 HRH4Q9H3N8 390 aa11.89□□□□□ -0.51
PDZRN3-208ENST00000479530 CKLFQ9UBR5 152 aa11.89□□□□□ -0.51
PDZRN3-208ENST00000479530 LRP12Q9Y561 859 aa11.89□□□□□ -0.51
PDZRN3-208ENST00000479530 THADAQ6YHU6 1953 aa11.88□□□□□ -0.51
PDZRN3-208ENST00000479530 RAB27BO00194 218 aa11.88□□□□□ -0.51
PDZRN3-208ENST00000479530 SCDO00767 359 aa11.88□□□□□ -0.51
PDZRN3-208ENST00000479530 HCRTR2O43614 444 aa11.88□□□□□ -0.51
PDZRN3-208ENST00000479530 GUSBP08236 651 aa11.88□□□□□ -0.51
PDZRN3-208ENST00000479530 RORAP35398 523 aa11.88□□□□□ -0.51
PDZRN3-208ENST00000479530 PTGFRP43088 359 aa11.88□□□□□ -0.51
PDZRN3-208ENST00000479530 INSM1Q01101 510 aaPredicted RBP11.88□□□□□ -0.51
PDZRN3-208ENST00000479530 AIMP2Q13155 320 aaKnown RBP11.88□□□□□ -0.51
PDZRN3-208ENST00000479530 RBM39Q14498 530 aaKnown RBP11.88□□□□□ -0.51
PDZRN3-208ENST00000479530 TOMM20Q15388 145 aa11.88□□□□□ -0.51
PDZRN3-208ENST00000479530 RBMS3Q6XE24 437 aaKnown RBP11.88□□□□□ -0.51
PDZRN3-208ENST00000479530 SLC29A4Q7RTT9 530 aa11.88□□□□□ -0.51
PDZRN3-208ENST00000479530 SLC30A7Q8NEW0 376 aa11.88□□□□□ -0.51
PDZRN3-208ENST00000479530 DMBX1Q8NFW5 382 aa11.88□□□□□ -0.51
PDZRN3-208ENST00000479530 STOML3Q8TAV4 291 aa11.88□□□□□ -0.51
PDZRN3-208ENST00000479530 NANPQ8TBE9 248 aa11.88□□□□□ -0.51
PDZRN3-208ENST00000479530 AQP3Q92482 292 aa11.88□□□□□ -0.51
PDZRN3-208ENST00000479530 C8orf44Q96CB5 159 aa11.88□□□□□ -0.51
PDZRN3-208ENST00000479530 SLC25A36Q96CQ1 311 aa11.88□□□□□ -0.51
PDZRN3-208ENST00000479530 ZNF285Q96NJ3 590 aa11.88□□□□□ -0.51
PDZRN3-208ENST00000479530 EMC9Q9Y3B6 208 aa11.88□□□□□ -0.51
PDZRN3-208ENST00000479530 IL33O95760 270 aa11.88□□□□□ -0.51
PDZRN3-208ENST00000479530 DDAH2O95865 285 aa11.88□□□□□ -0.51
PDZRN3-208ENST00000479530 TPT1P13693 172 aaKnown RBP11.88□□□□□ -0.51
PDZRN3-208ENST00000479530 MUC1P15941 1255 aaPredicted RBP11.88□□□□□ -0.51
PDZRN3-208ENST00000479530 SNRPEP62304 92 aaKnown RBP11.88□□□□□ -0.51
PDZRN3-208ENST00000479530 ZNF260Q3ZCT1 412 aa11.88□□□□□ -0.51
PDZRN3-208ENST00000479530 EMC4Q5J8M3 183 aa11.88□□□□□ -0.51
PDZRN3-208ENST00000479530 AVPI1Q5T686 147 aa11.88□□□□□ -0.51
PDZRN3-208ENST00000479530 C1orf189Q5VU69 101 aa11.88□□□□□ -0.51
PDZRN3-208ENST00000479530 SLC16A13Q7RTY0 426 aa11.88□□□□□ -0.51
PDZRN3-208ENST00000479530 KDM8Q8N371 416 aa11.88□□□□□ -0.51
PDZRN3-208ENST00000479530 CHST4Q8NCG5 386 aa11.88□□□□□ -0.51
PDZRN3-208ENST00000479530 OR2I1PQ8NGU4 316 aa11.88□□□□□ -0.51
PDZRN3-208ENST00000479530 PRRT1Q99946 306 aa11.88□□□□□ -0.51
PDZRN3-208ENST00000479530 ABHD6Q9BV23 337 aa11.88□□□□□ -0.51
PDZRN3-208ENST00000479530 SLCO5A1Q9H2Y9 848 aa11.88□□□□□ -0.51
PDZRN3-208ENST00000479530 GDF2Q9UK05 429 aaPredicted RBP11.88□□□□□ -0.51
PDZRN3-208ENST00000479530 RHBDD3Q9Y3P4 386 aa11.88□□□□□ -0.51
PDZRN3-208ENST00000479530 TEX13DA0A0J9YY54 714 aaPredicted RBP11.87□□□□□ -0.51
PDZRN3-208ENST00000479530 C2orf72A6NCS6 295 aa11.87□□□□□ -0.51
PDZRN3-208ENST00000479530 ABOP16442 354 aa11.87□□□□□ -0.51
PDZRN3-208ENST00000479530 GNB3P16520 340 aa11.87□□□□□ -0.51
PDZRN3-208ENST00000479530 OR1D5P58170 312 aa11.87□□□□□ -0.51
PDZRN3-208ENST00000479530 CFHR1Q03591 330 aa11.87□□□□□ -0.51
PDZRN3-208ENST00000479530 SMAD2Q15796 467 aaKnown RBP11.87□□□□□ -0.51
PDZRN3-208ENST00000479530 CATSPERDQ86XM0 798 aa11.87□□□□□ -0.51
PDZRN3-208ENST00000479530 NUBPLQ8TB37 319 aa11.87□□□□□ -0.51
PDZRN3-208ENST00000479530 MARCH1Q8TCQ1 289 aa11.87□□□□□ -0.51
PDZRN3-208ENST00000479530 RNF141Q8WVD5 230 aa11.87□□□□□ -0.51
PDZRN3-208ENST00000479530 ADIPOR1Q96A54 375 aa11.87□□□□□ -0.51
PDZRN3-208ENST00000479530 FBXO17Q96EF6 278 aa11.87□□□□□ -0.51
PDZRN3-208ENST00000479530 ZNF587Q96SQ5 575 aaPredicted RBP11.87□□□□□ -0.51
PDZRN3-208ENST00000479530 OR2S2Q9NQN1 319 aa11.87□□□□□ -0.51
PDZRN3-208ENST00000479530 SLC2A8Q9NY64 477 aa11.87□□□□□ -0.51
PDZRN3-208ENST00000479530 UNC13CQ8NB66 2214 aa11.87□□□□□ -0.51
PDZRN3-208ENST00000479530 IGHV1OR15-9A0A0B4J2B8 117 aa11.87□□□□□ -0.51
PDZRN3-208ENST00000479530 TTLL8A6PVC2 850 aa11.87□□□□□ -0.51
PDZRN3-208ENST00000479530 C9JQL5 133 aa11.87□□□□□ -0.51
PDZRN3-208ENST00000479530 ADAP1O75689 374 aa11.87□□□□□ -0.51
PDZRN3-208ENST00000479530 SNAPINO95295 136 aa11.87□□□□□ -0.51
PDZRN3-208ENST00000479530 IGLV3-19P01714 112 aa11.87□□□□□ -0.51
PDZRN3-208ENST00000479530 PMP2P02689 132 aa11.87□□□□□ -0.51
PDZRN3-208ENST00000479530 S100A6P06703 90 aa11.87□□□□□ -0.51
PDZRN3-208ENST00000479530 CD2P06729 351 aa11.87□□□□□ -0.51
PDZRN3-208ENST00000479530 BTF3P20290 206 aaKnown RBP11.87□□□□□ -0.51
PDZRN3-208ENST00000479530 AKR1C3P42330 323 aa11.87□□□□□ -0.51
PDZRN3-208ENST00000479530 FASLGP48023 281 aa11.87□□□□□ -0.51
PDZRN3-208ENST00000479530 BLKP51451 505 aa11.87□□□□□ -0.51
PDZRN3-208ENST00000479530 NR0B1P51843 470 aaKnown RBP11.87□□□□□ -0.51
PDZRN3-208ENST00000479530 UNC119Q13432 240 aa11.87□□□□□ -0.51
PDZRN3-208ENST00000479530 ACKR1Q16570 336 aa11.87□□□□□ -0.51
PDZRN3-208ENST00000479530 SWI5Q1ZZU3 235 aa11.87□□□□□ -0.51
PDZRN3-208ENST00000479530 AKIRIN2Q53H80 203 aa11.87□□□□□ -0.51
PDZRN3-208ENST00000479530 SLC18B1Q6NT16 456 aa11.87□□□□□ -0.51
PDZRN3-208ENST00000479530 RNF144BQ7Z419 303 aa11.87□□□□□ -0.51
PDZRN3-208ENST00000479530 OR13C3Q8NGS6 347 aa11.87□□□□□ -0.51
PDZRN3-208ENST00000479530 ZNF721Q8TF20 911 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms