RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 KLHL13Q9P2N7 655 aa9.59□□□□□ -0.87
VPS52-217ENST00000478934 MYOTQ9UBF9 498 aa9.59□□□□□ -0.87
VPS52-217ENST00000478934 NCOA6Q14686 2063 aaPredicted RBP9.59□□□□□ -0.87
VPS52-217ENST00000478934 COL5A1P20908 1838 aaPredicted RBP9.59□□□□□ -0.87
VPS52-217ENST00000478934 IGLV3-12A0A075B6K2 115 aa9.59□□□□□ -0.87
VPS52-217ENST00000478934 IGHV3-15A0A0B4J1V0 119 aa9.59□□□□□ -0.87
VPS52-217ENST00000478934 A6NIZ1 184 aa9.59□□□□□ -0.87
VPS52-217ENST00000478934 OR6C65A6NJZ3 312 aa9.59□□□□□ -0.87
VPS52-217ENST00000478934 CCDC85CA6NKD9 419 aa9.59□□□□□ -0.87
VPS52-217ENST00000478934 APOC3P02656 99 aa9.59□□□□□ -0.87
VPS52-217ENST00000478934 VSIG8P0DPA2 414 aa9.59□□□□□ -0.87
VPS52-217ENST00000478934 FSTP19883 344 aa9.59□□□□□ -0.87
VPS52-217ENST00000478934 VAMP1P23763 118 aa9.59□□□□□ -0.87
VPS52-217ENST00000478934 ZNF41P51814 821 aaPredicted RBP9.59□□□□□ -0.87
VPS52-217ENST00000478934 LUMP51884 338 aaPredicted RBP9.59□□□□□ -0.87
VPS52-217ENST00000478934 CAPZA1P52907 286 aa9.59□□□□□ -0.87
VPS52-217ENST00000478934 ATP1B3P54709 279 aa9.59□□□□□ -0.87
VPS52-217ENST00000478934 CLDN6P56747 220 aa9.59□□□□□ -0.87
VPS52-217ENST00000478934 SCAND1P57086 179 aa9.59□□□□□ -0.87
VPS52-217ENST00000478934 ACTBP60709 375 aa9.59□□□□□ -0.87
VPS52-217ENST00000478934 RAP1BP61224 184 aa9.59□□□□□ -0.87
VPS52-217ENST00000478934 RAP1AP62834 184 aa9.59□□□□□ -0.87
VPS52-217ENST00000478934 ACTG1P63261 375 aa9.59□□□□□ -0.87
VPS52-217ENST00000478934 CXADRP78310 365 aa9.59□□□□□ -0.87
VPS52-217ENST00000478934 DCDP81605 110 aaKnown RBP9.59□□□□□ -0.87
VPS52-217ENST00000478934 ZP4Q12836 540 aa9.59□□□□□ -0.87
VPS52-217ENST00000478934 TMEM176BQ3YBM2 270 aaPredicted RBP9.59□□□□□ -0.87
VPS52-217ENST00000478934 KCTD9Q7L273 389 aa9.59□□□□□ -0.87
VPS52-217ENST00000478934 CPEB2Q7Z5Q1 589 aaKnown RBP9.59□□□□□ -0.87
VPS52-217ENST00000478934 TRAPPC6BQ86SZ2 158 aa9.59□□□□□ -0.87
VPS52-217ENST00000478934 COMMD2Q86X83 199 aa9.59□□□□□ -0.87
VPS52-217ENST00000478934 SPEM1Q8N4L4 309 aa9.59□□□□□ -0.87
VPS52-217ENST00000478934 ADAD2Q8NCV1 583 aaKnown RBP9.59□□□□□ -0.87
VPS52-217ENST00000478934 TMEM104Q8NE00 496 aa9.59□□□□□ -0.87
VPS52-217ENST00000478934 OR10H5Q8NGA6 315 aa9.59□□□□□ -0.87
VPS52-217ENST00000478934 SLC39A7Q92504 469 aa9.59□□□□□ -0.87
VPS52-217ENST00000478934 CCDC74BQ96LY2 380 aa9.59□□□□□ -0.87
VPS52-217ENST00000478934 ASH2LQ9UBL3 628 aa9.59□□□□□ -0.87
VPS52-217ENST00000478934 PFDN2Q9UHV9 154 aa9.59□□□□□ -0.87
VPS52-217ENST00000478934 MRPS17Q9Y2R5 130 aaKnown RBP9.59□□□□□ -0.87
VPS52-217ENST00000478934 ADAMTS20P59510 1910 aa9.59□□□□□ -0.87
VPS52-217ENST00000478934 OR5H14A6NHG9 310 aa9.58□□□□□ -0.88
VPS52-217ENST00000478934 HMSDA8MTL9 139 aa9.58□□□□□ -0.88
VPS52-217ENST00000478934 ISG15P05161 165 aa9.58□□□□□ -0.88
VPS52-217ENST00000478934 AKR1C4P17516 323 aa9.58□□□□□ -0.88
VPS52-217ENST00000478934 C4BPBP20851 252 aa9.58□□□□□ -0.88
VPS52-217ENST00000478934 ZP3P21754 424 aa9.58□□□□□ -0.88
VPS52-217ENST00000478934 MPGP29372 298 aa9.58□□□□□ -0.88
VPS52-217ENST00000478934 P2RY4P51582 365 aa9.58□□□□□ -0.88
VPS52-217ENST00000478934 AKR1C2P52895 323 aa9.58□□□□□ -0.88
VPS52-217ENST00000478934 CLRN1P58418 232 aa9.58□□□□□ -0.88
VPS52-217ENST00000478934 STARD6P59095 220 aa9.58□□□□□ -0.88
VPS52-217ENST00000478934 AKR1C1Q04828 323 aa9.58□□□□□ -0.88
VPS52-217ENST00000478934 PPP1R1AQ13522 171 aa9.58□□□□□ -0.88
VPS52-217ENST00000478934 ZNF584Q8IVC4 421 aa9.58□□□□□ -0.88
VPS52-217ENST00000478934 WDSUB1Q8N9V3 476 aa9.58□□□□□ -0.88
VPS52-217ENST00000478934 ZNF775Q96BV0 537 aaPredicted RBP9.58□□□□□ -0.88
VPS52-217ENST00000478934 FAM71F1Q96KD3 344 aaPredicted RBP9.58□□□□□ -0.88
VPS52-217ENST00000478934 MRPL13Q9BYD1 178 aaKnown RBP9.58□□□□□ -0.88
VPS52-217ENST00000478934 POTEKPQ9BYX7 375 aa9.58□□□□□ -0.88
VPS52-217ENST00000478934 SELENOIQ9C0D9 397 aa9.58□□□□□ -0.88
VPS52-217ENST00000478934 CST11Q9H112 138 aa9.58□□□□□ -0.88
VPS52-217ENST00000478934 POLR1DQ9Y2S0 133 aa9.58□□□□□ -0.88
VPS52-217ENST00000478934 EXPH5Q8NEV8 1989 aa9.58□□□□□ -0.88
VPS52-217ENST00000478934 A0A1B0GTI1 187 aa9.58□□□□□ -0.88
VPS52-217ENST00000478934 EEF1E1-BLOC1S5C9J1V9 151 aa9.58□□□□□ -0.88
VPS52-217ENST00000478934 B3GALNT1O75752 331 aa9.58□□□□□ -0.88
VPS52-217ENST00000478934 AQP8O94778 261 aa9.58□□□□□ -0.88
VPS52-217ENST00000478934 PMP2P02689 132 aa9.58□□□□□ -0.88
VPS52-217ENST00000478934 CD34P28906 385 aa9.58□□□□□ -0.88
VPS52-217ENST00000478934 BDKRB2P30411 391 aa9.58□□□□□ -0.88
VPS52-217ENST00000478934 HRH1P35367 487 aa9.58□□□□□ -0.88
VPS52-217ENST00000478934 CXCL12P48061 93 aa9.58□□□□□ -0.88
VPS52-217ENST00000478934 C1orf100Q5SVJ3 147 aa9.58□□□□□ -0.88
VPS52-217ENST00000478934 PHF19Q5T6S3 580 aa9.58□□□□□ -0.88
VPS52-217ENST00000478934 TMEM244Q5VVB8 128 aa9.58□□□□□ -0.88
VPS52-217ENST00000478934 UNQ6126/PRO20091Q6UXV3 157 aa9.58□□□□□ -0.88
VPS52-217ENST00000478934 ZNF704Q6ZNC4 412 aaPredicted RBP9.58□□□□□ -0.88
VPS52-217ENST00000478934 RABEPKQ7Z6M1 372 aa9.58□□□□□ -0.88
VPS52-217ENST00000478934 ANGPTL5Q86XS5 388 aa9.58□□□□□ -0.88
VPS52-217ENST00000478934 CDH26Q8IXH8 852 aa9.58□□□□□ -0.88
VPS52-217ENST00000478934 TMEM229BQ8NBD8 167 aa9.58□□□□□ -0.88
VPS52-217ENST00000478934 OR1M1Q8NGA1 313 aa9.58□□□□□ -0.88
VPS52-217ENST00000478934 NPRL2Q8WTW4 380 aa9.58□□□□□ -0.88
VPS52-217ENST00000478934 ZC3H10Q96K80 434 aaKnown RBP9.58□□□□□ -0.88
VPS52-217ENST00000478934 BANF2Q9H503 90 aa9.58□□□□□ -0.88
VPS52-217ENST00000478934 SLC17A5Q9NRA2 495 aa9.58□□□□□ -0.88
VPS52-217ENST00000478934 ALKBH4Q9NXW9 302 aa9.58□□□□□ -0.88
VPS52-217ENST00000478934 RARRES3Q9UL19 164 aa9.58□□□□□ -0.88
VPS52-217ENST00000478934 SRPK3Q9UPE1 567 aa9.58□□□□□ -0.88
VPS52-217ENST00000478934 A0A0A6YYD4 124 aa9.57□□□□□ -0.88
VPS52-217ENST00000478934 CD37P11049 281 aa9.57□□□□□ -0.88
VPS52-217ENST00000478934 PI3P19957 117 aa9.57□□□□□ -0.88
VPS52-217ENST00000478934 LAP3P28838 519 aa9.57□□□□□ -0.88
VPS52-217ENST00000478934 MMP16P51512 607 aa9.57□□□□□ -0.88
VPS52-217ENST00000478934 GMFBP60983 142 aa9.57□□□□□ -0.88
VPS52-217ENST00000478934 ZNF260Q3ZCT1 412 aa9.57□□□□□ -0.88
VPS52-217ENST00000478934 ZNF385CQ66K41 422 aaPredicted RBP9.57□□□□□ -0.88
VPS52-217ENST00000478934 DNM1P34Q6PK57 102 aa9.57□□□□□ -0.88
VPS52-217ENST00000478934 TMPPEQ6ZT21 453 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms