RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 WHAMMP3Q1A5X7 153 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 NSUN5P1Q3KNT7 163 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 TPRG1LQ5T0D9 272 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 HENMT1Q5T8I9 393 aaKnown RBP2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 OR2G6Q5TZ20 316 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 LRRC66Q68CR7 880 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 OR52E8Q6IFG1 317 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 GUSBP11Q6P575 273 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 VRK2Q86Y07 508 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 TGIF2LXQ8IUE1 241 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 CDKL3Q8IVW4 592 aaPredicted RBP2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 SYCE1Q8N0S2 351 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 SLC25A45Q8N413 288 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 TRAM1L1Q8N609 369 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 LMX1AQ8TE12 382 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 C7orf33Q8WU49 177 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 PIH1D2Q8WWB5 315 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 TMEM159Q96B96 161 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 LRRC45Q96CN5 670 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 HAUS1Q96CS2 278 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 IMP4Q96G21 291 aaKnown RBP2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 TIMD4Q96H15 378 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 LINC00167Q96N53 147 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 ZNF578Q96N58 590 aaPredicted RBP2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 OR2M4Q96R27 311 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 TRIB3Q96RU7 358 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 HIST1H4GQ99525 98 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 MAPKAP1Q9BPZ7 522 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 TSGA10Q9BZW7 698 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 ROPN1BQ9BZX4 212 aaPredicted RBP2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 GBA3Q9H227 469 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 RBKSQ9H477 322 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 TRABDQ9H4I3 376 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 FOLH1BQ9HBA9 442 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 SH2D2AQ9NP31 389 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 POLE4Q9NR33 117 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 RBM22Q9NW64 420 aaKnown RBP eCLIP2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 CD274Q9NZQ7 290 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 B4GALT7Q9UBV7 327 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 SEC14L3Q9UDX4 400 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 RABL2BQ9UNT1 228 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 SLC17A4Q9Y2C5 497 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 UGT2A1Q9Y4X1 527 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 NPTNQ9Y639 398 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 CACNA1GO43497 2377 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 ITPR1Q14643 2758 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 FREM2Q5SZK8 3169 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 CHD6Q8TD26 2715 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 IGHV3OR16-13A0A075B7E8 117 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 IGKV1D-8A0A087WSZ0 117 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 C1orf232A0A0U1RR37 186 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 IQANK1A0A1B0GTG1 560 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 TCRBV9S1A1TA0A576 114 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 XKRY2A2RUG3 117 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 OR5K4A6NMS3 321 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 LOC110117498-PIK3R3F6TDL0 507 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 GFYI3L273 518 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 FOXE1O00358 373 aaPredicted RBP2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 ZZEF1O43149 2961 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 UGT1A9O60656 530 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 CST8O60676 142 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 CD82P27701 267 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 CASQ1P31415 396 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 SPAM1P38567 509 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 KIR2DS4P43632 304 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 GPR1P46091 355 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 SPINT3P49223 89 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 ATP5IP56385 69 aaPredicted RBP2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 RWDD2BP57060 319 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 ZSCAN26Q16670 478 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 DUSP7Q16829 419 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 DEFB133Q30KQ1 61 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 DMRTC1Q5HYR2 192 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 OR2A2Q6IF42 318 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 Q6ZVH6 145 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 PGAP1Q75T13 922 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 FAM220AQ7Z4H9 259 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 TMEM179BQ7Z7N9 219 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 NT5DC3Q86UY8 548 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 EGFL6Q8IUX8 553 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 RDH10Q8IZV5 341 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 FTMTQ8N4E7 242 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 TMEM252Q8N6L7 170 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 UBL4BQ8N7F7 174 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 OR52H1Q8NGJ2 320 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 OR52I1Q8NGK6 324 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 OR1L4Q8NGR5 311 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 BRSK1Q8TDC3 778 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 PDCD6IPQ8WUM4 868 aaKnown RBP2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 DNAJA4Q8WW22 397 aaPredicted RBP2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 UFD1Q92890 307 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 CXorf40BQ96DE9 158 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 C16orf74Q96GX8 76 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 TPD52L3Q96J77 140 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 MAGEB18Q96M61 343 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 OXGR1Q96P68 337 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 KCNA7Q96RP8 456 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 ARHGDIGQ99819 225 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms