RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 CPNE4Q96A23 557 aaPredicted RBP12.78□□□□□ -0.36
NPHP4-208ENST00000478423 BARHL1Q9BZE3 327 aa12.78□□□□□ -0.36
NPHP4-208ENST00000478423 SLC25A31Q9H0C2 315 aa12.78□□□□□ -0.36
NPHP4-208ENST00000478423 KLK11Q9UBX7 282 aa12.78□□□□□ -0.36
NPHP4-208ENST00000478423 COLQQ9Y215 455 aaPredicted RBP12.78□□□□□ -0.36
NPHP4-208ENST00000478423 A0A0B4J2A0 478 aa12.78□□□□□ -0.36
NPHP4-208ENST00000478423 SDCBPO00560 298 aaPredicted RBP12.78□□□□□ -0.36
NPHP4-208ENST00000478423 PRRG2O14669 202 aa12.78□□□□□ -0.36
NPHP4-208ENST00000478423 FAHP16930 419 aa12.78□□□□□ -0.36
NPHP4-208ENST00000478423 EDDM3AQ14507 147 aa12.78□□□□□ -0.36
NPHP4-208ENST00000478423 WDR74Q6RFH5 385 aaPredicted RBP12.78□□□□□ -0.36
NPHP4-208ENST00000478423 CCDC190Q86UF4 302 aa12.78□□□□□ -0.36
NPHP4-208ENST00000478423 ZNF687Q8N1G0 1237 aa12.78□□□□□ -0.36
NPHP4-208ENST00000478423 OR5T1Q8NG75 326 aa12.78□□□□□ -0.36
NPHP4-208ENST00000478423 HRH4Q9H3N8 390 aa12.78□□□□□ -0.36
NPHP4-208ENST00000478423 SPACA1Q9HBV2 294 aa12.78□□□□□ -0.36
NPHP4-208ENST00000478423 ADGRL4Q9HBW9 690 aa12.78□□□□□ -0.36
NPHP4-208ENST00000478423 SHPKQ9UHJ6 478 aa12.78□□□□□ -0.36
NPHP4-208ENST00000478423 CES1P1Q9UKY3 287 aa12.78□□□□□ -0.36
NPHP4-208ENST00000478423 BRCA1P38398 1863 aaKnown RBP12.78□□□□□ -0.36
NPHP4-208ENST00000478423 ARID2Q68CP9 1835 aa12.78□□□□□ -0.36
NPHP4-208ENST00000478423 RBBP6Q7Z6E9 1792 aaKnown RBP12.78□□□□□ -0.36
NPHP4-208ENST00000478423 D6RAR5 112 aa12.78□□□□□ -0.36
NPHP4-208ENST00000478423 PLPP2O43688 288 aa12.78□□□□□ -0.36
NPHP4-208ENST00000478423 CD3DP04234 171 aa12.78□□□□□ -0.36
NPHP4-208ENST00000478423 ATF1P18846 271 aa12.78□□□□□ -0.36
NPHP4-208ENST00000478423 PCMT1P22061 227 aa12.78□□□□□ -0.36
NPHP4-208ENST00000478423 ZNF136P52737 540 aa12.78□□□□□ -0.36
NPHP4-208ENST00000478423 FUT7Q11130 342 aa12.78□□□□□ -0.36
NPHP4-208ENST00000478423 ELFN2Q5R3F8 820 aa12.78□□□□□ -0.36
NPHP4-208ENST00000478423 KANSL1Q7Z3B3 1105 aa12.78□□□□□ -0.36
NPHP4-208ENST00000478423 RDH5Q92781 318 aa12.78□□□□□ -0.36
NPHP4-208ENST00000478423 TMEM68Q96MH6 324 aa12.78□□□□□ -0.36
NPHP4-208ENST00000478423 AKAP6Q13023 2319 aa12.78□□□□□ -0.36
NPHP4-208ENST00000478423 HS3ST1O14792 307 aa12.78□□□□□ -0.36
NPHP4-208ENST00000478423 FADS1O60427 444 aa12.78□□□□□ -0.36
NPHP4-208ENST00000478423 CTLA4P16410 223 aa12.78□□□□□ -0.36
NPHP4-208ENST00000478423 DCTDP32321 178 aa12.78□□□□□ -0.36
NPHP4-208ENST00000478423 CSRP3P50461 194 aa12.78□□□□□ -0.36
NPHP4-208ENST00000478423 SLC37A1P57057 533 aa12.78□□□□□ -0.36
NPHP4-208ENST00000478423 FZD5Q13467 585 aa12.78□□□□□ -0.36
NPHP4-208ENST00000478423 ZXDCQ2QGD7 858 aaPredicted RBP12.78□□□□□ -0.36
NPHP4-208ENST00000478423 DND1Q8IYX4 353 aaKnown RBP12.78□□□□□ -0.36
NPHP4-208ENST00000478423 C17orf47Q8NEP4 570 aa12.78□□□□□ -0.36
NPHP4-208ENST00000478423 RAB39BQ96DA2 213 aa12.78□□□□□ -0.36
NPHP4-208ENST00000478423 KIRREL1Q96J84 757 aa12.78□□□□□ -0.36
NPHP4-208ENST00000478423 FOXB1Q99853 325 aa12.78□□□□□ -0.36
NPHP4-208ENST00000478423 DUSP15Q9H1R2 295 aaPredicted RBP12.78□□□□□ -0.36
NPHP4-208ENST00000478423 KCNJ16Q9NPI9 418 aa12.78□□□□□ -0.36
NPHP4-208ENST00000478423 TMEM265A0A087WTH1 108 aa12.77□□□□□ -0.36
NPHP4-208ENST00000478423 SLC17A2O00624 439 aa12.77□□□□□ -0.36
NPHP4-208ENST00000478423 CCSO14618 274 aa12.77□□□□□ -0.36
NPHP4-208ENST00000478423 PPP3CBP16298 524 aa12.77□□□□□ -0.36
NPHP4-208ENST00000478423 WDR38Q5JTN6 314 aa12.77□□□□□ -0.36
NPHP4-208ENST00000478423 SLC22A18ASQ8N1D0 253 aa12.77□□□□□ -0.36
NPHP4-208ENST00000478423 OR5H6Q8NGV6 325 aa12.77□□□□□ -0.36
NPHP4-208ENST00000478423 NKX3-1Q99801 234 aaPredicted RBP12.77□□□□□ -0.36
NPHP4-208ENST00000478423 PLEKHA3Q9HB20 300 aa12.77□□□□□ -0.36
NPHP4-208ENST00000478423 A0A1B0GTH9 108 aa12.77□□□□□ -0.37
NPHP4-208ENST00000478423 FAM221AA4D161 298 aa12.77□□□□□ -0.37
NPHP4-208ENST00000478423 SLC22A20A6NK97 555 aa12.77□□□□□ -0.37
NPHP4-208ENST00000478423 MKRN2OSH3BPM6 223 aa12.77□□□□□ -0.37
NPHP4-208ENST00000478423 DEGS1O15121 323 aa12.77□□□□□ -0.37
NPHP4-208ENST00000478423 CT45A8P0DMV1 189 aa12.77□□□□□ -0.37
NPHP4-208ENST00000478423 CT45A9P0DMV2 189 aa12.77□□□□□ -0.37
NPHP4-208ENST00000478423 DDOSTP39656 456 aa12.77□□□□□ -0.37
NPHP4-208ENST00000478423 SIGLEC14Q08ET2 396 aa12.77□□□□□ -0.37
NPHP4-208ENST00000478423 CT45A2Q5DJT8 189 aa12.77□□□□□ -0.37
NPHP4-208ENST00000478423 VASH2Q86V25 355 aa12.77□□□□□ -0.37
NPHP4-208ENST00000478423 CCDC71Q8IV32 467 aaPredicted RBP12.77□□□□□ -0.37
NPHP4-208ENST00000478423 ZNF321PQ8N8H1 164 aa12.77□□□□□ -0.37
NPHP4-208ENST00000478423 PLPP5Q8NEB5 264 aa12.77□□□□□ -0.37
NPHP4-208ENST00000478423 NUBPLQ8TB37 319 aa12.77□□□□□ -0.37
NPHP4-208ENST00000478423 REEP6Q96HR9 211 aa12.77□□□□□ -0.37
NPHP4-208ENST00000478423 C4orf45Q96LM5 186 aa12.77□□□□□ -0.37
NPHP4-208ENST00000478423 CNTNAP3BQ96NU0 1288 aa12.77□□□□□ -0.37
NPHP4-208ENST00000478423 FAM173AQ9BQD7 235 aa12.77□□□□□ -0.37
NPHP4-208ENST00000478423 HRASLSQ9HDD0 168 aa12.77□□□□□ -0.37
NPHP4-208ENST00000478423 NECAP2Q9NVZ3 263 aa12.77□□□□□ -0.37
NPHP4-208ENST00000478423 FBXO7Q9Y3I1 522 aa12.77□□□□□ -0.37
NPHP4-208ENST00000478423 KIR2DS1A0A191URI9 304 aa12.77□□□□□ -0.37
NPHP4-208ENST00000478423 FAM157BP0CG42 384 aa12.77□□□□□ -0.37
NPHP4-208ENST00000478423 TRAPPC2P0DI81 140 aa12.77□□□□□ -0.37
NPHP4-208ENST00000478423 TRAPPC2BP0DI82 140 aa12.77□□□□□ -0.37
NPHP4-208ENST00000478423 RPA2P15927 270 aa12.77□□□□□ -0.37
NPHP4-208ENST00000478423 ARR3P36575 388 aa12.77□□□□□ -0.37
NPHP4-208ENST00000478423 MAGEB1P43366 347 aa12.77□□□□□ -0.37
NPHP4-208ENST00000478423 KIR2DS4P43632 304 aa12.77□□□□□ -0.37
NPHP4-208ENST00000478423 DYRK1AQ13627 763 aa12.77□□□□□ -0.37
NPHP4-208ENST00000478423 KIR2DS1Q14954 304 aa12.77□□□□□ -0.37
NPHP4-208ENST00000478423 OR2Y1Q8NGV0 311 aa12.77□□□□□ -0.37
NPHP4-208ENST00000478423 C10orf90Q96M02 699 aa12.77□□□□□ -0.37
NPHP4-208ENST00000478423 TSPAN32Q96QS1 320 aa12.77□□□□□ -0.37
NPHP4-208ENST00000478423 RASL10BQ96S79 203 aa12.77□□□□□ -0.37
NPHP4-208ENST00000478423 POFUT1Q9H488 388 aa12.77□□□□□ -0.37
NPHP4-208ENST00000478423 ZFP64Q9NPA5 681 aa12.77□□□□□ -0.37
NPHP4-208ENST00000478423 SLC52A3Q9NQ40 469 aa12.77□□□□□ -0.37
NPHP4-208ENST00000478423 LHX9Q9NQ69 397 aa12.77□□□□□ -0.37
NPHP4-208ENST00000478423 EXOSC3Q9NQT5 275 aaKnown RBP12.77□□□□□ -0.37
NPHP4-208ENST00000478423 CYSLTR2Q9NS75 346 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms