RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 CSF2RBP32927 897 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 PRSS3P35030 304 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 PTGS2P35354 604 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 APOBEC1P41238 236 aaKnown RBP4.4□□□□□ -1.71
SF3B6-202ENST00000478050 RAD52P43351 418 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 POU3F4P49335 361 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 MAP2K6P52564 334 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 EFNA3P52797 238 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 ACTBP60709 375 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 ZP1P60852 638 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 ACTG1P63261 375 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 ADAM8P78325 824 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 ACY1Q03154 408 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 GLO1Q04760 184 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 C17orf67Q0P5P2 114 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 EIF2B1Q14232 305 aaKnown RBP4.4□□□□□ -1.71
SF3B6-202ENST00000478050 UBXN2BQ14CS0 331 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 RBMS2Q15434 407 aaKnown RBP4.4□□□□□ -1.71
SF3B6-202ENST00000478050 CLPPQ16740 277 aaPredicted RBP4.4□□□□□ -1.71
SF3B6-202ENST00000478050 LGALSLQ3ZCW2 172 aaPredicted RBP4.4□□□□□ -1.71
SF3B6-202ENST00000478050 C4orf46Q504U0 113 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 ESCO2Q56NI9 601 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 TMEM255AQ5JRV8 349 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 CLLU1Q5K131 121 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 WDR45BQ5MNZ6 344 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 C1QTNF12Q5T7M4 302 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 C1orf189Q5VU69 101 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 C1QL3Q5VWW1 255 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 ZNF626Q68DY1 528 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 FAM166AQ6J272 317 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 SLC25A25Q6KCM7 469 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 MTFR2Q6P444 385 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 DEGS2Q6QHC5 323 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 WDR74Q6RFH5 385 aaPredicted RBP4.4□□□□□ -1.71
SF3B6-202ENST00000478050 TEX261Q6UWH6 196 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 ZNF704Q6ZNC4 412 aaPredicted RBP4.4□□□□□ -1.71
SF3B6-202ENST00000478050 Q6ZTK2 550 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 HDDC2Q7Z4H3 204 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 CXorf67Q86X51 503 aaPredicted RBP4.4□□□□□ -1.71
SF3B6-202ENST00000478050 CDH26Q8IXH8 852 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 UXS1Q8NBZ7 420 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 ZNF680Q8NEM1 530 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 OR11H4Q8NGC9 324 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 OR6M1Q8NGM8 313 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 OR2T35Q8NGX2 323 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 OR10AC1Q8NH08 325 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 OR8K3Q8NH51 312 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 OR52N5Q8NH56 324 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 MFSD8Q8NHS3 518 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 CEP76Q8TAP6 659 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 NUBPLQ8TB37 319 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 ADAMTS17Q8TE56 1095 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 DUSP19Q8WTR2 217 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 ASB10Q8WXI3 467 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 ASB13Q8WXK3 278 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 DNASE2BQ8WZ79 361 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 GCDHQ92947 438 aaPredicted RBP4.4□□□□□ -1.71
SF3B6-202ENST00000478050 FAM3DQ96BQ1 224 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 FOXRED1Q96CU9 486 aaPredicted RBP4.4□□□□□ -1.71
SF3B6-202ENST00000478050 TAAR9Q96RI9 348 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 AMELYQ99218 206 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 ABHD6Q9BV23 337 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 ZNF747Q9BV97 191 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 RTN4RQ9BZR6 473 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 SEMA4CQ9C0C4 833 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 SLC7A5P2Q9GIP4 190 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 SLCO5A1Q9H2Y9 848 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 ZNF768Q9H5H4 540 aaKnown RBP4.4□□□□□ -1.71
SF3B6-202ENST00000478050 METTL17Q9H7H0 456 aaPredicted RBP4.4□□□□□ -1.71
SF3B6-202ENST00000478050 SCPEP1Q9HB40 452 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 BEX1Q9HBH7 125 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 FGF21Q9NSA1 209 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 MRPL22Q9NWU5 206 aaKnown RBP4.4□□□□□ -1.71
SF3B6-202ENST00000478050 EIF3KQ9UBQ5 218 aaKnown RBP4.4□□□□□ -1.71
SF3B6-202ENST00000478050 UPB1Q9UBR1 384 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 FBLN5Q9UBX5 448 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 KLK11Q9UBX7 282 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 UBQLN2Q9UHD9 624 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 ZNF107Q9UII5 783 aaPredicted RBP4.4□□□□□ -1.71
SF3B6-202ENST00000478050 KLK13Q9UKR3 277 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 HHLA2Q9UM44 414 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 NPIPA1Q9UND3 350 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 FLVCR2Q9UPI3 526 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 AUP1Q9Y679 476 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 R4GMQ9 66 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 U3KQ87 197 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 AHCTF1Q8WYP5 2266 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 TENM4Q6N022 2769 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 EML6Q6ZMW3 1958 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 POLQO75417 2590 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 AKAP13Q12802 2813 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 ALPK2Q86TB3 2170 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 TRAV18A0A075B6X5 111 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 A0A087WV48 116 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 TMEM272A0A1B0GTI8 110 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 CIB4A0PJX0 185 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 OR2M5A3KFT3 312 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 LEUTXA8MZ59 168 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 G3V3Q6 166 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 H0YC42 278 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms