RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 OR2V2Q96R30 315 aa18.36■□□□□ 0.53
COL9A3-211ENST00000477612 SIGLEC11Q96RL6 698 aa18.36■□□□□ 0.53
COL9A3-211ENST00000477612 HCAR1Q9BXC0 346 aa18.36■□□□□ 0.53
COL9A3-211ENST00000477612 CADM1Q9BY67 442 aaKnown RBP18.36■□□□□ 0.53
COL9A3-211ENST00000477612 MARCH7Q9H992 704 aa18.36■□□□□ 0.53
COL9A3-211ENST00000477612 G6PC2Q9NQR9 355 aa18.36■□□□□ 0.53
COL9A3-211ENST00000477612 DCAF16Q9NXF7 216 aa18.36■□□□□ 0.53
COL9A3-211ENST00000477612 PDP1Q9P0J1 537 aaPredicted RBP18.36■□□□□ 0.53
COL9A3-211ENST00000477612 RIIAD1A6NNX1 92 aa18.35■□□□□ 0.53
COL9A3-211ENST00000477612 IFNL4K9M1U5 179 aa18.35■□□□□ 0.53
COL9A3-211ENST00000477612 ZNF593O00488 134 aaPredicted RBP18.35■□□□□ 0.53
COL9A3-211ENST00000477612 PHF1O43189 567 aaPredicted RBP18.35■□□□□ 0.53
COL9A3-211ENST00000477612 MLNRO43193 412 aa18.35■□□□□ 0.53
COL9A3-211ENST00000477612 FKBP6O75344 327 aa18.35■□□□□ 0.53
COL9A3-211ENST00000477612 LCATP04180 440 aa18.35■□□□□ 0.53
COL9A3-211ENST00000477612 GYPBP06028 91 aa18.35■□□□□ 0.53
COL9A3-211ENST00000477612 CLUP10909 449 aa18.35■□□□□ 0.53
COL9A3-211ENST00000477612 DRAM2Q6UX65 266 aa18.35■□□□□ 0.53
COL9A3-211ENST00000477612 DCXRQ7Z4W1 244 aa18.35■□□□□ 0.53
COL9A3-211ENST00000477612 ATG16L2Q8NAA4 619 aa18.35■□□□□ 0.53
COL9A3-211ENST00000477612 ST7LQ8TDW4 575 aa18.35■□□□□ 0.53
COL9A3-211ENST00000477612 SLCO4A1Q96BD0 722 aa18.35■□□□□ 0.53
COL9A3-211ENST00000477612 GCM1Q9NP62 436 aa18.35■□□□□ 0.53
COL9A3-211ENST00000477612 DNAJB9Q9UBS3 223 aa18.35■□□□□ 0.53
COL9A3-211ENST00000477612 PPP1R3CQ9UQK1 317 aa18.35■□□□□ 0.53
COL9A3-211ENST00000477612 H3BN98 237 aa18.34■□□□□ 0.53
COL9A3-211ENST00000477612 PLPP2O43688 288 aa18.34■□□□□ 0.53
COL9A3-211ENST00000477612 ANXA8P13928 327 aa18.34■□□□□ 0.53
COL9A3-211ENST00000477612 CBX1P83916 185 aa18.34■□□□□ 0.53
COL9A3-211ENST00000477612 CDK5Q00535 292 aa18.34■□□□□ 0.53
COL9A3-211ENST00000477612 MALLQ13021 153 aa18.34■□□□□ 0.53
COL9A3-211ENST00000477612 TMEM155Q4W5P6 130 aa18.34■□□□□ 0.53
COL9A3-211ENST00000477612 LRRC28Q86X40 367 aaPredicted RBP18.34■□□□□ 0.53
COL9A3-211ENST00000477612 TMEM158Q8WZ71 300 aa18.34■□□□□ 0.53
COL9A3-211ENST00000477612 NRBF2Q96F24 287 aa18.34■□□□□ 0.53
COL9A3-211ENST00000477612 MEGF10Q96KG7 1140 aa18.34■□□□□ 0.53
COL9A3-211ENST00000477612 KCNJ15Q99712 375 aa18.34■□□□□ 0.53
COL9A3-211ENST00000477612 GAL3ST1Q99999 423 aa18.34■□□□□ 0.53
COL9A3-211ENST00000477612 LPAR2Q9HBW0 351 aa18.34■□□□□ 0.53
COL9A3-211ENST00000477612 TMEM100Q9NV29 134 aa18.34■□□□□ 0.53
COL9A3-211ENST00000477612 OSMP13725 252 aa18.33■□□□□ 0.52
COL9A3-211ENST00000477612 ZNF181Q2M3W8 571 aa18.33■□□□□ 0.52
COL9A3-211ENST00000477612 PGAP1Q75T13 922 aa18.33■□□□□ 0.52
COL9A3-211ENST00000477612 RHOUQ7L0Q8 258 aa18.33■□□□□ 0.52
COL9A3-211ENST00000477612 HS3ST5Q8IZT8 346 aa18.33■□□□□ 0.52
COL9A3-211ENST00000477612 IQCF1Q8N6M8 205 aa18.33■□□□□ 0.52
COL9A3-211ENST00000477612 SLAMF6Q96DU3 332 aa18.33■□□□□ 0.52
COL9A3-211ENST00000477612 REPIN1Q9BWE0 567 aaKnown RBP18.33■□□□□ 0.52
COL9A3-211ENST00000477612 NTN4Q9HB63 628 aa18.33■□□□□ 0.52
COL9A3-211ENST00000477612 ZNF878C9JN71 531 aa18.32■□□□□ 0.52
COL9A3-211ENST00000477612 H0YL77 283 aa18.32■□□□□ 0.52
COL9A3-211ENST00000477612 TMEM178BH3BS89 294 aa18.32■□□□□ 0.52
COL9A3-211ENST00000477612 GLCEO94923 617 aa18.32■□□□□ 0.52
COL9A3-211ENST00000477612 FSTL3O95633 263 aa18.32■□□□□ 0.52
COL9A3-211ENST00000477612 PNPP00491 289 aa18.32■□□□□ 0.52
COL9A3-211ENST00000477612 SPARCP09486 303 aa18.32■□□□□ 0.52
COL9A3-211ENST00000477612 GATA4P43694 442 aa18.32■□□□□ 0.52
COL9A3-211ENST00000477612 SRP9P49458 86 aaKnown RBP18.32■□□□□ 0.52
COL9A3-211ENST00000477612 GINS1Q14691 196 aa18.32■□□□□ 0.52
COL9A3-211ENST00000477612 SNAI3Q3KNW1 292 aa18.32■□□□□ 0.52
COL9A3-211ENST00000477612 CELF2-AS1Q8N7Q2 184 aa18.32■□□□□ 0.52
COL9A3-211ENST00000477612 OR10AD1Q8NGE0 317 aa18.32■□□□□ 0.52
COL9A3-211ENST00000477612 OR6K6Q8NGW6 343 aa18.32■□□□□ 0.52
COL9A3-211ENST00000477612 ZNF556Q9HAH1 456 aa18.32■□□□□ 0.52
COL9A3-211ENST00000477612 PPIAL4EA0A075B759 164 aa18.31■□□□□ 0.52
COL9A3-211ENST00000477612 PPIAL4CA0A0B4J2A2 164 aa18.31■□□□□ 0.52
COL9A3-211ENST00000477612 ISPDA4D126 451 aa18.31■□□□□ 0.52
COL9A3-211ENST00000477612 FAM183AA6NL82 134 aa18.31■□□□□ 0.52
COL9A3-211ENST00000477612 RNF212BA8MTL3 300 aa18.31■□□□□ 0.52
COL9A3-211ENST00000477612 PPIAL4DF5H284 164 aa18.31■□□□□ 0.52
COL9A3-211ENST00000477612 E2F6O75461 281 aa18.31■□□□□ 0.52
COL9A3-211ENST00000477612 ATP5HO75947 161 aa18.31■□□□□ 0.52
COL9A3-211ENST00000477612 HMGN1P05114 100 aa18.31■□□□□ 0.52
COL9A3-211ENST00000477612 PPIAL4FP0DN26 164 aa18.31■□□□□ 0.52
COL9A3-211ENST00000477612 PRKACGP22612 351 aa18.31■□□□□ 0.52
COL9A3-211ENST00000477612 GATA3P23771 443 aa18.31■□□□□ 0.52
COL9A3-211ENST00000477612 SRP14P37108 136 aaKnown RBP18.31■□□□□ 0.52
COL9A3-211ENST00000477612 RASSF2P50749 326 aa18.31■□□□□ 0.52
COL9A3-211ENST00000477612 MMP16P51512 607 aa18.31■□□□□ 0.52
COL9A3-211ENST00000477612 BTG1P62324 171 aa18.31■□□□□ 0.52
COL9A3-211ENST00000477612 HNRNPA0Q13151 305 aaKnown RBP18.31■□□□□ 0.52
COL9A3-211ENST00000477612 SHQ1Q6PI26 577 aaKnown RBP18.31■□□□□ 0.52
COL9A3-211ENST00000477612 RFLNBQ8N5W9 214 aa18.31■□□□□ 0.52
COL9A3-211ENST00000477612 BHLHE23Q8NDY6 225 aa18.31■□□□□ 0.52
COL9A3-211ENST00000477612 UTP4Q969X6 686 aaKnown RBP18.31■□□□□ 0.52
COL9A3-211ENST00000477612 MED20Q9H944 212 aa18.31■□□□□ 0.52
COL9A3-211ENST00000477612 PATZ1Q9HBE1 687 aaKnown RBP18.31■□□□□ 0.52
COL9A3-211ENST00000477612 POLR3KQ9Y2Y1 108 aaPredicted RBP18.31■□□□□ 0.52
COL9A3-211ENST00000477612 J3QLI3 93 aa18.3■□□□□ 0.52
COL9A3-211ENST00000477612 SBK2P0C263 348 aa18.3■□□□□ 0.52
COL9A3-211ENST00000477612 ANOS1P23352 680 aa18.3■□□□□ 0.52
COL9A3-211ENST00000477612 CPT2P23786 658 aa18.3■□□□□ 0.52
COL9A3-211ENST00000477612 SLC6A9P48067 706 aa18.3■□□□□ 0.52
COL9A3-211ENST00000477612 ZNF92Q03936 586 aa18.3■□□□□ 0.52
COL9A3-211ENST00000477612 C1orf229Q6ZS94 237 aaPredicted RBP18.3■□□□□ 0.52
COL9A3-211ENST00000477612 DPY19L4Q7Z388 723 aa18.3■□□□□ 0.52
COL9A3-211ENST00000477612 PHC2Q8IXK0 858 aa18.3■□□□□ 0.52
COL9A3-211ENST00000477612 TIGD4Q8IY51 512 aa18.3■□□□□ 0.52
COL9A3-211ENST00000477612 SPICQ8N5J4 248 aa18.3■□□□□ 0.52
COL9A3-211ENST00000477612 TEX29Q8N6K0 151 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms