RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 YIPF7Q8N8F6 280 aa13.21□□□□□ -0.29
SEC13-215ENST00000477547 AKAP1Q92667 903 aaKnown RBP eCLIP13.21□□□□□ -0.29
SEC13-215ENST00000477547 APOBEC3DQ96AK3 386 aaPredicted RBP13.21□□□□□ -0.29
SEC13-215ENST00000477547 TMEM80Q96HE8 168 aa13.21□□□□□ -0.29
SEC13-215ENST00000477547 BCL2L14Q9BZR8 327 aa13.21□□□□□ -0.29
SEC13-215ENST00000477547 UBTD1Q9HAC8 227 aa13.21□□□□□ -0.29
SEC13-215ENST00000477547 ACOXLQ9NUZ1 547 aa13.21□□□□□ -0.29
SEC13-215ENST00000477547 PAK1IP1Q9NWT1 392 aaPredicted RBP13.21□□□□□ -0.29
SEC13-215ENST00000477547 GNG8Q9UK08 70 aa13.21□□□□□ -0.29
SEC13-215ENST00000477547 J3QW42 95 aa13.2□□□□□ -0.3
SEC13-215ENST00000477547 LCATP04180 440 aa13.2□□□□□ -0.3
SEC13-215ENST00000477547 LCKP06239 509 aa13.2□□□□□ -0.3
SEC13-215ENST00000477547 LIMS3P0CW19 117 aa13.2□□□□□ -0.3
SEC13-215ENST00000477547 LIMS4P0CW20 117 aa13.2□□□□□ -0.3
SEC13-215ENST00000477547 ZNF121P58317 390 aaPredicted RBP13.2□□□□□ -0.3
SEC13-215ENST00000477547 ERVS71-1P61550 626 aa13.2□□□□□ -0.3
SEC13-215ENST00000477547 SLC35A2P78381 396 aa13.2□□□□□ -0.3
SEC13-215ENST00000477547 MVKQ03426 396 aa13.2□□□□□ -0.3
SEC13-215ENST00000477547 GALEQ14376 348 aa13.2□□□□□ -0.3
SEC13-215ENST00000477547 RSPO1Q2MKA7 263 aaPredicted RBP13.2□□□□□ -0.3
SEC13-215ENST00000477547 SPATA46Q5T0L3 261 aa13.2□□□□□ -0.3
SEC13-215ENST00000477547 ZNF684Q5T5D7 378 aa13.2□□□□□ -0.3
SEC13-215ENST00000477547 CDH24Q86UP0 819 aa13.2□□□□□ -0.3
SEC13-215ENST00000477547 OR1J1Q8NGS3 322 aa13.2□□□□□ -0.3
SEC13-215ENST00000477547 SGCDQ92629 289 aa13.2□□□□□ -0.3
SEC13-215ENST00000477547 MYDGFQ969H8 173 aa13.2□□□□□ -0.3
SEC13-215ENST00000477547 FBXW5Q969U6 566 aa13.2□□□□□ -0.3
SEC13-215ENST00000477547 C4orf36Q96KX1 117 aa13.2□□□□□ -0.3
SEC13-215ENST00000477547 MYCBPQ99417 103 aaPredicted RBP13.2□□□□□ -0.3
SEC13-215ENST00000477547 BRD7Q9NPI1 651 aa13.2□□□□□ -0.3
SEC13-215ENST00000477547 CA10Q9NS85 328 aa13.2□□□□□ -0.3
SEC13-215ENST00000477547 TBCCD1Q9NVR7 557 aa13.2□□□□□ -0.3
SEC13-215ENST00000477547 GTF2A1LQ9UNN4 478 aa13.2□□□□□ -0.3
SEC13-215ENST00000477547 LRCH1Q9Y2L9 728 aa13.2□□□□□ -0.3
SEC13-215ENST00000477547 METTL15A6NJ78 407 aa13.19□□□□□ -0.3
SEC13-215ENST00000477547 E7EQL1 145 aa13.19□□□□□ -0.3
SEC13-215ENST00000477547 PTGES3LE9PB15 166 aa13.19□□□□□ -0.3
SEC13-215ENST00000477547 HS3ST1O14792 307 aa13.19□□□□□ -0.3
SEC13-215ENST00000477547 MYL12BO14950 172 aa13.19□□□□□ -0.3
SEC13-215ENST00000477547 TBX1O43435 398 aa13.19□□□□□ -0.3
SEC13-215ENST00000477547 SULT1C4O75897 302 aa13.19□□□□□ -0.3
SEC13-215ENST00000477547 RPP14O95059 124 aaKnown RBP13.19□□□□□ -0.3
SEC13-215ENST00000477547 NGFP01138 241 aa13.19□□□□□ -0.3
SEC13-215ENST00000477547 CDK1P06493 297 aa13.19□□□□□ -0.3
SEC13-215ENST00000477547 HOXB4P17483 251 aaPredicted RBP13.19□□□□□ -0.3
SEC13-215ENST00000477547 RAD52P43351 418 aa13.19□□□□□ -0.3
SEC13-215ENST00000477547 ETV1P50549 477 aa13.19□□□□□ -0.3
SEC13-215ENST00000477547 UCP2P55851 309 aa13.19□□□□□ -0.3
SEC13-215ENST00000477547 PPP1CBP62140 327 aa13.19□□□□□ -0.3
SEC13-215ENST00000477547 MFGE8Q08431 387 aaPredicted RBP13.19□□□□□ -0.3
SEC13-215ENST00000477547 SNAI3Q3KNW1 292 aa13.19□□□□□ -0.3
SEC13-215ENST00000477547 RGS7BPQ6MZT1 257 aaPredicted RBP13.19□□□□□ -0.3
SEC13-215ENST00000477547 FAM57BQ71RH2 274 aa13.19□□□□□ -0.3
SEC13-215ENST00000477547 LILRB1Q8NHL6 650 aaPredicted RBP13.19□□□□□ -0.3
SEC13-215ENST00000477547 C1QTNF5Q9BXJ0 243 aa13.19□□□□□ -0.3
SEC13-215ENST00000477547 ZNF442Q9H7R0 627 aa13.19□□□□□ -0.3
SEC13-215ENST00000477547 CHCHD3Q9NX63 227 aaKnown RBP13.19□□□□□ -0.3
SEC13-215ENST00000477547 LRRC42Q9Y546 428 aa13.19□□□□□ -0.3
SEC13-215ENST00000477547 N6AMT1Q9Y5N5 214 aa13.19□□□□□ -0.3
SEC13-215ENST00000477547 NIPBLQ6KC79 2804 aaeCLIP13.19□□□□□ -0.3
SEC13-215ENST00000477547 LOC110117498-PIK3R3F6TDL0 507 aa13.18□□□□□ -0.3
SEC13-215ENST00000477547 J3QLW9 94 aa13.18□□□□□ -0.3
SEC13-215ENST00000477547 RGS10O43665 173 aa13.18□□□□□ -0.3
SEC13-215ENST00000477547 ZNF19P17023 458 aa13.18□□□□□ -0.3
SEC13-215ENST00000477547 ANOS1P23352 680 aa13.18□□□□□ -0.3
SEC13-215ENST00000477547 EEF1B2P24534 225 aaKnown RBP13.18□□□□□ -0.3
SEC13-215ENST00000477547 C21orf33P30042 268 aaPredicted RBP13.18□□□□□ -0.3
SEC13-215ENST00000477547 DCTDP32321 178 aa13.18□□□□□ -0.3
SEC13-215ENST00000477547 THBS4P35443 961 aa13.18□□□□□ -0.3
SEC13-215ENST00000477547 GLRXP35754 106 aa13.18□□□□□ -0.3
SEC13-215ENST00000477547 OR12D2P58182 307 aa13.18□□□□□ -0.3
SEC13-215ENST00000477547 GABARAPL2P60520 117 aa13.18□□□□□ -0.3
SEC13-215ENST00000477547 LIPNQ5VXI9 398 aa13.18□□□□□ -0.3
SEC13-215ENST00000477547 COLCA1Q6ZS62 124 aa13.18□□□□□ -0.3
SEC13-215ENST00000477547 NAA40Q86UY6 237 aa13.18□□□□□ -0.3
SEC13-215ENST00000477547 SYS1Q8N2H4 156 aa13.18□□□□□ -0.3
SEC13-215ENST00000477547 KLHL36Q8N4N3 616 aa13.18□□□□□ -0.3
SEC13-215ENST00000477547 SLC25A40Q8TBP6 338 aa13.18□□□□□ -0.3
SEC13-215ENST00000477547 TMEM171Q8WVE6 324 aa13.18□□□□□ -0.3
SEC13-215ENST00000477547 PGAM5Q96HS1 289 aa13.18□□□□□ -0.3
SEC13-215ENST00000477547 COG8Q96MW5 612 aa13.18□□□□□ -0.3
SEC13-215ENST00000477547 ZNF649Q9BS31 505 aa13.18□□□□□ -0.3
SEC13-215ENST00000477547 POFUT1Q9H488 388 aa13.18□□□□□ -0.3
SEC13-215ENST00000477547 DUSP21Q9H596 190 aa13.18□□□□□ -0.3
SEC13-215ENST00000477547 MOB1AQ9H8S9 216 aa13.18□□□□□ -0.3
SEC13-215ENST00000477547 FAM206AQ9NX38 181 aa13.18□□□□□ -0.3
SEC13-215ENST00000477547 CISD1Q9NZ45 108 aaKnown RBP13.18□□□□□ -0.3
SEC13-215ENST00000477547 PTTG3PQ9NZH4 202 aa13.18□□□□□ -0.3
SEC13-215ENST00000477547 ERVK-18Q9QC07 812 aa13.18□□□□□ -0.3
SEC13-215ENST00000477547 R4GMQ9 66 aa13.18□□□□□ -0.3
SEC13-215ENST00000477547 ARFGEF3Q5TH69 2177 aa13.18□□□□□ -0.3
SEC13-215ENST00000477547 AKAP6Q13023 2319 aa13.18□□□□□ -0.3
SEC13-215ENST00000477547 TMEM269A0A1B0GVZ9 245 aa13.17□□□□□ -0.3
SEC13-215ENST00000477547 TACSTD2P09758 323 aa13.17□□□□□ -0.3
SEC13-215ENST00000477547 PSMB10P40306 273 aa13.17□□□□□ -0.3
SEC13-215ENST00000477547 MALLQ13021 153 aa13.17□□□□□ -0.3
SEC13-215ENST00000477547 GFOD2Q3B7J2 385 aa13.17□□□□□ -0.3
SEC13-215ENST00000477547 BCL2L15Q5TBC7 163 aa13.17□□□□□ -0.3
SEC13-215ENST00000477547 OR2G6Q5TZ20 316 aa13.17□□□□□ -0.3
SEC13-215ENST00000477547 ZNF544Q6NX49 715 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms