RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 PLSCR5A0PG75 271 aa11.25□□□□□ -0.61
TOP3A-205ENST00000477508 ACOD1A6NK06 481 aa11.25□□□□□ -0.61
TOP3A-205ENST00000477508 ZNF670-ZNF695F2Z2N8 137 aa11.25□□□□□ -0.61
TOP3A-205ENST00000477508 ENTPD6O75354 484 aa11.25□□□□□ -0.61
TOP3A-205ENST00000477508 MRPL3P09001 348 aaKnown RBP11.25□□□□□ -0.61
TOP3A-205ENST00000477508 SELEP16581 610 aa11.25□□□□□ -0.61
TOP3A-205ENST00000477508 GABRB1P18505 474 aa11.25□□□□□ -0.61
TOP3A-205ENST00000477508 CAPGP40121 348 aa11.25□□□□□ -0.61
TOP3A-205ENST00000477508 PRKXP51817 358 aa11.25□□□□□ -0.61
TOP3A-205ENST00000477508 EFNA4P52798 201 aa11.25□□□□□ -0.61
TOP3A-205ENST00000477508 ERVS71-1P61550 626 aa11.25□□□□□ -0.61
TOP3A-205ENST00000477508 ADARB1P78563 741 aaKnown RBP11.25□□□□□ -0.61
TOP3A-205ENST00000477508 EGR3Q06889 387 aa11.25□□□□□ -0.61
TOP3A-205ENST00000477508 MSMPQ1L6U9 139 aa11.25□□□□□ -0.61
TOP3A-205ENST00000477508 SPATA46Q5T0L3 261 aa11.25□□□□□ -0.61
TOP3A-205ENST00000477508 ZNF691Q5VV52 312 aa11.25□□□□□ -0.61
TOP3A-205ENST00000477508 FBXW12Q6X9E4 464 aa11.25□□□□□ -0.61
TOP3A-205ENST00000477508 LRP11Q86VZ4 500 aa11.25□□□□□ -0.61
TOP3A-205ENST00000477508 SLC35F2Q8IXU6 374 aa11.25□□□□□ -0.61
TOP3A-205ENST00000477508 ZNF679Q8IYX0 411 aa11.25□□□□□ -0.61
TOP3A-205ENST00000477508 ZNF283Q8N7M2 679 aa11.25□□□□□ -0.61
TOP3A-205ENST00000477508 OR51G2Q8NGK0 314 aa11.25□□□□□ -0.61
TOP3A-205ENST00000477508 NEU4Q8WWR8 484 aaPredicted RBP11.25□□□□□ -0.61
TOP3A-205ENST00000477508 HAVCR1Q96D42 359 aa11.25□□□□□ -0.61
TOP3A-205ENST00000477508 VRK1Q99986 396 aaPredicted RBP11.25□□□□□ -0.61
TOP3A-205ENST00000477508 ADI1Q9BV57 179 aa11.25□□□□□ -0.61
TOP3A-205ENST00000477508 OPA3Q9H6K4 179 aa11.25□□□□□ -0.61
TOP3A-205ENST00000477508 FZR1Q9UM11 496 aa11.25□□□□□ -0.61
TOP3A-205ENST00000477508 CLPTM1O96005 669 aa11.24□□□□□ -0.61
TOP3A-205ENST00000477508 F12P00748 615 aaPredicted RBP11.24□□□□□ -0.61
TOP3A-205ENST00000477508 ADRA2AP08913 450 aa11.24□□□□□ -0.61
TOP3A-205ENST00000477508 KITLGP21583 273 aa11.24□□□□□ -0.61
TOP3A-205ENST00000477508 CFL1P23528 166 aaKnown RBP11.24□□□□□ -0.61
TOP3A-205ENST00000477508 CX3CR1P49238 355 aa11.24□□□□□ -0.61
TOP3A-205ENST00000477508 DSCR9P59020 149 aa11.24□□□□□ -0.61
TOP3A-205ENST00000477508 ACTC1P68032 377 aa11.24□□□□□ -0.61
TOP3A-205ENST00000477508 ACTA1P68133 377 aa11.24□□□□□ -0.61
TOP3A-205ENST00000477508 IL5RAQ01344 420 aa11.24□□□□□ -0.61
TOP3A-205ENST00000477508 PSG7Q13046 419 aa11.24□□□□□ -0.61
TOP3A-205ENST00000477508 TESK1Q15569 626 aa11.24□□□□□ -0.61
TOP3A-205ENST00000477508 PCGF3Q3KNV8 242 aa11.24□□□□□ -0.61
TOP3A-205ENST00000477508 FAM209AQ5JX71 171 aa11.24□□□□□ -0.61
TOP3A-205ENST00000477508 ZNF322Q6U7Q0 402 aaPredicted RBP11.24□□□□□ -0.61
TOP3A-205ENST00000477508 SPNS3Q6ZMD2 512 aa11.24□□□□□ -0.61
TOP3A-205ENST00000477508 SPATC1Q76KD6 591 aa11.24□□□□□ -0.61
TOP3A-205ENST00000477508 ITFG2Q969R8 447 aa11.24□□□□□ -0.61
TOP3A-205ENST00000477508 CMBLQ96DG6 245 aa11.24□□□□□ -0.61
TOP3A-205ENST00000477508 RNFT2Q96EX2 444 aa11.24□□□□□ -0.61
TOP3A-205ENST00000477508 OR8B4Q96RC9 309 aa11.24□□□□□ -0.61
TOP3A-205ENST00000477508 DIRC2Q96SL1 478 aa11.24□□□□□ -0.61
TOP3A-205ENST00000477508 AMELYQ99218 206 aa11.24□□□□□ -0.61
TOP3A-205ENST00000477508 NKIRAS2Q9NYR9 191 aa11.24□□□□□ -0.61
TOP3A-205ENST00000477508 KLHDC2Q9Y2U9 406 aa11.24□□□□□ -0.61
TOP3A-205ENST00000477508 RPL36Q9Y3U8 105 aaKnown RBP11.24□□□□□ -0.61
TOP3A-205ENST00000477508 PRRC2AP48634 2157 aaKnown RBP11.24□□□□□ -0.61
TOP3A-205ENST00000477508 XRCC2O43543 280 aa11.23□□□□□ -0.61
TOP3A-205ENST00000477508 TIMM8AO60220 97 aaPredicted RBP11.23□□□□□ -0.61
TOP3A-205ENST00000477508 ATP6V1G2O95670 118 aa11.23□□□□□ -0.61
TOP3A-205ENST00000477508 ANXA2P07355 339 aaKnown RBP11.23□□□□□ -0.61
TOP3A-205ENST00000477508 CSF3P09919 207 aa11.23□□□□□ -0.61
TOP3A-205ENST00000477508 MPV17P39210 176 aa11.23□□□□□ -0.61
TOP3A-205ENST00000477508 ALDH3B1P43353 468 aa11.23□□□□□ -0.61
TOP3A-205ENST00000477508 RIDAP52758 137 aaKnown RBP11.23□□□□□ -0.61
TOP3A-205ENST00000477508 HCCSP53701 268 aa11.23□□□□□ -0.61
TOP3A-205ENST00000477508 CXCR4P61073 352 aa11.23□□□□□ -0.61
TOP3A-205ENST00000477508 MAD2L1BPQ15013 274 aaPredicted RBP11.23□□□□□ -0.61
TOP3A-205ENST00000477508 KLHL22Q53GT1 634 aa11.23□□□□□ -0.61
TOP3A-205ENST00000477508 LRRN1Q6UXK5 716 aa11.23□□□□□ -0.61
TOP3A-205ENST00000477508 MRPL21Q7Z2W9 205 aaKnown RBP11.23□□□□□ -0.61
TOP3A-205ENST00000477508 NAA40Q86UY6 237 aa11.23□□□□□ -0.61
TOP3A-205ENST00000477508 EGFL6Q8IUX8 553 aa11.23□□□□□ -0.61
TOP3A-205ENST00000477508 OR10H4Q8NGA5 316 aa11.23□□□□□ -0.61
TOP3A-205ENST00000477508 MRPL48Q96GC5 212 aaKnown RBP11.23□□□□□ -0.61
TOP3A-205ENST00000477508 OR10A2Q9H208 303 aa11.23□□□□□ -0.61
TOP3A-205ENST00000477508 RGCCQ9H4X1 137 aa11.23□□□□□ -0.61
TOP3A-205ENST00000477508 MYOZ1Q9NP98 299 aaPredicted RBP11.23□□□□□ -0.61
TOP3A-205ENST00000477508 PTTG3PQ9NZH4 202 aa11.23□□□□□ -0.61
TOP3A-205ENST00000477508 MYEF2Q9P2K5 600 aaKnown RBP11.23□□□□□ -0.61
TOP3A-205ENST00000477508 ZNF391Q9UJN7 358 aa11.23□□□□□ -0.61
TOP3A-205ENST00000477508 PURGQ9UJV8 347 aaKnown RBP11.23□□□□□ -0.61
TOP3A-205ENST00000477508 IKZF2Q9UKS7 526 aa11.23□□□□□ -0.61
TOP3A-205ENST00000477508 ZDHHC8Q9ULC8 765 aa11.23□□□□□ -0.61
TOP3A-205ENST00000477508 RRP15Q9Y3B9 282 aaKnown RBP11.23□□□□□ -0.61
TOP3A-205ENST00000477508 LRP12Q9Y561 859 aa11.23□□□□□ -0.61
TOP3A-205ENST00000477508 AKAP9Q99996 3911 aa11.23□□□□□ -0.61
TOP3A-205ENST00000477508 IRGMA1A4Y4 181 aa11.22□□□□□ -0.61
TOP3A-205ENST00000477508 C17orf100A8MU93 164 aa11.22□□□□□ -0.61
TOP3A-205ENST00000477508 SULT1C4O75897 302 aa11.22□□□□□ -0.61
TOP3A-205ENST00000477508 FADS2O95864 444 aaKnown RBP11.22□□□□□ -0.61
TOP3A-205ENST00000477508 IGHV4-39P01824 125 aa11.22□□□□□ -0.61
TOP3A-205ENST00000477508 KRT8P05787 483 aa11.22□□□□□ -0.61
TOP3A-205ENST00000477508 DBTP11182 482 aaKnown RBP11.22□□□□□ -0.61
TOP3A-205ENST00000477508 DDOSTP39656 456 aa11.22□□□□□ -0.61
TOP3A-205ENST00000477508 HSPA13P48723 471 aa11.22□□□□□ -0.61
TOP3A-205ENST00000477508 ZNF81P51508 661 aa11.22□□□□□ -0.61
TOP3A-205ENST00000477508 ZNF121P58317 390 aaPredicted RBP11.22□□□□□ -0.61
TOP3A-205ENST00000477508 PSMA6P60900 246 aaKnown RBP11.22□□□□□ -0.61
TOP3A-205ENST00000477508 ISL1P61371 349 aa11.22□□□□□ -0.61
TOP3A-205ENST00000477508 MAP1AP78559 2803 aaPredicted RBP11.22□□□□□ -0.61
TOP3A-205ENST00000477508 ZNF91Q05481 1191 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms