RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 PFN2P35080 140 aa3.59□□□□□ -1.83
VPS50-212ENST00000476413 KIR3DL2P43630 455 aa3.59□□□□□ -1.83
VPS50-212ENST00000476413 GPR1P46091 355 aa3.59□□□□□ -1.83
VPS50-212ENST00000476413 RAB7AP51149 207 aa3.59□□□□□ -1.83
VPS50-212ENST00000476413 ATP6V0D1P61421 351 aa3.59□□□□□ -1.83
VPS50-212ENST00000476413 ZNF33AQ06730 810 aa3.59□□□□□ -1.83
VPS50-212ENST00000476413 SLC39A6Q13433 755 aa3.59□□□□□ -1.83
VPS50-212ENST00000476413 ART3Q13508 389 aa3.59□□□□□ -1.83
VPS50-212ENST00000476413 CAVIN4Q5BKX8 364 aa3.59□□□□□ -1.83
VPS50-212ENST00000476413 ADNP2Q6IQ32 1131 aa3.59□□□□□ -1.83
VPS50-212ENST00000476413 LINC00336Q6ZUF6 198 aa3.59□□□□□ -1.83
VPS50-212ENST00000476413 GPR26Q8NDV2 337 aa3.59□□□□□ -1.83
VPS50-212ENST00000476413 OR6N1Q8NGY5 312 aa3.59□□□□□ -1.83
VPS50-212ENST00000476413 OR8U1Q8NH10 309 aa3.59□□□□□ -1.83
VPS50-212ENST00000476413 RAB1CQ92928 201 aa3.59□□□□□ -1.83
VPS50-212ENST00000476413 IL22Q9GZX6 179 aa3.59□□□□□ -1.83
VPS50-212ENST00000476413 NAA50Q9GZZ1 169 aaKnown RBP3.59□□□□□ -1.83
VPS50-212ENST00000476413 TDRD3Q9H7E2 651 aaKnown RBP3.59□□□□□ -1.83
VPS50-212ENST00000476413 ZNF430Q9H8G1 570 aaPredicted RBP3.59□□□□□ -1.83
VPS50-212ENST00000476413 WFDC1Q9HC57 220 aa3.59□□□□□ -1.83
VPS50-212ENST00000476413 HMG20AQ9NP66 347 aa3.59□□□□□ -1.83
VPS50-212ENST00000476413 UBIAD1Q9Y5Z9 338 aa3.59□□□□□ -1.83
VPS50-212ENST00000476413 MROH7Q68CQ1 1323 aa3.59□□□□□ -1.83
VPS50-212ENST00000476413 TNS2Q63HR2 1409 aa3.59□□□□□ -1.84
VPS50-212ENST00000476413 NEURL4Q96JN8 1562 aa3.59□□□□□ -1.84
VPS50-212ENST00000476413 TSPOAP1O95153 1857 aa3.58□□□□□ -1.84
VPS50-212ENST00000476413 IGHV3OR16-9A0A0B4J2B5 98 aa3.58□□□□□ -1.84
VPS50-212ENST00000476413 PDZK1P1A8MUH7 402 aa3.58□□□□□ -1.84
VPS50-212ENST00000476413 SERPINE3A8MV23 424 aa3.58□□□□□ -1.84
VPS50-212ENST00000476413 ANKRD65E5RJM6 399 aa3.58□□□□□ -1.84
VPS50-212ENST00000476413 SOCS1O15524 211 aa3.58□□□□□ -1.84
VPS50-212ENST00000476413 XRCC2O43543 280 aa3.58□□□□□ -1.84
VPS50-212ENST00000476413 YIF1AO95070 293 aa3.58□□□□□ -1.84
VPS50-212ENST00000476413 CPN2P22792 545 aa3.58□□□□□ -1.84
VPS50-212ENST00000476413 CFHR2P36980 270 aa3.58□□□□□ -1.84
VPS50-212ENST00000476413 BCAP31P51572 246 aa3.58□□□□□ -1.84
VPS50-212ENST00000476413 CDKN2DP55273 166 aa3.58□□□□□ -1.84
VPS50-212ENST00000476413 STK11Q15831 433 aa3.58□□□□□ -1.84
VPS50-212ENST00000476413 LINC00523Q86TU6 105 aa3.58□□□□□ -1.84
VPS50-212ENST00000476413 MYOCDQ8IZQ8 938 aa3.58□□□□□ -1.84
VPS50-212ENST00000476413 UBALD1Q8TB05 177 aa3.58□□□□□ -1.84
VPS50-212ENST00000476413 ITFG1Q8TB96 612 aa3.58□□□□□ -1.84
VPS50-212ENST00000476413 PTX4Q96A99 478 aa3.58□□□□□ -1.84
VPS50-212ENST00000476413 SGTBQ96EQ0 304 aa3.58□□□□□ -1.84
VPS50-212ENST00000476413 BTN2A3PQ96KV6 586 aa3.58□□□□□ -1.84
VPS50-212ENST00000476413 CAMK2N2Q96S95 79 aa3.58□□□□□ -1.84
VPS50-212ENST00000476413 CALN1Q9BXU9 219 aa3.58□□□□□ -1.84
VPS50-212ENST00000476413 SLIRPQ9GZT3 109 aaKnown RBP3.58□□□□□ -1.84
VPS50-212ENST00000476413 OR52D1Q9H346 318 aa3.58□□□□□ -1.84
VPS50-212ENST00000476413 CLSTN2Q9H4D0 955 aa3.58□□□□□ -1.84
VPS50-212ENST00000476413 FBXO44Q9H4M3 255 aa3.58□□□□□ -1.84
VPS50-212ENST00000476413 MED4Q9NPJ6 270 aa3.58□□□□□ -1.84
VPS50-212ENST00000476413 ZNF355PQ9NSJ1 428 aa3.58□□□□□ -1.84
VPS50-212ENST00000476413 ZNRD1Q9P1U0 126 aa3.58□□□□□ -1.84
VPS50-212ENST00000476413 KIF27Q86VH2 1401 aa3.58□□□□□ -1.84
VPS50-212ENST00000476413 A0A1W2PNU3 283 aaPredicted RBP3.57□□□□□ -1.84
VPS50-212ENST00000476413 SLC22A20A6NK97 555 aa3.57□□□□□ -1.84
VPS50-212ENST00000476413 ZNF705GA8MUZ8 300 aaPredicted RBP3.57□□□□□ -1.84
VPS50-212ENST00000476413 ZNF324O75467 553 aaPredicted RBP3.57□□□□□ -1.84
VPS50-212ENST00000476413 SEMA3DO95025 777 aa3.57□□□□□ -1.84
VPS50-212ENST00000476413 FARS2O95363 451 aaKnown RBP3.57□□□□□ -1.84
VPS50-212ENST00000476413 CTDNEP1O95476 244 aa3.57□□□□□ -1.84
VPS50-212ENST00000476413 CRYGCP07315 174 aa3.57□□□□□ -1.84
VPS50-212ENST00000476413 CD37P11049 281 aa3.57□□□□□ -1.84
VPS50-212ENST00000476413 PRKACAP17612 351 aa3.57□□□□□ -1.84
VPS50-212ENST00000476413 PSMC3P17980 439 aa3.57□□□□□ -1.84
VPS50-212ENST00000476413 MSR1P21757 451 aa3.57□□□□□ -1.84
VPS50-212ENST00000476413 DTYMKP23919 212 aa3.57□□□□□ -1.84
VPS50-212ENST00000476413 KRTAP5-9P26371 169 aa3.57□□□□□ -1.84
VPS50-212ENST00000476413 RBM34P42696 430 aaKnown RBP3.57□□□□□ -1.84
VPS50-212ENST00000476413 NDUFA8P51970 172 aa3.57□□□□□ -1.84
VPS50-212ENST00000476413 GFERP55789 205 aa3.57□□□□□ -1.84
VPS50-212ENST00000476413 LCN2P80188 198 aa3.57□□□□□ -1.84
VPS50-212ENST00000476413 TSC22D1Q15714 1073 aa3.57□□□□□ -1.84
VPS50-212ENST00000476413 NKAIN4Q8IVV8 208 aa3.57□□□□□ -1.84
VPS50-212ENST00000476413 CDKL3Q8IVW4 592 aaPredicted RBP3.57□□□□□ -1.84
VPS50-212ENST00000476413 ZNF695Q8IW36 515 aa3.57□□□□□ -1.84
VPS50-212ENST00000476413 TRAM1L1Q8N609 369 aa3.57□□□□□ -1.84
VPS50-212ENST00000476413 AGMATQ9BSE5 352 aa3.57□□□□□ -1.84
VPS50-212ENST00000476413 NDFIP1Q9BT67 221 aa3.57□□□□□ -1.84
VPS50-212ENST00000476413 ZNF442Q9H7R0 627 aa3.57□□□□□ -1.84
VPS50-212ENST00000476413 PATZ1Q9HBE1 687 aaKnown RBP3.57□□□□□ -1.84
VPS50-212ENST00000476413 ZC4H2Q9NQZ6 224 aa3.57□□□□□ -1.84
VPS50-212ENST00000476413 CHRAC1Q9NRG0 131 aa3.57□□□□□ -1.84
VPS50-212ENST00000476413 YTHDF2Q9Y5A9 579 aaKnown RBP3.57□□□□□ -1.84
VPS50-212ENST00000476413 MYO10Q9HD67 2058 aa3.56□□□□□ -1.84
VPS50-212ENST00000476413 IGHV1OR15-9A0A0B4J2B8 117 aa3.56□□□□□ -1.84
VPS50-212ENST00000476413 SYCE1LA8MT33 242 aa3.56□□□□□ -1.84
VPS50-212ENST00000476413 CD70P32970 193 aa3.56□□□□□ -1.84
VPS50-212ENST00000476413 MYCNOSP40205 109 aa3.56□□□□□ -1.84
VPS50-212ENST00000476413 PPICP45877 212 aa3.56□□□□□ -1.84
VPS50-212ENST00000476413 CACNG7P62955 275 aa3.56□□□□□ -1.84
VPS50-212ENST00000476413 TCEAL5Q5H9L2 206 aa3.56□□□□□ -1.84
VPS50-212ENST00000476413 FAM78AQ5JUQ0 283 aa3.56□□□□□ -1.84
VPS50-212ENST00000476413 KIF2BQ8N4N8 673 aa3.56□□□□□ -1.84
VPS50-212ENST00000476413 COQ8AQ8NI60 647 aa3.56□□□□□ -1.84
VPS50-212ENST00000476413 TCEAL3Q969E4 200 aa3.56□□□□□ -1.84
VPS50-212ENST00000476413 ISOC2Q96AB3 205 aa3.56□□□□□ -1.84
VPS50-212ENST00000476413 FOPNLQ96NB1 174 aa3.56□□□□□ -1.84
VPS50-212ENST00000476413 FANCEQ9HB96 536 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms