RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 VENTXO95231 258 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 PTTG1O95997 202 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 HPRT1P00492 218 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 HOXC4P09017 264 aaPredicted RBP3.24□□□□□ -1.89
VPS13D-207ENST00000476169 SLC35E2BP0CK96 405 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 AK4P27144 223 aaPredicted RBP3.24□□□□□ -1.89
VPS13D-207ENST00000476169 TEAD1P28347 426 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 SHC1P29353 583 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 GPX4P36969 197 aaPredicted RBP3.24□□□□□ -1.89
VPS13D-207ENST00000476169 HAAOP46952 286 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 XKP51811 444 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 RND2P52198 227 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 AP1S2P56377 157 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 TSPAN5P62079 268 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 MXD1Q05195 221 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 ST3GAL4Q11206 333 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 STX4Q12846 297 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 TPBGQ13641 420 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 LY6DQ14210 128 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 DMC1Q14565 340 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 ZNF266Q14584 549 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 FAM182AQ5T1J6 154 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 LCN12Q6JVE5 192 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 WDR82Q6UXN9 313 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 PRSS41Q7RTY9 318 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 PEX26Q7Z412 305 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 C17orf82Q86X59 251 aaPredicted RBP3.24□□□□□ -1.89
VPS13D-207ENST00000476169 CBLN2Q8IUK8 224 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 FUNDC1Q8IVP5 155 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 FAM71AQ8IYT1 594 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 ZADH2Q8N4Q0 377 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 ARRDC1Q8N5I2 433 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 RNF10Q8N5U6 811 aaKnown RBP3.24□□□□□ -1.89
VPS13D-207ENST00000476169 NECAP1Q8NC96 275 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 OR2L8Q8NGY9 312 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 MRAPQ8TCY5 172 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 LRRC29Q8WV35 223 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 ING5Q8WYH8 240 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 EBF4Q9BQW3 602 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 TRIM51Q9BSJ1 452 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 LRRC61Q9BV99 259 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 SPZ1Q9BXG8 430 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 ING2Q9H160 280 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 PSTPIP2Q9H939 334 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 IFT46Q9NQC8 304 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 Q9UF83 564 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 HMGXB4Q9UGU5 601 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 ST3GAL6Q9Y274 331 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 VSIG4Q9Y279 399 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 PPIL1Q9Y3C6 166 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 SLC25A15Q9Y619 301 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 ADGRB3O60242 1522 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 C3P01024 1663 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 ADGBQ8N7X0 1667 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 A0A0A6YYD5 115 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 IGKV1D-13A0A0B4J2D9 117 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 A0A1B0GU03 582 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 CIB4A0PJX0 185 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 ANKRD20A5PA0PJZ0 165 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 GOLGA8IPA6NC78 632 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 NCBP2LA6PVI3 153 aaKnown RBP3.23□□□□□ -1.89
VPS13D-207ENST00000476169 SYCE1LA8MT33 242 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 M0QXV9 152 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 UNC13BO14795 1591 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 AQP9O43315 295 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 EMC8O43402 210 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 ADAP1O75689 374 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 SRP72O76094 671 aaKnown RBP3.23□□□□□ -1.89
VPS13D-207ENST00000476169 SNAPINO95295 136 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 BRI3O95415 125 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 OXTP01178 125 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 EIF4EP06730 217 aaKnown RBP3.23□□□□□ -1.89
VPS13D-207ENST00000476169 KRT7P08729 469 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 TACSTD2P09758 323 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 CSF3P09919 207 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 GKN3PP0CG01 181 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 IGKV1-13P0DP09 117 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 LIPCP11150 499 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 BTCP35070 178 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 HCAR3P49019 387 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 RPL34P49207 117 aaKnown RBP3.23□□□□□ -1.89
VPS13D-207ENST00000476169 PRLHRP49683 370 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 HCCSP53701 268 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 APOC4P55056 127 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 OR2B8PP59922 312 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 DSTNP60981 165 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 SEMG2Q02383 582 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 DYNC1I2Q13409 638 aaKnown RBP3.23□□□□□ -1.89
VPS13D-207ENST00000476169 MADCAM1Q13477 382 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 AQP6Q13520 282 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 FLOT2Q14254 428 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 PRPSAP1Q14558 356 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 PON2Q15165 354 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 SLC1A5Q15758 541 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 POU2AF1Q16633 256 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 ACTL10Q5JWF8 245 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 RESP18Q5W5W9 173 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 MOB1BQ7L9L4 216 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 SSX7Q7RTT5 188 aa3.23□□□□□ -1.89
VPS13D-207ENST00000476169 FAM220AQ7Z4H9 259 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms