RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 ZNF540Q8NDQ6 660 aa16.08■□□□□ 0.16
PTCD3-210ENST00000473829 OR5L1Q8NGL2 311 aa16.08■□□□□ 0.16
PTCD3-210ENST00000473829 SPTSSAQ969W0 71 aa16.08■□□□□ 0.16
PTCD3-210ENST00000473829 ABHD6Q9BV23 337 aa16.08■□□□□ 0.16
PTCD3-210ENST00000473829 SAP30LQ9HAJ7 183 aa16.08■□□□□ 0.16
PTCD3-210ENST00000473829 CENPMQ9NSP4 180 aa16.08■□□□□ 0.16
PTCD3-210ENST00000473829 DECR2Q9NUI1 292 aa16.08■□□□□ 0.16
PTCD3-210ENST00000473829 SONP18583 2426 aaKnown RBP16.08■□□□□ 0.16
PTCD3-210ENST00000473829 IGHV1-69-2A0A0G2JMI3 117 aa16.07■□□□□ 0.16
PTCD3-210ENST00000473829 CCDC182A6NF36 153 aa16.07■□□□□ 0.16
PTCD3-210ENST00000473829 WNT9BO14905 357 aa16.07■□□□□ 0.16
PTCD3-210ENST00000473829 TPD52L2O43399 206 aaKnown RBP16.07■□□□□ 0.16
PTCD3-210ENST00000473829 SLC2A1P11166 492 aa16.07■□□□□ 0.16
PTCD3-210ENST00000473829 ZNF16P17020 682 aaPredicted RBP16.07■□□□□ 0.16
PTCD3-210ENST00000473829 POLR2IP36954 125 aaKnown RBP16.07■□□□□ 0.16
PTCD3-210ENST00000473829 RBMXP38159 391 aaKnown RBP16.07■□□□□ 0.16
PTCD3-210ENST00000473829 LIPAP38571 399 aa16.07■□□□□ 0.16
PTCD3-210ENST00000473829 NAA10P41227 235 aaPredicted RBP16.07■□□□□ 0.16
PTCD3-210ENST00000473829 CRYBB2P43320 205 aa16.07■□□□□ 0.16
PTCD3-210ENST00000473829 SLC6A9P48067 706 aa16.07■□□□□ 0.16
PTCD3-210ENST00000473829 PRKXP51817 358 aa16.07■□□□□ 0.16
PTCD3-210ENST00000473829 APOFQ13790 326 aa16.07■□□□□ 0.16
PTCD3-210ENST00000473829 GK2Q14410 553 aaPredicted RBP16.07■□□□□ 0.16
PTCD3-210ENST00000473829 ZMAT1Q5H9K5 638 aa16.07■□□□□ 0.16
PTCD3-210ENST00000473829 C12orf73Q69YU5 71 aa16.07■□□□□ 0.16
PTCD3-210ENST00000473829 BCDIN3DQ7Z5W3 292 aaKnown RBP16.07■□□□□ 0.16
PTCD3-210ENST00000473829 OSBPL10Q9BXB5 764 aa16.07■□□□□ 0.16
PTCD3-210ENST00000473829 ZDHHC8Q9ULC8 765 aa16.07■□□□□ 0.16
PTCD3-210ENST00000473829 KLHDC2Q9Y2U9 406 aa16.07■□□□□ 0.16
PTCD3-210ENST00000473829 NAV3Q8IVL0 2385 aa16.06■□□□□ 0.16
PTCD3-210ENST00000473829 CD55P08174 381 aa16.06■□□□□ 0.16
PTCD3-210ENST00000473829 GPR6P46095 362 aaPredicted RBP16.06■□□□□ 0.16
PTCD3-210ENST00000473829 RPS7P62081 194 aaKnown RBP16.06■□□□□ 0.16
PTCD3-210ENST00000473829 EFNB1P98172 346 aa16.06■□□□□ 0.16
PTCD3-210ENST00000473829 SLC35D3Q5M8T2 416 aa16.06■□□□□ 0.16
PTCD3-210ENST00000473829 C6orf52Q5T4I8 152 aa16.06■□□□□ 0.16
PTCD3-210ENST00000473829 ZFP1Q6P2D0 407 aa16.06■□□□□ 0.16
PTCD3-210ENST00000473829 DRAM2Q6UX65 266 aa16.06■□□□□ 0.16
PTCD3-210ENST00000473829 BHLHE23Q8NDY6 225 aa16.06■□□□□ 0.16
PTCD3-210ENST00000473829 OR2Z1Q8NG97 314 aa16.06■□□□□ 0.16
PTCD3-210ENST00000473829 RNF133Q8WVZ7 376 aa16.06■□□□□ 0.16
PTCD3-210ENST00000473829 ELMOD3Q96FG2 381 aa16.06■□□□□ 0.16
PTCD3-210ENST00000473829 POM121Q96HA1 1249 aa16.06■□□□□ 0.16
PTCD3-210ENST00000473829 KCNJ15Q99712 375 aa16.06■□□□□ 0.16
PTCD3-210ENST00000473829 TEX12Q9BXU0 123 aa16.06■□□□□ 0.16
PTCD3-210ENST00000473829 TREM2Q9NZC2 230 aa16.06■□□□□ 0.16
PTCD3-210ENST00000473829 MALRD1Q5VYJ5 2156 aa16.06■□□□□ 0.16
PTCD3-210ENST00000473829 IQCF6A8MYZ5 107 aa16.05■□□□□ 0.16
PTCD3-210ENST00000473829 PPIHO43447 177 aaKnown RBP16.05■□□□□ 0.16
PTCD3-210ENST00000473829 TNFAIP6P98066 277 aaPredicted RBP16.05■□□□□ 0.16
PTCD3-210ENST00000473829 TAF13Q15543 124 aa16.05■□□□□ 0.16
PTCD3-210ENST00000473829 GLYATL3Q5SZD4 288 aa16.05■□□□□ 0.16
PTCD3-210ENST00000473829 SHFQ7M4L6 423 aa16.05■□□□□ 0.16
PTCD3-210ENST00000473829 TCEANCQ8N8B7 351 aa16.05■□□□□ 0.16
PTCD3-210ENST00000473829 OR2AE1Q8NHA4 323 aa16.05■□□□□ 0.16
PTCD3-210ENST00000473829 OTOSQ8NHW6 89 aa16.05■□□□□ 0.16
PTCD3-210ENST00000473829 DIRC2Q96SL1 478 aa16.05■□□□□ 0.16
PTCD3-210ENST00000473829 GABARAPL3Q9BY60 117 aa16.05■□□□□ 0.16
PTCD3-210ENST00000473829 NARFLQ9H6Q4 476 aa16.05■□□□□ 0.16
PTCD3-210ENST00000473829 YAE1D1Q9NRH1 226 aa16.05■□□□□ 0.16
PTCD3-210ENST00000473829 DCAF16Q9NXF7 216 aa16.05■□□□□ 0.16
PTCD3-210ENST00000473829 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.04■□□□□ 0.162e-8■■■■■ 33.2
PTCD3-210ENST00000473829 H0YL77 283 aa16.04■□□□□ 0.16
PTCD3-210ENST00000473829 TLX2O43763 284 aaPredicted RBP16.04■□□□□ 0.16
PTCD3-210ENST00000473829 MRPL3P09001 348 aaKnown RBP16.04■□□□□ 0.16
PTCD3-210ENST00000473829 OPRL1P41146 370 aa16.04■□□□□ 0.16
PTCD3-210ENST00000473829 CX3CR1P49238 355 aa16.04■□□□□ 0.16
PTCD3-210ENST00000473829 CHN2P52757 468 aa16.04■□□□□ 0.16
PTCD3-210ENST00000473829 HCCSP53701 268 aa16.04■□□□□ 0.16
PTCD3-210ENST00000473829 TMEM33P57088 247 aa16.04■□□□□ 0.16
PTCD3-210ENST00000473829 GRB2P62993 217 aaKnown RBP16.04■□□□□ 0.16
PTCD3-210ENST00000473829 ZNF92Q03936 586 aa16.04■□□□□ 0.16
PTCD3-210ENST00000473829 AVPI1Q5T686 147 aa16.04■□□□□ 0.16
PTCD3-210ENST00000473829 ZNF283Q8N7M2 679 aa16.04■□□□□ 0.16
PTCD3-210ENST00000473829 OR8G5Q8NG78 346 aa16.04■□□□□ 0.16
PTCD3-210ENST00000473829 OR10AD1Q8NGE0 317 aa16.04■□□□□ 0.16
PTCD3-210ENST00000473829 CLDND2Q8NHS1 167 aa16.04■□□□□ 0.16
PTCD3-210ENST00000473829 MSI2Q96DH6 328 aaKnown RBP16.04■□□□□ 0.16
PTCD3-210ENST00000473829 RAB3IPQ96QF0 476 aaPredicted RBP16.04■□□□□ 0.16
PTCD3-210ENST00000473829 TEAD3Q99594 435 aa16.04■□□□□ 0.16
PTCD3-210ENST00000473829 RIBC2Q9H4K1 309 aa16.04■□□□□ 0.16
PTCD3-210ENST00000473829 SVEP1Q4LDE5 3571 aa16.03■□□□□ 0.16
PTCD3-210ENST00000473829 DYSFO75923 2080 aa16.03■□□□□ 0.16
PTCD3-210ENST00000473829 EI24O14681 340 aa16.03■□□□□ 0.16
PTCD3-210ENST00000473829 MLNRO43193 412 aa16.03■□□□□ 0.16
PTCD3-210ENST00000473829 ALPLP05186 524 aa16.03■□□□□ 0.16
PTCD3-210ENST00000473829 MALLQ13021 153 aa16.03■□□□□ 0.16
PTCD3-210ENST00000473829 AADACL4Q5VUY2 407 aa16.03■□□□□ 0.16
PTCD3-210ENST00000473829 CYB5R2Q6BCY4 276 aa16.03■□□□□ 0.16
PTCD3-210ENST00000473829 PRSS45Q7RTY3 260 aa16.03■□□□□ 0.16
PTCD3-210ENST00000473829 MRPL21Q7Z2W9 205 aaKnown RBP16.03■□□□□ 0.16
PTCD3-210ENST00000473829 TMEM163Q8TC26 289 aa16.03■□□□□ 0.16
PTCD3-210ENST00000473829 ITLN1Q8WWA0 313 aa16.03■□□□□ 0.16
PTCD3-210ENST00000473829 IL4I1Q96RQ9 567 aa16.03■□□□□ 0.16
PTCD3-210ENST00000473829 RBM4BQ9BQ04 359 aaKnown RBP16.03■□□□□ 0.16
PTCD3-210ENST00000473829 SLC30A2Q9BRI3 323 aa16.03■□□□□ 0.16
PTCD3-210ENST00000473829 PRRG3Q9BZD7 231 aa16.03■□□□□ 0.16
PTCD3-210ENST00000473829 EGLN1Q9GZT9 426 aa16.03■□□□□ 0.16
PTCD3-210ENST00000473829 S100A14Q9HCY8 104 aa16.03■□□□□ 0.16
PTCD3-210ENST00000473829 DNAJC27Q9NZQ0 273 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms