RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 DDX28Q9NUL7 540 aaKnown RBP11.21□□□□□ -0.61
TPM3-216ENST00000473036 TBCCD1Q9NVR7 557 aa11.21□□□□□ -0.61
TPM3-216ENST00000473036 WARS2Q9UGM6 360 aaKnown RBP11.21□□□□□ -0.61
TPM3-216ENST00000473036 ATPIF1Q9UII2 106 aa11.21□□□□□ -0.61
TPM3-216ENST00000473036 DUSP13Q9UII6 198 aa11.21□□□□□ -0.61
TPM3-216ENST00000473036 GRIP1Q9Y3R0 1128 aa11.21□□□□□ -0.61
TPM3-216ENST00000473036 YLPM1P49750 1951 aaKnown RBP11.21□□□□□ -0.62
TPM3-216ENST00000473036 NBEAL1Q6ZS30 2694 aa11.21□□□□□ -0.62
TPM3-216ENST00000473036 SSX4O60224 188 aa11.2□□□□□ -0.62
TPM3-216ENST00000473036 ABHD16AO95870 558 aa11.2□□□□□ -0.62
TPM3-216ENST00000473036 IGHV3-13P01766 116 aa11.2□□□□□ -0.62
TPM3-216ENST00000473036 NAT2P11245 290 aa11.2□□□□□ -0.62
TPM3-216ENST00000473036 OTX1P32242 354 aaPredicted RBP11.2□□□□□ -0.62
TPM3-216ENST00000473036 PPOXP50336 477 aa11.2□□□□□ -0.62
TPM3-216ENST00000473036 PRSS12P56730 875 aa11.2□□□□□ -0.62
TPM3-216ENST00000473036 PSG7Q13046 419 aa11.2□□□□□ -0.62
TPM3-216ENST00000473036 HNRNPA0Q13151 305 aaKnown RBP11.2□□□□□ -0.62
TPM3-216ENST00000473036 KLHL12Q53G59 568 aa11.2□□□□□ -0.62
TPM3-216ENST00000473036 SPRNQ5BIV9 151 aa11.2□□□□□ -0.62
TPM3-216ENST00000473036 RBM48Q5RL73 367 aaKnown RBP11.2□□□□□ -0.62
TPM3-216ENST00000473036 MBNL2Q5VZF2 373 aaKnown RBP11.2□□□□□ -0.62
TPM3-216ENST00000473036 SPATC1Q76KD6 591 aa11.2□□□□□ -0.62
TPM3-216ENST00000473036 ENTHD1Q8IYW4 607 aa11.2□□□□□ -0.62
TPM3-216ENST00000473036 RFLNBQ8N5W9 214 aa11.2□□□□□ -0.62
TPM3-216ENST00000473036 ZNF525Q8N782 197 aa11.2□□□□□ -0.62
TPM3-216ENST00000473036 SYNPRQ8TBG9 265 aa11.2□□□□□ -0.62
TPM3-216ENST00000473036 FBLIM1Q8WUP2 373 aa11.2□□□□□ -0.62
TPM3-216ENST00000473036 CNBD2Q96M20 576 aa11.2□□□□□ -0.62
TPM3-216ENST00000473036 INTS14Q96SY0 518 aa11.2□□□□□ -0.62
TPM3-216ENST00000473036 TEAD3Q99594 435 aa11.2□□□□□ -0.62
TPM3-216ENST00000473036 ATF6BQ99941 703 aa11.2□□□□□ -0.62
TPM3-216ENST00000473036 TPK1Q9H3S4 243 aa11.2□□□□□ -0.62
TPM3-216ENST00000473036 PLCXD1Q9NUJ7 323 aa11.2□□□□□ -0.62
TPM3-216ENST00000473036 HAO2Q9NYQ3 351 aa11.2□□□□□ -0.62
TPM3-216ENST00000473036 TAAR3PQ9P1P4 343 aa11.2□□□□□ -0.62
TPM3-216ENST00000473036 AASSQ9UDR5 926 aa11.2□□□□□ -0.62
TPM3-216ENST00000473036 TPRKBQ9Y3C4 175 aa11.2□□□□□ -0.62
TPM3-216ENST00000473036 IGHV4-30-2A0A087WSY4 118 aa11.19□□□□□ -0.62
TPM3-216ENST00000473036 A0A096LNT2 108 aa11.19□□□□□ -0.62
TPM3-216ENST00000473036 F5H5K5 113 aa11.19□□□□□ -0.62
TPM3-216ENST00000473036 NCR1O76036 304 aa11.19□□□□□ -0.62
TPM3-216ENST00000473036 F12P00748 615 aaPredicted RBP11.19□□□□□ -0.62
TPM3-216ENST00000473036 CCDC159P0C7I6 412 aa11.19□□□□□ -0.62
TPM3-216ENST00000473036 HTR1FP30939 366 aa11.19□□□□□ -0.62
TPM3-216ENST00000473036 ATP6V1E1P36543 226 aa11.19□□□□□ -0.62
TPM3-216ENST00000473036 RBMXP38159 391 aaKnown RBP11.19□□□□□ -0.62
TPM3-216ENST00000473036 NAA10P41227 235 aaPredicted RBP11.19□□□□□ -0.62
TPM3-216ENST00000473036 MMP15P51511 669 aa11.19□□□□□ -0.62
TPM3-216ENST00000473036 EFNA4P52798 201 aa11.19□□□□□ -0.62
TPM3-216ENST00000473036 RPS23P62266 143 aaKnown RBP11.19□□□□□ -0.62
TPM3-216ENST00000473036 CDK5R2Q13319 367 aa11.19□□□□□ -0.62
TPM3-216ENST00000473036 TNK1Q13470 666 aa11.19□□□□□ -0.62
TPM3-216ENST00000473036 HLXQ14774 488 aaPredicted RBP11.19□□□□□ -0.62
TPM3-216ENST00000473036 CLEC12BQ2HXU8 276 aa11.19□□□□□ -0.62
TPM3-216ENST00000473036 SNAI3Q3KNW1 292 aa11.19□□□□□ -0.62
TPM3-216ENST00000473036 MEPCEQ7L2J0 689 aaKnown RBP11.19□□□□□ -0.62
TPM3-216ENST00000473036 EGFL6Q8IUX8 553 aa11.19□□□□□ -0.62
TPM3-216ENST00000473036 OR6N2Q8NGY6 317 aa11.19□□□□□ -0.62
TPM3-216ENST00000473036 OR2AJ1Q8NGZ0 328 aa11.19□□□□□ -0.62
TPM3-216ENST00000473036 SLAMF6Q96DU3 332 aa11.19□□□□□ -0.62
TPM3-216ENST00000473036 TRMT61AQ96FX7 289 aaKnown RBP11.19□□□□□ -0.62
TPM3-216ENST00000473036 MRPL48Q96GC5 212 aaKnown RBP11.19□□□□□ -0.62
TPM3-216ENST00000473036 NR1H4Q96RI1 486 aaPredicted RBP11.19□□□□□ -0.62
TPM3-216ENST00000473036 MNTQ99583 582 aa11.19□□□□□ -0.62
TPM3-216ENST00000473036 VRK1Q99986 396 aaPredicted RBP11.19□□□□□ -0.62
TPM3-216ENST00000473036 ABHD6Q9BV23 337 aa11.19□□□□□ -0.62
TPM3-216ENST00000473036 C1QTNF5Q9BXJ0 243 aa11.19□□□□□ -0.62
TPM3-216ENST00000473036 EIF3KQ9UBQ5 218 aaKnown RBP11.19□□□□□ -0.62
TPM3-216ENST00000473036 COPS3Q9UNS2 423 aa11.19□□□□□ -0.62
TPM3-216ENST00000473036 PMF1-BGLAPU3KQ54 211 aa11.19□□□□□ -0.62
TPM3-216ENST00000473036 EFCAB10A6NFE3 127 aa11.18□□□□□ -0.62
TPM3-216ENST00000473036 LYNX1G3V0Z9 82 aa11.18□□□□□ -0.62
TPM3-216ENST00000473036 MRPS14O60783 128 aaKnown RBP11.18□□□□□ -0.62
TPM3-216ENST00000473036 LILRA1O75019 489 aa11.18□□□□□ -0.62
TPM3-216ENST00000473036 IFNA2P01563 188 aa11.18□□□□□ -0.62
TPM3-216ENST00000473036 HPXP02790 462 aa11.18□□□□□ -0.62
TPM3-216ENST00000473036 MRPL3P09001 348 aaKnown RBP11.18□□□□□ -0.62
TPM3-216ENST00000473036 GNAO1P09471 354 aa11.18□□□□□ -0.62
TPM3-216ENST00000473036 LYNX1P0DP58 116 aa11.18□□□□□ -0.62
TPM3-216ENST00000473036 MAGEB1P43366 347 aa11.18□□□□□ -0.62
TPM3-216ENST00000473036 MTNR1AP48039 350 aa11.18□□□□□ -0.62
TPM3-216ENST00000473036 KLF3P57682 345 aaPredicted RBP11.18□□□□□ -0.62
TPM3-216ENST00000473036 RAB40BQ12829 278 aa11.18□□□□□ -0.62
TPM3-216ENST00000473036 EIF2B1Q14232 305 aaKnown RBP11.18□□□□□ -0.62
TPM3-216ENST00000473036 C6orf141Q5SZD1 244 aa11.18□□□□□ -0.62
TPM3-216ENST00000473036 Q6ZR03 302 aa11.18□□□□□ -0.62
TPM3-216ENST00000473036 PRSS45Q7RTY3 260 aa11.18□□□□□ -0.62
TPM3-216ENST00000473036 OTOSQ8NHW6 89 aa11.18□□□□□ -0.62
TPM3-216ENST00000473036 RNF133Q8WVZ7 376 aa11.18□□□□□ -0.62
TPM3-216ENST00000473036 MYDGFQ969H8 173 aa11.18□□□□□ -0.62
TPM3-216ENST00000473036 CMBLQ96DG6 245 aa11.18□□□□□ -0.62
TPM3-216ENST00000473036 DCLRE1CQ96SD1 692 aaKnown RBP11.18□□□□□ -0.62
TPM3-216ENST00000473036 ELOVL3Q9HB03 270 aa11.18□□□□□ -0.62
TPM3-216ENST00000473036 PTTG3PQ9NZH4 202 aa11.18□□□□□ -0.62
TPM3-216ENST00000473036 CNOT2Q9NZN8 540 aaKnown RBP11.18□□□□□ -0.62
TPM3-216ENST00000473036 TMEM14AQ9Y6G1 99 aa11.18□□□□□ -0.62
TPM3-216ENST00000473036 A0A1W2PPW3 197 aa11.17□□□□□ -0.62
TPM3-216ENST00000473036 ZSCAN5BA6NJL1 495 aa11.17□□□□□ -0.62
TPM3-216ENST00000473036 M0R233 179 aa11.17□□□□□ -0.62
TPM3-216ENST00000473036 SMAD7O15105 426 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms