RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 A0A1W2PR80 420 aa12.08□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 POM121BA6NF01 834 aa12.08□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 SNNO75324 88 aaPredicted RBP12.08□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 BMP2P12643 396 aa12.08□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 ALOX5APP20292 161 aa12.08□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 CD27P26842 260 aa12.08□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 Q3ZCU0 254 aa12.08□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 OR1J1Q8NGS3 322 aa12.08□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 FOXC2Q99958 501 aa12.08□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 ZNF696Q9H7X3 374 aa12.08□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 TAF9BQ9HBM6 251 aa12.08□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 SLC22A11Q9NSA0 550 aa12.08□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 A0A087WZY1 265 aa12.08□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 FAM157AC9JC47 383 aa12.08□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 DEDDO75618 318 aa12.08□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 H3F3CQ6NXT2 135 aa12.08□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 LRRC15Q8TF66 581 aa12.08□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 UBE2ZQ9H832 354 aaPredicted RBP12.08□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 TREM2Q9NZC2 230 aa12.08□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 LINC01553A4QN01 128 aa12.08□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 ADPRHP54922 357 aa12.08□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 FDX2Q6P4F2 183 aa12.08□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 ZFP62Q8NB50 900 aaPredicted RBP12.08□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 NXF2Q9GZY0 626 aaKnown RBP12.08□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 MUTYHQ9UIF7 546 aa12.08□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 KCNG2Q9UJ96 466 aa12.08□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 OR6C68A6NDL8 312 aa12.08□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 CCSMST1Q4G0I0 132 aa12.08□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 KCNRGQ8N5I3 272 aa12.08□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 KISS1RQ969F8 398 aaPredicted RBP12.08□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 CXorf36Q9H7Y0 433 aa12.08□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 LOXL2Q9Y4K0 774 aa12.08□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 ANKUB1A6NFN9 424 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 IGHV3-13P01766 116 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 IGHV3-7P01780 117 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 OPN1MWP04001 364 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 CD14P08571 375 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 OPN1MW2P0DN77 364 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 OPN1MW3P0DN78 364 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 ELK1P19419 428 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 CNR1P21554 472 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 SUMO1P63165 101 aaKnown RBP12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 INSM1Q01101 510 aaPredicted RBP12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 FOXK2Q01167 660 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 TEKQ02763 1124 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 RNF113BQ8IZP6 322 aaKnown RBP12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 CARFQ8N187 725 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 OR4D10Q8NGI6 311 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 OR51E1Q8TCB6 317 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 ZNF583Q96ND8 569 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 RNF24Q9Y225 148 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 LOC100289279A0A1B0GTE1 492 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 GPR31O00270 319 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 EPHA2P29317 976 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 SRPXP78539 464 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 C1orf220Q5T0J3 134 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 GDPGP1Q6ZNW5 385 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 RPUSD4Q96CM3 377 aaKnown RBP12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 MISP3Q96FF7 219 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 CHST8Q9H2A9 424 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 TMEM202A6NGA9 273 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 ICMTO60725 284 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 IVDP26440 423 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 APEX1P27695 318 aaKnown RBP12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 PRSS36Q5K4E3 855 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 RFPL4BQ6ZWI9 263 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 DTWD2Q8NBA8 298 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 RELL2Q8NC24 303 aaPredicted RBP12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 YIPF5Q969M3 257 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 J3KRW8 73 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 PI3P19957 117 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 POLR2IP36954 125 aaKnown RBP12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 SRP9P49458 86 aaKnown RBP12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 ZNF83P51522 516 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 ZXDAP98168 799 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 OR11G2Q8NGC1 345 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 TAS2R4Q9NYW5 299 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 MOKQ9UQ07 419 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 LTBP3Q9NS15 1303 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 OR2F2O95006 317 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 TACR1P25103 407 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 HAAOP46952 286 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 TGIF2LXQ8IUE1 241 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 LGI3Q8N145 548 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 CCL17Q92583 94 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 MBNL1Q9NR56 388 aaKnown RBP12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 ZNF391Q9UJN7 358 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 FABP7O15540 132 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 FURINP09958 794 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 GABRB3P28472 473 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 SOWAHCQ53LP3 525 aaPredicted RBP12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 TMEM268Q5VZI3 342 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 ACSM6Q6P461 480 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 C17orf78Q8N4C9 275 aa12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 KLF13Q9Y2Y9 288 aaPredicted RBP12.07□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 ARHGAP33O14559 1287 aa12.06□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 PPP3CBP16298 524 aa12.06□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 BMP5P22003 454 aa12.06□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 TEAD1P28347 426 aa12.06□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 NKX2-1P43699 371 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms