RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 MRPS11P82912 194 aaKnown RBP13.04□□□□□ -0.32
SDC3-203ENST00000471567 FAM209AQ5JX71 171 aa13.04□□□□□ -0.32
SDC3-203ENST00000471567 SLC25A30Q5SVS4 291 aa13.04□□□□□ -0.32
SDC3-203ENST00000471567 SPATC1Q76KD6 591 aa13.04□□□□□ -0.32
SDC3-203ENST00000471567 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.04□□□□□ -0.32
SDC3-203ENST00000471567 ZNF786Q8N393 782 aa13.04□□□□□ -0.32
SDC3-203ENST00000471567 ZNF283Q8N7M2 679 aa13.04□□□□□ -0.32
SDC3-203ENST00000471567 FAM81AQ8TBF8 368 aa13.04□□□□□ -0.32
SDC3-203ENST00000471567 RFKQ969G6 155 aa13.04□□□□□ -0.32
SDC3-203ENST00000471567 MBOAT4Q96T53 435 aa13.04□□□□□ -0.32
SDC3-203ENST00000471567 AMELYQ99218 206 aa13.04□□□□□ -0.32
SDC3-203ENST00000471567 CNN2Q99439 309 aaKnown RBP13.04□□□□□ -0.32
SDC3-203ENST00000471567 REG4Q9BYZ8 158 aa13.04□□□□□ -0.32
SDC3-203ENST00000471567 NIPAL2Q9H841 368 aa13.04□□□□□ -0.32
SDC3-203ENST00000471567 ZDHHC8Q9ULC8 765 aa13.04□□□□□ -0.32
SDC3-203ENST00000471567 FLNAP21333 2647 aaKnown RBP13.04□□□□□ -0.32
SDC3-203ENST00000471567 IGHV4-30-2A0A087WSY4 118 aa13.03□□□□□ -0.32
SDC3-203ENST00000471567 ERICH4A6NGS2 130 aa13.03□□□□□ -0.32
SDC3-203ENST00000471567 INHBBP09529 407 aa13.03□□□□□ -0.32
SDC3-203ENST00000471567 CX3CR1P49238 355 aa13.03□□□□□ -0.32
SDC3-203ENST00000471567 SNRPGP62308 76 aaKnown RBP13.03□□□□□ -0.32
SDC3-203ENST00000471567 POU4F2Q12837 409 aa13.03□□□□□ -0.32
SDC3-203ENST00000471567 CDK5R2Q13319 367 aa13.03□□□□□ -0.32
SDC3-203ENST00000471567 HLXQ14774 488 aaPredicted RBP13.03□□□□□ -0.32
SDC3-203ENST00000471567 TRIP10Q15642 601 aa13.03□□□□□ -0.32
SDC3-203ENST00000471567 KCTD18Q6PI47 426 aaPredicted RBP13.03□□□□□ -0.32
SDC3-203ENST00000471567 DEGS2Q6QHC5 323 aa13.03□□□□□ -0.32
SDC3-203ENST00000471567 PACRGLQ8N7B6 248 aa13.03□□□□□ -0.32
SDC3-203ENST00000471567 ZNF540Q8NDQ6 660 aa13.03□□□□□ -0.32
SDC3-203ENST00000471567 ASB17Q8WXJ9 295 aa13.03□□□□□ -0.32
SDC3-203ENST00000471567 RDH5Q92781 318 aa13.03□□□□□ -0.32
SDC3-203ENST00000471567 ZNF582Q96NG8 517 aaPredicted RBP13.03□□□□□ -0.32
SDC3-203ENST00000471567 ADGRL4Q9HBW9 690 aa13.03□□□□□ -0.32
SDC3-203ENST00000471567 GMPPBQ9Y5P6 360 aa13.03□□□□□ -0.32
SDC3-203ENST00000471567 ACANP16112 2415 aa13.02□□□□□ -0.32
SDC3-203ENST00000471567 ZSCAN5BA6NJL1 495 aa13.02□□□□□ -0.33
SDC3-203ENST00000471567 IQCF6A8MYZ5 107 aa13.02□□□□□ -0.33
SDC3-203ENST00000471567 RNF223E7ERA6 249 aa13.02□□□□□ -0.33
SDC3-203ENST00000471567 PHYHO14832 338 aa13.02□□□□□ -0.33
SDC3-203ENST00000471567 XRCC2O43543 280 aa13.02□□□□□ -0.33
SDC3-203ENST00000471567 IGHV1-46P01743 117 aa13.02□□□□□ -0.33
SDC3-203ENST00000471567 HPXP02790 462 aa13.02□□□□□ -0.33
SDC3-203ENST00000471567 CD55P08174 381 aa13.02□□□□□ -0.33
SDC3-203ENST00000471567 MRPL3P09001 348 aaKnown RBP13.02□□□□□ -0.33
SDC3-203ENST00000471567 GIFP27352 417 aa13.02□□□□□ -0.33
SDC3-203ENST00000471567 MAGEB1P43366 347 aa13.02□□□□□ -0.33
SDC3-203ENST00000471567 ELF3P78545 371 aaPredicted RBP13.02□□□□□ -0.33
SDC3-203ENST00000471567 ROM1Q03395 351 aa13.02□□□□□ -0.33
SDC3-203ENST00000471567 GK2Q14410 553 aaPredicted RBP13.02□□□□□ -0.33
SDC3-203ENST00000471567 OCLNQ16625 522 aa13.02□□□□□ -0.33
SDC3-203ENST00000471567 MEDAGQ5VYS4 303 aa13.02□□□□□ -0.33
SDC3-203ENST00000471567 KRT77Q7Z794 578 aa13.02□□□□□ -0.33
SDC3-203ENST00000471567 CIARTQ8N365 385 aaPredicted RBP13.02□□□□□ -0.33
SDC3-203ENST00000471567 OR8G5Q8NG78 346 aa13.02□□□□□ -0.33
SDC3-203ENST00000471567 GTF3AQ92664 365 aaKnown RBP13.02□□□□□ -0.33
SDC3-203ENST00000471567 PIMREGQ9BSJ6 248 aa13.02□□□□□ -0.33
SDC3-203ENST00000471567 OPA3Q9H6K4 179 aa13.02□□□□□ -0.33
SDC3-203ENST00000471567 DCLRE1BQ9H816 532 aa13.02□□□□□ -0.33
SDC3-203ENST00000471567 DECR2Q9NUI1 292 aa13.02□□□□□ -0.33
SDC3-203ENST00000471567 FAM118AQ9NWS6 357 aa13.02□□□□□ -0.33
SDC3-203ENST00000471567 SMPD3Q9NY59 655 aaPredicted RBP13.02□□□□□ -0.33
SDC3-203ENST00000471567 KLHDC2Q9Y2U9 406 aa13.02□□□□□ -0.33
SDC3-203ENST00000471567 LOC100130705A0A1B0GUX0 176 aa13.01□□□□□ -0.33
SDC3-203ENST00000471567 VWC2LB2RUY7 222 aa13.01□□□□□ -0.33
SDC3-203ENST00000471567 CASQ2O14958 399 aaPredicted RBP13.01□□□□□ -0.33
SDC3-203ENST00000471567 SLC16A6O15403 523 aa13.01□□□□□ -0.33
SDC3-203ENST00000471567 SPRY3O43610 288 aa13.01□□□□□ -0.33
SDC3-203ENST00000471567 MPZL2O60487 215 aa13.01□□□□□ -0.33
SDC3-203ENST00000471567 ZNF254O75437 659 aa13.01□□□□□ -0.33
SDC3-203ENST00000471567 NCR1O76036 304 aa13.01□□□□□ -0.33
SDC3-203ENST00000471567 SBK2P0C263 348 aa13.01□□□□□ -0.33
SDC3-203ENST00000471567 ACHEP22303 614 aa13.01□□□□□ -0.33
SDC3-203ENST00000471567 DCTDP32321 178 aa13.01□□□□□ -0.33
SDC3-203ENST00000471567 HCCSP53701 268 aa13.01□□□□□ -0.33
SDC3-203ENST00000471567 CCL8P80075 99 aa13.01□□□□□ -0.33
SDC3-203ENST00000471567 CARTPTQ16568 116 aa13.01□□□□□ -0.33
SDC3-203ENST00000471567 SNAI3Q3KNW1 292 aa13.01□□□□□ -0.33
SDC3-203ENST00000471567 OR2T2Q6IF00 324 aa13.01□□□□□ -0.33
SDC3-203ENST00000471567 PGAP1Q75T13 922 aa13.01□□□□□ -0.33
SDC3-203ENST00000471567 PRSS45Q7RTY3 260 aa13.01□□□□□ -0.33
SDC3-203ENST00000471567 MRPL21Q7Z2W9 205 aaKnown RBP13.01□□□□□ -0.33
SDC3-203ENST00000471567 BIVMQ86UB2 503 aa13.01□□□□□ -0.33
SDC3-203ENST00000471567 SLC35F2Q8IXU6 374 aa13.01□□□□□ -0.33
SDC3-203ENST00000471567 OR52H1Q8NGJ2 320 aa13.01□□□□□ -0.33
SDC3-203ENST00000471567 UBE2FQ969M7 185 aa13.01□□□□□ -0.33
SDC3-203ENST00000471567 SPSB4Q96A44 273 aa13.01□□□□□ -0.33
SDC3-203ENST00000471567 REPIN1Q9BWE0 567 aaKnown RBP13.01□□□□□ -0.33
SDC3-203ENST00000471567 MROQ9BYG7 248 aa13.01□□□□□ -0.33
SDC3-203ENST00000471567 EGLN1Q9GZT9 426 aa13.01□□□□□ -0.33
SDC3-203ENST00000471567 CHODLQ9H9P2 273 aa13.01□□□□□ -0.33
SDC3-203ENST00000471567 MSL2Q9HCI7 577 aa13.01□□□□□ -0.33
SDC3-203ENST00000471567 CLN6Q9NWW5 311 aa13.01□□□□□ -0.33
SDC3-203ENST00000471567 DNAJC27Q9NZQ0 273 aa13.01□□□□□ -0.33
SDC3-203ENST00000471567 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.01□□□□□ -0.33
SDC3-203ENST00000471567 CHD3Q12873 2000 aaKnown RBP13□□□□□ -0.33
SDC3-203ENST00000471567 A0A096LNT2 108 aa13□□□□□ -0.33
SDC3-203ENST00000471567 ACOD1A6NK06 481 aa13□□□□□ -0.33
SDC3-203ENST00000471567 SNTNA6NMZ2 147 aa13□□□□□ -0.33
SDC3-203ENST00000471567 ZNF670-ZNF695F2Z2N8 137 aa13□□□□□ -0.33
SDC3-203ENST00000471567 TPD52L2O43399 206 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms