RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 SIGLEC14Q08ET2 396 aa0.45□□□□□ -2.34
UBXN4-207ENST00000471246 DMC1Q14565 340 aa0.45□□□□□ -2.34
UBXN4-207ENST00000471246 TGFBIQ15582 683 aa0.45□□□□□ -2.34
UBXN4-207ENST00000471246 OR7A5Q15622 319 aa0.45□□□□□ -2.34
UBXN4-207ENST00000471246 ZNF726P1Q15940 193 aa0.45□□□□□ -2.34
UBXN4-207ENST00000471246 IMMTQ16891 758 aaKnown RBP0.45□□□□□ -2.34
UBXN4-207ENST00000471246 KLHL12Q53G59 568 aa0.45□□□□□ -2.34
UBXN4-207ENST00000471246 YIF1BQ5BJH7 314 aa0.45□□□□□ -2.34
UBXN4-207ENST00000471246 C6orf226Q5I0X4 101 aa0.45□□□□□ -2.34
UBXN4-207ENST00000471246 KRTAP5-10Q6L8G5 202 aa0.45□□□□□ -2.34
UBXN4-207ENST00000471246 H3F3CQ6NXT2 135 aa0.45□□□□□ -2.34
UBXN4-207ENST00000471246 PMF1Q6P1K2 205 aa0.45□□□□□ -2.34
UBXN4-207ENST00000471246 PRSS54Q6PEW0 395 aa0.45□□□□□ -2.34
UBXN4-207ENST00000471246 TBPL2Q6SJ96 375 aa0.45□□□□□ -2.34
UBXN4-207ENST00000471246 KDELC1Q6UW63 502 aa0.45□□□□□ -2.34
UBXN4-207ENST00000471246 Q6ZSR3 168 aa0.45□□□□□ -2.34
UBXN4-207ENST00000471246 USP50Q70EL3 339 aaPredicted RBP0.45□□□□□ -2.34
UBXN4-207ENST00000471246 EGFL6Q8IUX8 553 aa0.45□□□□□ -2.34
UBXN4-207ENST00000471246 ZNF645Q8N7E2 425 aa0.45□□□□□ -2.34
UBXN4-207ENST00000471246 OR11H7Q8NGC8 314 aa0.45□□□□□ -2.34
UBXN4-207ENST00000471246 OR1J4Q8NGS1 313 aa0.45□□□□□ -2.34
UBXN4-207ENST00000471246 OR5B3Q8NH48 314 aa0.45□□□□□ -2.34
UBXN4-207ENST00000471246 ZNF502Q8TBZ5 544 aa0.45□□□□□ -2.34
UBXN4-207ENST00000471246 SLC7A13Q8TCU3 470 aa0.45□□□□□ -2.34
UBXN4-207ENST00000471246 N4BP2L2Q92802 583 aaPredicted RBP0.45□□□□□ -2.34
UBXN4-207ENST00000471246 SYAP1Q96A49 352 aaPredicted RBP0.45□□□□□ -2.34
UBXN4-207ENST00000471246 SLC41A3Q96GZ6 507 aa0.45□□□□□ -2.34
UBXN4-207ENST00000471246 OR5B12Q96R08 314 aa0.45□□□□□ -2.34
UBXN4-207ENST00000471246 ERP44Q9BS26 406 aa0.45□□□□□ -2.34
UBXN4-207ENST00000471246 MARVELD1Q9BSK0 173 aa0.45□□□□□ -2.34
UBXN4-207ENST00000471246 SAMD10Q9BYL1 202 aa0.45□□□□□ -2.34
UBXN4-207ENST00000471246 ROPN1BQ9BZX4 212 aaPredicted RBP0.45□□□□□ -2.34
UBXN4-207ENST00000471246 LINC00574Q9H8X3 128 aa0.45□□□□□ -2.34
UBXN4-207ENST00000471246 CSNK1G1Q9HCP0 422 aa0.45□□□□□ -2.34
UBXN4-207ENST00000471246 RHBDL2Q9NX52 303 aa0.45□□□□□ -2.34
UBXN4-207ENST00000471246 MTORP42345 2549 aa0.45□□□□□ -2.34
UBXN4-207ENST00000471246 SYNE2Q8WXH0 6885 aaKnown RBP0.45□□□□□ -2.34
UBXN4-207ENST00000471246 ATG2BQ96BY7 2078 aa0.45□□□□□ -2.34
UBXN4-207ENST00000471246 ACACBO00763 2458 aa0.45□□□□□ -2.34
UBXN4-207ENST00000471246 NEBP20929 6669 aa0.45□□□□□ -2.34
UBXN4-207ENST00000471246 DNHD1Q96M86 4753 aa0.45□□□□□ -2.34
UBXN4-207ENST00000471246 VWA8A3KMH1 1905 aa0.44□□□□□ -2.34
UBXN4-207ENST00000471246 COL5A3P25940 1745 aaPredicted RBP0.44□□□□□ -2.34
UBXN4-207ENST00000471246 ADGRA3Q8IWK6 1321 aa0.44□□□□□ -2.34
UBXN4-207ENST00000471246 BIRC6Q9NR09 4857 aa0.44□□□□□ -2.34
UBXN4-207ENST00000471246 SPTA1P02549 2419 aa0.44□□□□□ -2.34
UBXN4-207ENST00000471246 KIAA1671Q9BY89 1806 aa0.44□□□□□ -2.34
UBXN4-207ENST00000471246 C15orf38-AP3S2A0A0A6YYH1 394 aa0.44□□□□□ -2.34
UBXN4-207ENST00000471246 PCP4L1A6NKN8 68 aa0.44□□□□□ -2.34
UBXN4-207ENST00000471246 LRRIQ3A6PVS8 624 aaPredicted RBP0.44□□□□□ -2.34
UBXN4-207ENST00000471246 PRAMEF26H0Y7S4 382 aa0.44□□□□□ -2.34
UBXN4-207ENST00000471246 C3orf84H3BNL1 204 aa0.44□□□□□ -2.34
UBXN4-207ENST00000471246 H7C417 338 aa0.44□□□□□ -2.34
UBXN4-207ENST00000471246 OVOL1O14753 267 aa0.44□□□□□ -2.34
UBXN4-207ENST00000471246 EIF4E2O60573 245 aaKnown RBP0.44□□□□□ -2.34
UBXN4-207ENST00000471246 IGLV7-43P04211 117 aa0.44□□□□□ -2.34
UBXN4-207ENST00000471246 SERPIND1P05546 499 aa0.44□□□□□ -2.34
UBXN4-207ENST00000471246 PABPC4LP0CB38 370 aaKnown RBP0.44□□□□□ -2.34
UBXN4-207ENST00000471246 CD28P10747 220 aa0.44□□□□□ -2.34
UBXN4-207ENST00000471246 U2AF2P26368 475 aaKnown RBP eCLIP0.44□□□□□ -2.344e-7■■■□□ 16
UBXN4-207ENST00000471246 CHMLP26374 656 aa0.44□□□□□ -2.34
UBXN4-207ENST00000471246 CRYBB2P43320 205 aa0.44□□□□□ -2.34
UBXN4-207ENST00000471246 ARFIP1P53367 373 aa0.44□□□□□ -2.34
UBXN4-207ENST00000471246 CDH6P55285 790 aa0.44□□□□□ -2.34
UBXN4-207ENST00000471246 CYP24A1Q07973 514 aa0.44□□□□□ -2.34
UBXN4-207ENST00000471246 TGM3Q08188 693 aa0.44□□□□□ -2.34
UBXN4-207ENST00000471246 CHRNA6Q15825 494 aa0.44□□□□□ -2.34
UBXN4-207ENST00000471246 GPR107Q5VW38 600 aa0.44□□□□□ -2.34
UBXN4-207ENST00000471246 WDR59Q6PJI9 974 aa0.44□□□□□ -2.34
UBXN4-207ENST00000471246 NIPA1Q7RTP0 329 aa0.44□□□□□ -2.34
UBXN4-207ENST00000471246 DAZ4Q86SG3 579 aaKnown RBP0.44□□□□□ -2.34
UBXN4-207ENST00000471246 STK40Q8N2I9 435 aa0.44□□□□□ -2.34
UBXN4-207ENST00000471246 CSGALNACT2Q8N6G5 542 aa0.44□□□□□ -2.34
UBXN4-207ENST00000471246 NPWQ8N729 165 aa0.44□□□□□ -2.34
UBXN4-207ENST00000471246 LRRC75AQ8NAA5 344 aa0.44□□□□□ -2.34
UBXN4-207ENST00000471246 C11orf72Q8NBR9 251 aa0.44□□□□□ -2.34
UBXN4-207ENST00000471246 CHST4Q8NCG5 386 aa0.44□□□□□ -2.34
UBXN4-207ENST00000471246 LY6G5BQ8NDX9 201 aa0.44□□□□□ -2.34
UBXN4-207ENST00000471246 OR2Z1Q8NG97 314 aa0.44□□□□□ -2.34
UBXN4-207ENST00000471246 OR4M1Q8NGD0 313 aa0.44□□□□□ -2.34
UBXN4-207ENST00000471246 TMEM230Q96A57 120 aa0.44□□□□□ -2.34
UBXN4-207ENST00000471246 DUS3LQ96G46 650 aaKnown RBP0.44□□□□□ -2.34
UBXN4-207ENST00000471246 FGF20Q9NP95 211 aaPredicted RBP0.44□□□□□ -2.34
UBXN4-207ENST00000471246 DAZ1Q9NQZ3 744 aaKnown RBP0.44□□□□□ -2.34
UBXN4-207ENST00000471246 PARP11Q9NR21 331 aa0.44□□□□□ -2.34
UBXN4-207ENST00000471246 TAS2R1Q9NYW7 299 aa0.44□□□□□ -2.34
UBXN4-207ENST00000471246 ZNF492Q9P255 531 aa0.44□□□□□ -2.34
UBXN4-207ENST00000471246 MTFP1Q9UDX5 166 aa0.44□□□□□ -2.34
UBXN4-207ENST00000471246 IKZF2Q9UKS7 526 aa0.44□□□□□ -2.34
UBXN4-207ENST00000471246 NUP50Q9UKX7 468 aa0.44□□□□□ -2.34
UBXN4-207ENST00000471246 RAB23Q9ULC3 237 aa0.44□□□□□ -2.34
UBXN4-207ENST00000471246 CLEC4AQ9UMR7 237 aa0.44□□□□□ -2.34
UBXN4-207ENST00000471246 SPEGQ15772 3267 aa0.44□□□□□ -2.34
UBXN4-207ENST00000471246 EPPK1P58107 5090 aaKnown RBP0.44□□□□□ -2.34
UBXN4-207ENST00000471246 BOD1L1Q8NFC6 3051 aa0.44□□□□□ -2.34
UBXN4-207ENST00000471246 LRP5O75197 1615 aa0.44□□□□□ -2.34
UBXN4-207ENST00000471246 TLN1Q9Y490 2541 aaKnown RBP0.44□□□□□ -2.34
UBXN4-207ENST00000471246 YTHDC2Q9H6S0 1430 aaKnown RBP0.44□□□□□ -2.34
UBXN4-207ENST00000471246 RYR3Q15413 4870 aa0.44□□□□□ -2.34
UBXN4-207ENST00000471246 LTBP2Q14767 1821 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms