RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 SPP1P10451 314 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 NQO1P15559 274 aaKnown RBP3.23□□□□□ -1.89
COL9A1-206ENST00000470652 GGT1P19440 569 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 FUT1P19526 365 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 DRD5P21918 477 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 RPS4Y1P22090 263 aaKnown RBP3.23□□□□□ -1.89
COL9A1-206ENST00000470652 IL12BP29460 328 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 GPR183P32249 361 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 EVI2BP34910 448 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 PPICP45877 212 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 CDX1P47902 265 aaPredicted RBP3.23□□□□□ -1.89
COL9A1-206ENST00000470652 SSR4P51571 173 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 CCR4P51679 360 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 CLDN17P56750 224 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 ARG2P78540 354 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 VLDLRP98155 873 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 ZNF117Q03924 483 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 CD300CQ08708 224 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 LRRC74AQ0VAA2 488 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 BNIP2Q12982 314 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 GANABQ14697 944 aaKnown RBP3.23□□□□□ -1.89
COL9A1-206ENST00000470652 ZNF146Q15072 292 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 OR1C1Q15619 314 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 ARHGAP11BQ3KRB8 267 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 EIPR1Q53HC9 387 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 FREM1Q5H8C1 2179 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 COQ5Q5HYK3 327 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 MRPL2Q5T653 305 aaKnown RBP3.23□□□□□ -1.89
COL9A1-206ENST00000470652 GLYATQ6IB77 296 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 NIPAL1Q6NVV3 410 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 H3F3CQ6NXT2 135 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 HACD2Q6Y1H2 254 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 WDR88Q6ZMY6 472 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 ZNF841Q6ZN19 808 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 NCCRP1Q6ZVX7 275 aaPredicted RBP3.23□□□□□ -1.89
COL9A1-206ENST00000470652 GALNTL5Q7Z4T8 443 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 TMEM179BQ7Z7N9 219 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 ALPK2Q86TB3 2170 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 YRDCQ86U90 279 aaKnown RBP3.23□□□□□ -1.89
COL9A1-206ENST00000470652 WDFY1Q8IWB7 410 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 SLC34A3Q8N130 599 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 OR8H2Q8N162 312 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 CYP4Z2PQ8N1L4 340 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 ZNF619Q8N2I2 560 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 FBXW8Q8N3Y1 598 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 TMEM156Q8N614 296 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 LINC00612Q8N6U2 182 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 CLEC1AQ8NC01 280 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 MDS2Q8NDY4 140 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 CHDHQ8NE62 594 aaPredicted RBP3.23□□□□□ -1.89
COL9A1-206ENST00000470652 ATP6V1C2Q8NEY4 427 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 OR7G1Q8NGA0 311 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 OR8J3Q8NGG0 315 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 OR6T1Q8NGN1 323 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 OR52P1PQ8NH57 321 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 NUBPLQ8TB37 319 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 SPPL2AQ8TCT8 520 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 PYDC1Q8WXC3 89 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 NSMAFQ92636 917 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 FAM162AQ96A26 154 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 NEDD4LQ96PU5 975 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 ECSITQ9BQ95 431 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 OR10A4Q9H209 315 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 DSN1Q9H410 356 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 SH2D2AQ9NP31 389 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.23□□□□□ -1.89
COL9A1-206ENST00000470652 GID8Q9NWU2 228 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 P2RX2Q9UBL9 471 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 SEC14L4Q9UDX3 406 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 PRODH2Q9UF12 536 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 POMPQ9Y244 141 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 RPH3AQ9Y2J0 694 aaPredicted RBP3.23□□□□□ -1.89
COL9A1-206ENST00000470652 SLC6A5Q9Y345 797 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 WDR45Q9Y484 360 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 CFAP46Q8IYW2 2715 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 ARHGAP21Q5T5U3 1957 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 NBASA2RRP1 2371 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 PRR14LQ5THK1 2151 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 DSPPQ9NZW4 1301 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 TRAV18A0A075B6X5 111 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 IGHV3-38A0A0C4DH36 116 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 OR5H15A6NDH6 313 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 CPSF4LA6NMK7 179 aaKnown RBP3.22□□□□□ -1.89
COL9A1-206ENST00000470652 EVPLLA8MZ36 301 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 C5orf58C9J3I9 102 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 KPNA4O00629 521 aaPredicted RBP3.22□□□□□ -1.89
COL9A1-206ENST00000470652 FFAR1O14842 300 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 BCL2L11O43521 198 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 EFNA2O43921 213 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 PRAF2O60831 178 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 STX11O75558 287 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 ANGPTL1O95841 491 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 SEMG1P04279 462 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 IGFBP1P08833 259 aaPredicted RBP3.22□□□□□ -1.89
COL9A1-206ENST00000470652 HOXD4P09016 255 aaPredicted RBP3.22□□□□□ -1.89
COL9A1-206ENST00000470652 PABPC4LP0CB38 370 aaKnown RBP3.22□□□□□ -1.89
COL9A1-206ENST00000470652 HSD17B1P14061 328 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 C4BPBP20851 252 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 ME2P23368 584 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 KDELR2P33947 212 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms