RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 ZNF878C9JN71 531 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 E5RGE8 158 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 F5H768 121 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 INMT-MINDY4F8WBC2 141 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 KIR2DS3K7RE56 304 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 HCRTR1O43613 425 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 SYNGR4O95473 234 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 IFNA1P01562 189 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 FTLP02792 175 aaPredicted RBP4.56□□□□□ -1.68
COL3A1-205ENST00000470167 OPN1SWP03999 348 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 CD74P04233 296 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 TYMSP04818 313 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 SERPINE1P05121 402 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 ADH4P08319 380 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 UBBP0CG47 229 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 RAP2AP10114 183 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 ESDP10768 282 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 IGFBP2P18065 325 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 EN2P19622 333 aaPredicted RBP4.56□□□□□ -1.68
COL3A1-205ENST00000470167 CELP19835 753 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 CD40P25942 277 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 SHC1P29353 583 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 TNFSF8P32971 234 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 RPA3P35244 121 aaPredicted RBP4.56□□□□□ -1.68
COL3A1-205ENST00000470167 NUMBP49757 651 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 CAV2P51636 162 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 WNT3P56703 355 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 UBA52P62987 128 aaKnown RBP4.56□□□□□ -1.68
COL3A1-205ENST00000470167 SELENOWP63302 87 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 PRR5P85299 388 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 CDK5Q00535 292 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 CRYZQ08257 329 aaKnown RBP4.56□□□□□ -1.68
COL3A1-205ENST00000470167 PLCXD2Q0VAA5 305 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 MGAT2Q10469 447 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 ZNF154Q13106 437 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 ZNF235Q14590 738 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 KIR2DS3Q14952 304 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 OR1Q1Q15612 314 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 ZNF79Q15937 498 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 ARHGAP11BQ3KRB8 267 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 C3orf36Q3SXR2 165 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 C6orf226Q5I0X4 101 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.56□□□□□ -1.68
COL3A1-205ENST00000470167 TMEM255AQ5JRV8 349 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 C6orf141Q5SZD1 244 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 TXNDC8Q6A555 127 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 C22orf42Q6IC83 251 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 ASPHD2Q6ICH7 369 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 CBLN3Q6UW01 205 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 FRRS1Q6ZNA5 592 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 TPRG1Q6ZUI0 275 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 PTAR1Q7Z6K3 402 aaPredicted RBP4.56□□□□□ -1.68
COL3A1-205ENST00000470167 FTMTQ8N4E7 242 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 CBR4Q8N4T8 237 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 LRRC57Q8N9N7 239 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 CHST4Q8NCG5 386 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 NPEPL1Q8NDH3 523 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 LFNGQ8NES3 379 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 REPS2Q8NFH8 660 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 OR7G2Q8NG99 324 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 OR11H7Q8NGC8 314 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 OR4D11Q8NGI4 311 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 OR51G2Q8NGK0 314 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 OR51Q1Q8NH59 317 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 ZNF519Q8TB69 540 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 PTPMT1Q8WUK0 201 aaPredicted RBP4.56□□□□□ -1.68
COL3A1-205ENST00000470167 CANT1Q8WVQ1 401 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 MCHR2Q969V1 340 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 RGMAQ96B86 450 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 UPRTQ96BW1 309 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 COQ8BQ96D53 544 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 SLC35G5Q96KT7 338 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 CAPNS2Q96L46 248 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 WDR92Q96MX6 357 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 ZNF75AQ96N20 296 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 YPEL4Q96NS1 127 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 RCHY1Q96PM5 261 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 ACOX2Q99424 681 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 TBX5Q99593 518 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 HIST1H2BLQ99880 126 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 NUDT9Q9BW91 350 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 SCNM1Q9BWG6 230 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 CIPCQ9C0C6 399 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 NXF5Q9H1B4 397 aaKnown RBP4.56□□□□□ -1.68
COL3A1-205ENST00000470167 CPVLQ9H3G5 476 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 GALNT9Q9HCQ5 603 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 TXNRD2Q9NNW7 524 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 EXOSC3Q9NQT5 275 aaKnown RBP4.56□□□□□ -1.68
COL3A1-205ENST00000470167 BEX4Q9NWD9 120 aaPredicted RBP4.56□□□□□ -1.68
COL3A1-205ENST00000470167 MED29Q9NX70 200 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 NAT8Q9UHE5 227 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 FAM96BQ9Y3D0 163 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 AK6Q9Y3D8 172 aaKnown RBP4.56□□□□□ -1.68
COL3A1-205ENST00000470167 RAP2CQ9Y3L5 183 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 OR51B2Q9Y5P1 312 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 VWDEQ8N2E2 1590 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 SNED1Q8TER0 1413 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 MYOM1P52179 1685 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 A0A0U1RRA0 63 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 A0A1W2PRX2 142 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms