RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 TEX47Q8TBZ9 253 aa11.87□□□□□ -0.51
COMMD3-208ENST00000470045 ZNF799Q96GE5 643 aa11.87□□□□□ -0.51
COMMD3-208ENST00000470045 OR2V2Q96R30 315 aa11.87□□□□□ -0.51
COMMD3-208ENST00000470045 SIGLEC11Q96RL6 698 aa11.87□□□□□ -0.51
COMMD3-208ENST00000470045 LPAR2Q9HBW0 351 aa11.87□□□□□ -0.51
COMMD3-208ENST00000470045 NPTNQ9Y639 398 aa11.87□□□□□ -0.51
COMMD3-208ENST00000470045 RIIAD1A6NNX1 92 aa11.86□□□□□ -0.51
COMMD3-208ENST00000470045 F5H5K5 113 aa11.86□□□□□ -0.51
COMMD3-208ENST00000470045 SELEP16581 610 aa11.86□□□□□ -0.51
COMMD3-208ENST00000470045 ZNF3P17036 446 aa11.86□□□□□ -0.51
COMMD3-208ENST00000470045 ANOS1P23352 680 aa11.86□□□□□ -0.51
COMMD3-208ENST00000470045 BLVRAP53004 296 aa11.86□□□□□ -0.51
COMMD3-208ENST00000470045 BNIP1Q12981 228 aa11.86□□□□□ -0.51
COMMD3-208ENST00000470045 SLC27A4Q6P1M0 643 aa11.86□□□□□ -0.51
COMMD3-208ENST00000470045 DCXRQ7Z4W1 244 aa11.86□□□□□ -0.51
COMMD3-208ENST00000470045 PEG10Q86TG7 708 aaKnown RBP11.86□□□□□ -0.51
COMMD3-208ENST00000470045 IQCF1Q8N6M8 205 aa11.86□□□□□ -0.51
COMMD3-208ENST00000470045 ZNF511Q8NB15 262 aa11.86□□□□□ -0.51
COMMD3-208ENST00000470045 OR10AD1Q8NGE0 317 aa11.86□□□□□ -0.51
COMMD3-208ENST00000470045 OR13G1Q8NGZ3 307 aa11.86□□□□□ -0.51
COMMD3-208ENST00000470045 ST7LQ8TDW4 575 aa11.86□□□□□ -0.51
COMMD3-208ENST00000470045 SPTSSAQ969W0 71 aa11.86□□□□□ -0.51
COMMD3-208ENST00000470045 SLCO4A1Q96BD0 722 aa11.86□□□□□ -0.51
COMMD3-208ENST00000470045 MEGF10Q96KG7 1140 aa11.86□□□□□ -0.51
COMMD3-208ENST00000470045 ZNF582Q96NG8 517 aaPredicted RBP11.86□□□□□ -0.51
COMMD3-208ENST00000470045 GAL3ST1Q99999 423 aa11.86□□□□□ -0.51
COMMD3-208ENST00000470045 HCAR1Q9BXC0 346 aa11.86□□□□□ -0.51
COMMD3-208ENST00000470045 CADM1Q9BY67 442 aaKnown RBP11.86□□□□□ -0.51
COMMD3-208ENST00000470045 MARCH7Q9H992 704 aa11.86□□□□□ -0.51
COMMD3-208ENST00000470045 PDP1Q9P0J1 537 aaPredicted RBP11.86□□□□□ -0.51
COMMD3-208ENST00000470045 PPP1R3CQ9UQK1 317 aa11.86□□□□□ -0.51
COMMD3-208ENST00000470045 RNF212BA8MTL3 300 aa11.85□□□□□ -0.51
COMMD3-208ENST00000470045 H0YL77 283 aa11.85□□□□□ -0.51
COMMD3-208ENST00000470045 IFNL4K9M1U5 179 aa11.85□□□□□ -0.51
COMMD3-208ENST00000470045 GNGT2O14610 69 aa11.85□□□□□ -0.51
COMMD3-208ENST00000470045 GSC2O15499 205 aa11.85□□□□□ -0.51
COMMD3-208ENST00000470045 PLPP2O43688 288 aa11.85□□□□□ -0.51
COMMD3-208ENST00000470045 FKBP6O75344 327 aa11.85□□□□□ -0.51
COMMD3-208ENST00000470045 LCATP04180 440 aa11.85□□□□□ -0.51
COMMD3-208ENST00000470045 SPARCP09486 303 aa11.85□□□□□ -0.51
COMMD3-208ENST00000470045 MMP16P51512 607 aa11.85□□□□□ -0.51
COMMD3-208ENST00000470045 CBX1P83916 185 aa11.85□□□□□ -0.51
COMMD3-208ENST00000470045 TMEM155Q4W5P6 130 aa11.85□□□□□ -0.51
COMMD3-208ENST00000470045 DRAM2Q6UX65 266 aa11.85□□□□□ -0.51
COMMD3-208ENST00000470045 SPATA24Q86W54 205 aa11.85□□□□□ -0.51
COMMD3-208ENST00000470045 PHC2Q8IXK0 858 aa11.85□□□□□ -0.51
COMMD3-208ENST00000470045 HS3ST5Q8IZT8 346 aa11.85□□□□□ -0.51
COMMD3-208ENST00000470045 BHLHE23Q8NDY6 225 aa11.85□□□□□ -0.51
COMMD3-208ENST00000470045 TMEM158Q8WZ71 300 aa11.85□□□□□ -0.51
COMMD3-208ENST00000470045 SLAMF6Q96DU3 332 aa11.85□□□□□ -0.51
COMMD3-208ENST00000470045 YY1AP1Q9H869 796 aa11.85□□□□□ -0.51
COMMD3-208ENST00000470045 GCM1Q9NP62 436 aa11.85□□□□□ -0.51
COMMD3-208ENST00000470045 DNAJB9Q9UBS3 223 aa11.85□□□□□ -0.51
COMMD3-208ENST00000470045 STAB1Q9NY15 2570 aa11.85□□□□□ -0.51
COMMD3-208ENST00000470045 ISPDA4D126 451 aa11.84□□□□□ -0.51
COMMD3-208ENST00000470045 FAM183AA6NL82 134 aa11.84□□□□□ -0.51
COMMD3-208ENST00000470045 ZNF878C9JN71 531 aa11.84□□□□□ -0.51
COMMD3-208ENST00000470045 H3BN98 237 aa11.84□□□□□ -0.51
COMMD3-208ENST00000470045 TMEM178BH3BS89 294 aa11.84□□□□□ -0.51
COMMD3-208ENST00000470045 ZNF593O00488 134 aaPredicted RBP11.84□□□□□ -0.51
COMMD3-208ENST00000470045 PNPP00491 289 aa11.84□□□□□ -0.51
COMMD3-208ENST00000470045 OSMP13725 252 aa11.84□□□□□ -0.51
COMMD3-208ENST00000470045 ANXA8P13928 327 aa11.84□□□□□ -0.51
COMMD3-208ENST00000470045 RBMXP38159 391 aaKnown RBP11.84□□□□□ -0.51
COMMD3-208ENST00000470045 GATA4P43694 442 aa11.84□□□□□ -0.51
COMMD3-208ENST00000470045 PRSS12P56730 875 aa11.84□□□□□ -0.51
COMMD3-208ENST00000470045 BTG1P62324 171 aa11.84□□□□□ -0.51
COMMD3-208ENST00000470045 CDK5Q00535 292 aa11.84□□□□□ -0.51
COMMD3-208ENST00000470045 MALLQ13021 153 aa11.84□□□□□ -0.51
COMMD3-208ENST00000470045 ZMYND11Q15326 602 aa11.84□□□□□ -0.51
COMMD3-208ENST00000470045 ZNF181Q2M3W8 571 aa11.84□□□□□ -0.51
COMMD3-208ENST00000470045 SNAI3Q3KNW1 292 aa11.84□□□□□ -0.51
COMMD3-208ENST00000470045 KRTAP24-1Q3LI83 254 aa11.84□□□□□ -0.51
COMMD3-208ENST00000470045 C1orf229Q6ZS94 237 aaPredicted RBP11.84□□□□□ -0.51
COMMD3-208ENST00000470045 PGAP1Q75T13 922 aa11.84□□□□□ -0.51
COMMD3-208ENST00000470045 LRRC28Q86X40 367 aaPredicted RBP11.84□□□□□ -0.51
COMMD3-208ENST00000470045 ATG16L2Q8NAA4 619 aa11.84□□□□□ -0.51
COMMD3-208ENST00000470045 OR6K6Q8NGW6 343 aa11.84□□□□□ -0.51
COMMD3-208ENST00000470045 KCNJ15Q99712 375 aa11.84□□□□□ -0.51
COMMD3-208ENST00000470045 REPIN1Q9BWE0 567 aaKnown RBP11.84□□□□□ -0.51
COMMD3-208ENST00000470045 MED20Q9H944 212 aa11.84□□□□□ -0.51
COMMD3-208ENST00000470045 NTN4Q9HB63 628 aa11.84□□□□□ -0.51
COMMD3-208ENST00000470045 WNK2Q9Y3S1 2297 aa11.84□□□□□ -0.51
COMMD3-208ENST00000470045 ARHGAP32A7KAX9 2087 aa11.83□□□□□ -0.51
COMMD3-208ENST00000470045 PPIAL4EA0A075B759 164 aa11.83□□□□□ -0.52
COMMD3-208ENST00000470045 PPIAL4CA0A0B4J2A2 164 aa11.83□□□□□ -0.52
COMMD3-208ENST00000470045 C5orf63A6NC05 138 aa11.83□□□□□ -0.52
COMMD3-208ENST00000470045 F5H0A9 414 aaPredicted RBP11.83□□□□□ -0.52
COMMD3-208ENST00000470045 PPIAL4DF5H284 164 aa11.83□□□□□ -0.52
COMMD3-208ENST00000470045 F5H5P2 479 aa11.83□□□□□ -0.52
COMMD3-208ENST00000470045 E2F6O75461 281 aa11.83□□□□□ -0.52
COMMD3-208ENST00000470045 GLCEO94923 617 aa11.83□□□□□ -0.52
COMMD3-208ENST00000470045 FSTL3O95633 263 aa11.83□□□□□ -0.52
COMMD3-208ENST00000470045 PPIAL4FP0DN26 164 aa11.83□□□□□ -0.52
COMMD3-208ENST00000470045 PRKACGP22612 351 aa11.83□□□□□ -0.52
COMMD3-208ENST00000470045 GATA3P23771 443 aa11.83□□□□□ -0.52
COMMD3-208ENST00000470045 SRP14P37108 136 aaKnown RBP11.83□□□□□ -0.52
COMMD3-208ENST00000470045 SLC6A9P48067 706 aa11.83□□□□□ -0.52
COMMD3-208ENST00000470045 SRP9P49458 86 aaKnown RBP11.83□□□□□ -0.52
COMMD3-208ENST00000470045 ZNF92Q03936 586 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms