RNA–Protein interactions for RNA: ENST00000469694.5

GPC1-208, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 2,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-208ENST00000469694 FAM171A2A8MVW0 826 aa12.43□□□□□ -0.42
GPC1-208ENST00000469694 HLA-AP01891 365 aaKnown RBP12.43□□□□□ -0.42
GPC1-208ENST00000469694 OR8U8P0C7N1 319 aa12.43□□□□□ -0.42
GPC1-208ENST00000469694 PGAM2P15259 253 aa12.43□□□□□ -0.42
GPC1-208ENST00000469694 RBM34P42696 430 aaKnown RBP12.43□□□□□ -0.42
GPC1-208ENST00000469694 ACTBP60709 375 aa12.43□□□□□ -0.42
GPC1-208ENST00000469694 ACTG1P63261 375 aa12.43□□□□□ -0.42
GPC1-208ENST00000469694 ZNF141Q15928 474 aa12.43□□□□□ -0.42
GPC1-208ENST00000469694 ZNF684Q5T5D7 378 aa12.43□□□□□ -0.42
GPC1-208ENST00000469694 TMEM205Q6UW68 189 aa12.43□□□□□ -0.42
GPC1-208ENST00000469694 DRAM2Q6UX65 266 aa12.43□□□□□ -0.42
GPC1-208ENST00000469694 OR51D1Q8NGF3 324 aa12.43□□□□□ -0.42
GPC1-208ENST00000469694 STT3BQ8TCJ2 826 aa12.43□□□□□ -0.42
GPC1-208ENST00000469694 THAP3Q8WTV1 239 aaPredicted RBP12.43□□□□□ -0.42
GPC1-208ENST00000469694 Q96M85 177 aa12.43□□□□□ -0.42
GPC1-208ENST00000469694 LRFN5Q96NI6 719 aa12.43□□□□□ -0.42
GPC1-208ENST00000469694 SPSB2Q99619 263 aa12.43□□□□□ -0.42
GPC1-208ENST00000469694 WDR77Q9BQA1 342 aaPredicted RBP12.43□□□□□ -0.42
GPC1-208ENST00000469694 IER2Q9BTL4 223 aa12.43□□□□□ -0.42
GPC1-208ENST00000469694 SELENOIQ9C0D9 397 aa12.43□□□□□ -0.42
GPC1-208ENST00000469694 OCIAD1Q9NX40 245 aa12.43□□□□□ -0.42
GPC1-208ENST00000469694 PRODH2Q9UF12 536 aa12.43□□□□□ -0.42
GPC1-208ENST00000469694 ZNF346Q9UL40 294 aaKnown RBP12.43□□□□□ -0.42
GPC1-208ENST00000469694 ADAM18Q9Y3Q7 739 aa12.43□□□□□ -0.42
GPC1-208ENST00000469694 PCDHGA1Q9Y5H4 931 aa12.43□□□□□ -0.42
GPC1-208ENST00000469694 H3BSH0 61 aa12.42□□□□□ -0.42
GPC1-208ENST00000469694 ZNF208O43345 1280 aa12.42□□□□□ -0.42
GPC1-208ENST00000469694 MT-ND4LP03901 98 aa12.42□□□□□ -0.42
GPC1-208ENST00000469694 CD14P08571 375 aa12.42□□□□□ -0.42
GPC1-208ENST00000469694 SFTA3P0C7M3 94 aa12.42□□□□□ -0.42
GPC1-208ENST00000469694 CAV2P51636 162 aa12.42□□□□□ -0.42
GPC1-208ENST00000469694 HGFACQ04756 655 aa12.42□□□□□ -0.42
GPC1-208ENST00000469694 LCN10Q6JVE6 187 aa12.42□□□□□ -0.42
GPC1-208ENST00000469694 ETV3LQ6ZN32 361 aa12.42□□□□□ -0.42
GPC1-208ENST00000469694 CARFQ8N187 725 aa12.42□□□□□ -0.42
GPC1-208ENST00000469694 TMEM229BQ8NBD8 167 aa12.42□□□□□ -0.42
GPC1-208ENST00000469694 IFI44Q8TCB0 444 aa12.42□□□□□ -0.42
GPC1-208ENST00000469694 LAT2Q9GZY6 243 aa12.42□□□□□ -0.42
GPC1-208ENST00000469694 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.42□□□□□ -0.42
GPC1-208ENST00000469694 MMACHCQ9Y4U1 282 aa12.42□□□□□ -0.42
GPC1-208ENST00000469694 TRBV5-5A0A0J9YX44 114 aa12.42□□□□□ -0.42
GPC1-208ENST00000469694 TEX13DA0A0J9YY54 714 aaPredicted RBP12.42□□□□□ -0.42
GPC1-208ENST00000469694 RNASEK-C17orf49H0YIS7 233 aa12.42□□□□□ -0.42
GPC1-208ENST00000469694 M0QYG6 137 aa12.42□□□□□ -0.42
GPC1-208ENST00000469694 SCRG1O75711 98 aa12.42□□□□□ -0.42
GPC1-208ENST00000469694 AMY2AP04746 511 aa12.42□□□□□ -0.42
GPC1-208ENST00000469694 HPGDP15428 266 aa12.42□□□□□ -0.42
GPC1-208ENST00000469694 ELAVL1Q15717 326 aaKnown RBP12.42□□□□□ -0.42
GPC1-208ENST00000469694 KMT5CQ86Y97 462 aa12.42□□□□□ -0.42
GPC1-208ENST00000469694 GALNT16Q8N428 558 aa12.42□□□□□ -0.42
GPC1-208ENST00000469694 OR5AK2Q8NH90 309 aa12.42□□□□□ -0.42
GPC1-208ENST00000469694 CYTL1Q9NRR1 136 aa12.42□□□□□ -0.42
GPC1-208ENST00000469694 RPP14O95059 124 aaKnown RBP12.41□□□□□ -0.42
GPC1-208ENST00000469694 KLK3P07288 261 aaPredicted RBP12.41□□□□□ -0.42
GPC1-208ENST00000469694 ZNF735P0CB33 412 aa12.41□□□□□ -0.42
GPC1-208ENST00000469694 PMELP40967 661 aa12.41□□□□□ -0.42
GPC1-208ENST00000469694 PNLIPRP3Q17RR3 467 aa12.41□□□□□ -0.42
GPC1-208ENST00000469694 C9orf152Q5JTZ5 239 aa12.41□□□□□ -0.42
GPC1-208ENST00000469694 TMEM244Q5VVB8 128 aa12.41□□□□□ -0.42
GPC1-208ENST00000469694 OR4K17Q8NGC6 315 aa12.41□□□□□ -0.42
GPC1-208ENST00000469694 ADIPOR1Q96A54 375 aa12.41□□□□□ -0.42
GPC1-208ENST00000469694 PFDN5Q99471 154 aa12.41□□□□□ -0.42
GPC1-208ENST00000469694 HRH4Q9H3N8 390 aa12.41□□□□□ -0.42
GPC1-208ENST00000469694 TMPRSS5Q9H3S3 457 aa12.41□□□□□ -0.42
GPC1-208ENST00000469694 TREM2Q9NZC2 230 aa12.41□□□□□ -0.42
GPC1-208ENST00000469694 LPAR3Q9UBY5 353 aa12.41□□□□□ -0.42
GPC1-208ENST00000469694 CDV3Q9UKY7 258 aaKnown RBP12.41□□□□□ -0.42
GPC1-208ENST00000469694 IER3IP1Q9Y5U9 82 aa12.41□□□□□ -0.42
GPC1-208ENST00000469694 MCIDASD6RGH6 385 aa12.41□□□□□ -0.42
GPC1-208ENST00000469694 WISP1O95388 367 aa12.41□□□□□ -0.42
GPC1-208ENST00000469694 RD3LP0DJH9 198 aa12.41□□□□□ -0.42
GPC1-208ENST00000469694 NQO2P16083 231 aa12.41□□□□□ -0.42
GPC1-208ENST00000469694 ZNF14P17017 642 aaPredicted RBP12.41□□□□□ -0.42
GPC1-208ENST00000469694 CPT2P23786 658 aa12.41□□□□□ -0.42
GPC1-208ENST00000469694 AVPR2P30518 371 aa12.41□□□□□ -0.42
GPC1-208ENST00000469694 PPICP45877 212 aa12.41□□□□□ -0.42
GPC1-208ENST00000469694 POU3F4P49335 361 aa12.41□□□□□ -0.42
GPC1-208ENST00000469694 EBPQ15125 230 aaKnown RBP12.41□□□□□ -0.42
GPC1-208ENST00000469694 KLHL26Q53HC5 615 aa12.41□□□□□ -0.42
GPC1-208ENST00000469694 OR10K2Q6IF99 312 aa12.41□□□□□ -0.42
GPC1-208ENST00000469694 RHBDD2Q6NTF9 364 aa12.41□□□□□ -0.42
GPC1-208ENST00000469694 SLC29A4Q7RTT9 530 aa12.41□□□□□ -0.42
GPC1-208ENST00000469694 SLC43A2Q8N370 569 aa12.41□□□□□ -0.42
GPC1-208ENST00000469694 ZPLD1Q8TCW7 415 aa12.41□□□□□ -0.42
GPC1-208ENST00000469694 NUDCD2Q8WVJ2 157 aa12.41□□□□□ -0.42
GPC1-208ENST00000469694 SEH1LQ96EE3 360 aa12.41□□□□□ -0.42
GPC1-208ENST00000469694 FRRS1LQ9P0K9 344 aa12.41□□□□□ -0.42
GPC1-208ENST00000469694 ADAMTS20P59510 1910 aa12.4□□□□□ -0.42
GPC1-208ENST00000469694 MPDZO75970 2070 aa12.4□□□□□ -0.42
GPC1-208ENST00000469694 UTS2O95399 124 aa12.4□□□□□ -0.42
GPC1-208ENST00000469694 BTF3P20290 206 aaKnown RBP12.4□□□□□ -0.42
GPC1-208ENST00000469694 ZBTB25P24278 435 aa12.4□□□□□ -0.42
GPC1-208ENST00000469694 AQP2P41181 271 aa12.4□□□□□ -0.42
GPC1-208ENST00000469694 ALKBH1Q13686 389 aaKnown RBP12.4□□□□□ -0.42
GPC1-208ENST00000469694 NKAIN1Q4KMZ8 207 aa12.4□□□□□ -0.42
GPC1-208ENST00000469694 OR52W1Q6IF63 320 aa12.4□□□□□ -0.42
GPC1-208ENST00000469694 OR13C8Q8NGS7 320 aa12.4□□□□□ -0.42
GPC1-208ENST00000469694 OR6K6Q8NGW6 343 aa12.4□□□□□ -0.42
GPC1-208ENST00000469694 NUBPLQ8TB37 319 aa12.4□□□□□ -0.42
GPC1-208ENST00000469694 SLC46A1Q96NT5 459 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms