RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 UNC79Q9P2D8 2635 aa7.05□□□□□ -1.28
HDAC6-216ENST00000468949 IGHV2OR16-5A0A0B4J2B6 119 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 TRBV2A0A0J9YWF9 115 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 PNMA8CA0A1B0GUJ8 204 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 J3QW42 95 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 ABCD4O14678 606 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 MAGEB4O15481 346 aaPredicted RBP7.04□□□□□ -1.28
HDAC6-216ENST00000468949 XRCC2O43543 280 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 ATE1O95260 518 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 CLPTM1O96005 669 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 IGLV1-44P01699 117 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 LCKP06239 509 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 DBHP09172 617 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 ACSM4P0C7M7 580 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 FAM157BP0CG42 384 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 UBCP0CG48 685 aaKnown RBP7.04□□□□□ -1.28
HDAC6-216ENST00000468949 LIMS3P0CW19 117 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 LIMS4P0CW20 117 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 SLC2A1P11166 492 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 EPXP11678 715 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 CRYGSP22914 178 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 CFL1P23528 166 aaKnown RBP7.04□□□□□ -1.28
HDAC6-216ENST00000468949 CD40P25942 277 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 DCTDP32321 178 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 PSMB10P40306 273 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 RAD52P43351 418 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 MAP2K4P45985 399 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 SELENOVP59797 346 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 BDH1Q02338 343 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 BSPH1Q075Z2 132 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 SNTB2Q13425 540 aaKnown RBP7.04□□□□□ -1.28
HDAC6-216ENST00000468949 SPHARQ15513 63 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 LIPNQ5VXI9 398 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 RNLSQ5VYX0 342 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 ADAM5Q6NVV9 412 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 VHLLQ6RSH7 139 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 SEZ6L2Q6UXD5 910 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 KCTD8Q6ZWB6 473 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 MRPL21Q7Z2W9 205 aaKnown RBP7.04□□□□□ -1.28
HDAC6-216ENST00000468949 EGFL6Q8IUX8 553 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 ZNF584Q8IVC4 421 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 DMRTC2Q8IXT2 367 aaPredicted RBP7.04□□□□□ -1.28
HDAC6-216ENST00000468949 C1orf174Q8IYL3 243 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 SPARTQ8N0X7 666 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 ZNF676Q8N7Q3 588 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 NANOGP1Q8N7R0 232 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 CPEB3Q8NE35 698 aaKnown RBP7.04□□□□□ -1.28
HDAC6-216ENST00000468949 OR52H1Q8NGJ2 320 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 OR10S1Q8NGN2 331 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 AKAP1Q92667 903 aaKnown RBP eCLIP7.04□□□□□ -1.28
HDAC6-216ENST00000468949 APOBEC3DQ96AK3 386 aaPredicted RBP7.04□□□□□ -1.28
HDAC6-216ENST00000468949 PELI1Q96FA3 418 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 PIK3IP1Q96FE7 263 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 POM121L2Q96KW2 1035 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 BCL2L14Q9BZR8 327 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 OPA3Q9H6K4 179 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 ISG20L2Q9H9L3 353 aaKnown RBP7.04□□□□□ -1.28
HDAC6-216ENST00000468949 PLEKHA1Q9HB21 404 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 BABAM2Q9NXR7 383 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 NPAP1Q9NZP6 1156 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 CLEC2DQ9UHP7 191 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 OR52A1Q9UKL2 312 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 RNF115Q9Y4L5 304 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 ATP23Q9Y6H3 246 aa7.04□□□□□ -1.28
HDAC6-216ENST00000468949 CACNA1CQ13936 2221 aa7.03□□□□□ -1.28
HDAC6-216ENST00000468949 LOC100509620A0A075B734 347 aa7.03□□□□□ -1.28
HDAC6-216ENST00000468949 A0A1B0GVI7 797 aa7.03□□□□□ -1.28
HDAC6-216ENST00000468949 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.03□□□□□ -1.28
HDAC6-216ENST00000468949 ACOD1A6NK06 481 aa7.03□□□□□ -1.28
HDAC6-216ENST00000468949 TMEM212A6NML5 194 aa7.03□□□□□ -1.28
HDAC6-216ENST00000468949 ATP6V1G2-DDX39BF2Z307 99 aa7.03□□□□□ -1.28
HDAC6-216ENST00000468949 NOL3O60936 208 aaKnown RBP7.03□□□□□ -1.28
HDAC6-216ENST00000468949 MTRF1O75570 445 aaKnown RBP7.03□□□□□ -1.28
HDAC6-216ENST00000468949 GOSR1O95249 250 aa7.03□□□□□ -1.28
HDAC6-216ENST00000468949 THBDP07204 575 aa7.03□□□□□ -1.28
HDAC6-216ENST00000468949 PCSK6P29122 969 aa7.03□□□□□ -1.28
HDAC6-216ENST00000468949 GCH1P30793 250 aa7.03□□□□□ -1.28
HDAC6-216ENST00000468949 TGM4P49221 684 aa7.03□□□□□ -1.28
HDAC6-216ENST00000468949 PPP1CBP62140 327 aa7.03□□□□□ -1.28
HDAC6-216ENST00000468949 PRR20EP86478 221 aa7.03□□□□□ -1.28
HDAC6-216ENST00000468949 PRR20CP86479 221 aa7.03□□□□□ -1.28
HDAC6-216ENST00000468949 PRR20DP86480 221 aa7.03□□□□□ -1.28
HDAC6-216ENST00000468949 PRR20BP86481 221 aa7.03□□□□□ -1.28
HDAC6-216ENST00000468949 PRR20AP86496 221 aa7.03□□□□□ -1.28
HDAC6-216ENST00000468949 SLC3A1Q07837 685 aa7.03□□□□□ -1.28
HDAC6-216ENST00000468949 MFGE8Q08431 387 aaPredicted RBP7.03□□□□□ -1.28
HDAC6-216ENST00000468949 MLLT11Q13015 90 aaPredicted RBP7.03□□□□□ -1.28
HDAC6-216ENST00000468949 ALKBH1Q13686 389 aaKnown RBP7.03□□□□□ -1.28
HDAC6-216ENST00000468949 ODF4Q2M2E3 257 aa7.03□□□□□ -1.28
HDAC6-216ENST00000468949 CCDC58Q4VC31 144 aa7.03□□□□□ -1.28
HDAC6-216ENST00000468949 RGS7BPQ6MZT1 257 aaPredicted RBP7.03□□□□□ -1.28
HDAC6-216ENST00000468949 RPL22L1Q6P5R6 122 aaKnown RBP7.03□□□□□ -1.28
HDAC6-216ENST00000468949 ZNF704Q6ZNC4 412 aaPredicted RBP7.03□□□□□ -1.28
HDAC6-216ENST00000468949 MYPOPQ86VE0 399 aaPredicted RBP7.03□□□□□ -1.28
HDAC6-216ENST00000468949 OR1J1Q8NGS3 322 aa7.03□□□□□ -1.28
HDAC6-216ENST00000468949 OR5AK2Q8NH90 309 aa7.03□□□□□ -1.28
HDAC6-216ENST00000468949 TSEN15Q8WW01 171 aaKnown RBP7.03□□□□□ -1.28
HDAC6-216ENST00000468949 HPS1Q92902 700 aa7.03□□□□□ -1.28
HDAC6-216ENST00000468949 PBOV1Q9GZY1 135 aa7.03□□□□□ -1.28
HDAC6-216ENST00000468949 RGCCQ9H4X1 137 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms