RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 ZNF138P52744 262 aa3.21□□□□□ -1.9
LSM5-209ENST00000468872 ZNF726P1Q15940 193 aa3.21□□□□□ -1.9
LSM5-209ENST00000468872 HSDL1Q3SXM5 330 aa3.21□□□□□ -1.9
LSM5-209ENST00000468872 TMEM53Q6P2H8 277 aa3.21□□□□□ -1.9
LSM5-209ENST00000468872 NCCRP1Q6ZVX7 275 aaPredicted RBP3.21□□□□□ -1.9
LSM5-209ENST00000468872 ABHD13Q7L211 337 aa3.21□□□□□ -1.9
LSM5-209ENST00000468872 HDDC2Q7Z4H3 204 aa3.21□□□□□ -1.9
LSM5-209ENST00000468872 PCP2Q8IVA1 136 aa3.21□□□□□ -1.9
LSM5-209ENST00000468872 ENTHD1Q8IYW4 607 aa3.21□□□□□ -1.9
LSM5-209ENST00000468872 GABRG1Q8N1C3 465 aa3.21□□□□□ -1.9
LSM5-209ENST00000468872 Q8N976 141 aa3.21□□□□□ -1.9
LSM5-209ENST00000468872 Q8N9L7 120 aa3.21□□□□□ -1.9
LSM5-209ENST00000468872 OR10J6PQ8NGY7 276 aa3.21□□□□□ -1.9
LSM5-209ENST00000468872 STARD8Q92502 1023 aa3.21□□□□□ -1.9
LSM5-209ENST00000468872 C8orf44Q96CB5 159 aa3.21□□□□□ -1.9
LSM5-209ENST00000468872 MTG1Q9BT17 334 aaPredicted RBP3.21□□□□□ -1.9
LSM5-209ENST00000468872 PLA2G2FQ9BZM2 168 aa3.21□□□□□ -1.9
LSM5-209ENST00000468872 LINC00597Q9H2U6 94 aa3.21□□□□□ -1.9
LSM5-209ENST00000468872 MTCH1Q9NZJ7 389 aa3.21□□□□□ -1.9
LSM5-209ENST00000468872 ZNF223Q9UK11 482 aaPredicted RBP3.21□□□□□ -1.9
LSM5-209ENST00000468872 SLC17A4Q9Y2C5 497 aa3.21□□□□□ -1.9
LSM5-209ENST00000468872 COL1A1P02452 1464 aaPredicted RBP3.21□□□□□ -1.9
LSM5-209ENST00000468872 ADGRB1O14514 1584 aa3.21□□□□□ -1.9
LSM5-209ENST00000468872 MAPK8IP3Q9UPT6 1336 aa3.2□□□□□ -1.9
LSM5-209ENST00000468872 AKAP12Q02952 1782 aa3.2□□□□□ -1.9
LSM5-209ENST00000468872 POLQO75417 2590 aa3.2□□□□□ -1.9
LSM5-209ENST00000468872 WDR87Q6ZQQ6 2873 aa3.2□□□□□ -1.9
LSM5-209ENST00000468872 TEX46H3BTG2 121 aa3.2□□□□□ -1.9
LSM5-209ENST00000468872 NUPL2O15504 423 aaKnown RBP3.2□□□□□ -1.9
LSM5-209ENST00000468872 CLDN11O75508 207 aa3.2□□□□□ -1.9
LSM5-209ENST00000468872 RAB3DO95716 219 aa3.2□□□□□ -1.9
LSM5-209ENST00000468872 FABP3P05413 133 aa3.2□□□□□ -1.9
LSM5-209ENST00000468872 SERPINE2P07093 398 aa3.2□□□□□ -1.9
LSM5-209ENST00000468872 EIF2S2P20042 333 aaKnown RBP3.2□□□□□ -1.9
LSM5-209ENST00000468872 CDKN2BP42772 138 aa3.2□□□□□ -1.9
LSM5-209ENST00000468872 UCNP55089 124 aa3.2□□□□□ -1.9
LSM5-209ENST00000468872 EIF3EP60228 445 aaKnown RBP3.2□□□□□ -1.9
LSM5-209ENST00000468872 GGTLC2Q14390 218 aa3.2□□□□□ -1.9
LSM5-209ENST00000468872 SF3A2Q15428 464 aaKnown RBP3.2□□□□□ -1.9
LSM5-209ENST00000468872 PTPN20Q4JDL3 420 aa3.2□□□□□ -1.9
LSM5-209ENST00000468872 HES5Q5TA89 166 aa3.2□□□□□ -1.9
LSM5-209ENST00000468872 TSPO2Q5TGU0 170 aa3.2□□□□□ -1.9
LSM5-209ENST00000468872 AGBL2Q5U5Z8 902 aa3.2□□□□□ -1.9
LSM5-209ENST00000468872 CLEC2AQ6UVW9 174 aa3.2□□□□□ -1.9
LSM5-209ENST00000468872 PQLC3Q8N755 202 aa3.2□□□□□ -1.9
LSM5-209ENST00000468872 OR10G4Q8NGN3 311 aa3.2□□□□□ -1.9
LSM5-209ENST00000468872 OR2A1Q8NGT9 310 aa3.2□□□□□ -1.9
LSM5-209ENST00000468872 LYPD6BQ8NI32 183 aa3.2□□□□□ -1.9
LSM5-209ENST00000468872 NUBPLQ8TB37 319 aa3.2□□□□□ -1.9
LSM5-209ENST00000468872 ZNF596Q8TC21 504 aa3.2□□□□□ -1.9
LSM5-209ENST00000468872 CREB3L1Q96BA8 519 aa3.2□□□□□ -1.9
LSM5-209ENST00000468872 CHAC1Q9BUX1 264 aa3.2□□□□□ -1.9
LSM5-209ENST00000468872 TPK1Q9H3S4 243 aa3.2□□□□□ -1.9
LSM5-209ENST00000468872 NCOR1P1Q9H4R4 102 aa3.2□□□□□ -1.9
LSM5-209ENST00000468872 AUNIPQ9H7T9 357 aa3.2□□□□□ -1.9
LSM5-209ENST00000468872 RETNQ9HD89 108 aa3.2□□□□□ -1.9
LSM5-209ENST00000468872 SLC40A1Q9NP59 571 aa3.2□□□□□ -1.9
LSM5-209ENST00000468872 DDX18Q9NVP1 670 aaKnown RBP3.2□□□□□ -1.9
LSM5-209ENST00000468872 CCDC59Q9P031 241 aaKnown RBP3.2□□□□□ -1.9
LSM5-209ENST00000468872 MN1Q10571 1320 aaPredicted RBP3.19□□□□□ -1.9
LSM5-209ENST00000468872 CDC42BPAQ5VT25 1732 aa3.19□□□□□ -1.9
LSM5-209ENST00000468872 CRYBG1Q9Y4K1 1723 aa3.19□□□□□ -1.9
LSM5-209ENST00000468872 MYO5BQ9ULV0 1848 aa3.19□□□□□ -1.9
LSM5-209ENST00000468872 SCAMP2O15127 329 aaKnown RBP3.19□□□□□ -1.9
LSM5-209ENST00000468872 ICOSLGO75144 302 aa3.19□□□□□ -1.9
LSM5-209ENST00000468872 FKBP6O75344 327 aa3.19□□□□□ -1.9
LSM5-209ENST00000468872 ASGR1P07306 291 aa3.19□□□□□ -1.9
LSM5-209ENST00000468872 HOXC4P09017 264 aaPredicted RBP3.19□□□□□ -1.9
LSM5-209ENST00000468872 TLX1NBP0CAT3 122 aa3.19□□□□□ -1.9
LSM5-209ENST00000468872 OR5H8P0DN80 308 aa3.19□□□□□ -1.9
LSM5-209ENST00000468872 PRPS2P11908 318 aa3.19□□□□□ -1.9
LSM5-209ENST00000468872 NAMPTP43490 491 aa3.19□□□□□ -1.9
LSM5-209ENST00000468872 MRPL19P49406 292 aaKnown RBP3.19□□□□□ -1.9
LSM5-209ENST00000468872 CSNK1EP49674 416 aaKnown RBP3.19□□□□□ -1.9
LSM5-209ENST00000468872 STXBP1P61764 594 aaKnown RBP3.19□□□□□ -1.9
LSM5-209ENST00000468872 MAB21L1Q13394 359 aa3.19□□□□□ -1.9
LSM5-209ENST00000468872 IL18Q14116 193 aa3.19□□□□□ -1.9
LSM5-209ENST00000468872 OR7A5Q15622 319 aa3.19□□□□□ -1.9
LSM5-209ENST00000468872 DNAJC24Q6P3W2 148 aa3.19□□□□□ -1.9
LSM5-209ENST00000468872 MBOAT1Q6ZNC8 495 aa3.19□□□□□ -1.9
LSM5-209ENST00000468872 SSX9Q7RTT3 188 aa3.19□□□□□ -1.9
LSM5-209ENST00000468872 CMC1Q7Z7K0 106 aa3.19□□□□□ -1.9
LSM5-209ENST00000468872 TMEM150AQ86TG1 271 aa3.19□□□□□ -1.9
LSM5-209ENST00000468872 AGR3Q8TD06 166 aa3.19□□□□□ -1.9
LSM5-209ENST00000468872 ECHDC3Q96DC8 303 aa3.19□□□□□ -1.9
LSM5-209ENST00000468872 BMFQ96LC9 184 aa3.19□□□□□ -1.9
LSM5-209ENST00000468872 TEKT3Q9BXF9 490 aa3.19□□□□□ -1.9
LSM5-209ENST00000468872 NOX3Q9HBY0 568 aa3.19□□□□□ -1.9
LSM5-209ENST00000468872 C20orf96Q9NUD7 363 aaPredicted RBP3.19□□□□□ -1.9
LSM5-209ENST00000468872 CARMIL3Q8ND23 1372 aa3.19□□□□□ -1.9
LSM5-209ENST00000468872 PRXQ9BXM0 1461 aa3.19□□□□□ -1.9
LSM5-209ENST00000468872 TRPM7Q96QT4 1865 aa3.19□□□□□ -1.9
LSM5-209ENST00000468872 ARHGAP21Q5T5U3 1957 aa3.19□□□□□ -1.9
LSM5-209ENST00000468872 SCN4AP35499 1836 aa3.19□□□□□ -1.9
LSM5-209ENST00000468872 PHLPP2Q6ZVD8 1323 aa3.19□□□□□ -1.9
LSM5-209ENST00000468872 WDR19Q8NEZ3 1342 aa3.19□□□□□ -1.9
LSM5-209ENST00000468872 RP1L1Q8IWN7 2480 aaPredicted RBP3.18□□□□□ -1.9
LSM5-209ENST00000468872 CACNA1HO95180 2353 aa3.18□□□□□ -1.9
LSM5-209ENST00000468872 COL4A4P53420 1690 aaPredicted RBP3.18□□□□□ -1.9
LSM5-209ENST00000468872 ABCA2Q9BZC7 2435 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms