RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 OR6C68A6NDL8 312 aa14.72□□□□□ -0.05
COL7A1-206ENST00000466591 H0YL77 283 aa14.72□□□□□ -0.05
COL7A1-206ENST00000466591 M0R135 149 aa14.72□□□□□ -0.05
COL7A1-206ENST00000466591 ACSM4P0C7M7 580 aa14.72□□□□□ -0.05
COL7A1-206ENST00000466591 ZNF12P17014 697 aa14.72□□□□□ -0.05
COL7A1-206ENST00000466591 PRSS12P56730 875 aa14.72□□□□□ -0.05
COL7A1-206ENST00000466591 UBA52P62987 128 aaKnown RBP14.72□□□□□ -0.05
COL7A1-206ENST00000466591 HIST1H3AP68431 136 aa14.72□□□□□ -0.05
COL7A1-206ENST00000466591 HIST2H3PS2Q5TEC6 136 aa14.72□□□□□ -0.05
COL7A1-206ENST00000466591 LRRN1Q6UXK5 716 aa14.72□□□□□ -0.05
COL7A1-206ENST00000466591 CYP2R1Q6VVX0 501 aa14.72□□□□□ -0.05
COL7A1-206ENST00000466591 HIST2H3AQ71DI3 136 aa14.72□□□□□ -0.05
COL7A1-206ENST00000466591 KLBQ86Z14 1044 aa14.72□□□□□ -0.05
COL7A1-206ENST00000466591 BOLLQ8N9W6 283 aaKnown RBP14.72□□□□□ -0.05
COL7A1-206ENST00000466591 ZNF799Q96GE5 643 aa14.72□□□□□ -0.05
COL7A1-206ENST00000466591 COPS4Q9BT78 406 aa14.72□□□□□ -0.05
COL7A1-206ENST00000466591 MMADHCQ9H3L0 296 aaPredicted RBP14.72□□□□□ -0.05
COL7A1-206ENST00000466591 EGLN3Q9H6Z9 239 aa14.72□□□□□ -0.05
COL7A1-206ENST00000466591 KIF17Q9P2E2 1029 aa14.72□□□□□ -0.05
COL7A1-206ENST00000466591 CDH10Q9Y6N8 788 aa14.72□□□□□ -0.05
COL7A1-206ENST00000466591 TMEM89A2RUT3 159 aa14.71□□□□□ -0.05
COL7A1-206ENST00000466591 A8MXK9 166 aa14.71□□□□□ -0.05
COL7A1-206ENST00000466591 TRAPPC2LH3BP13 241 aa14.71□□□□□ -0.05
COL7A1-206ENST00000466591 CCNB2O95067 398 aa14.71□□□□□ -0.05
COL7A1-206ENST00000466591 SPARCP09486 303 aa14.71□□□□□ -0.05
COL7A1-206ENST00000466591 CPT2P23786 658 aa14.71□□□□□ -0.05
COL7A1-206ENST00000466591 PYCR1P32322 319 aa14.71□□□□□ -0.05
COL7A1-206ENST00000466591 MTNR1AP48039 350 aa14.71□□□□□ -0.05
COL7A1-206ENST00000466591 PITPNBP48739 271 aa14.71□□□□□ -0.05
COL7A1-206ENST00000466591 GK2Q14410 553 aaPredicted RBP14.71□□□□□ -0.05
COL7A1-206ENST00000466591 KCNJ8Q15842 424 aa14.71□□□□□ -0.05
COL7A1-206ENST00000466591 PGBD2Q6P3X8 592 aa14.71□□□□□ -0.05
COL7A1-206ENST00000466591 ZBTB46Q86UZ6 589 aa14.71□□□□□ -0.05
COL7A1-206ENST00000466591 LNX2Q8N448 690 aa14.71□□□□□ -0.05
COL7A1-206ENST00000466591 CYB561A3Q8NBI2 242 aa14.71□□□□□ -0.05
COL7A1-206ENST00000466591 DUX5Q96PT3 197 aa14.71□□□□□ -0.05
COL7A1-206ENST00000466591 FUZQ9BT04 418 aa14.71□□□□□ -0.05
COL7A1-206ENST00000466591 C1QTNF5Q9BXJ0 243 aa14.71□□□□□ -0.05
COL7A1-206ENST00000466591 PLA2G12AQ9BZM1 189 aa14.71□□□□□ -0.05
COL7A1-206ENST00000466591 SLC22A4Q9H015 551 aa14.71□□□□□ -0.05
COL7A1-206ENST00000466591 ZMAT3Q9HA38 289 aaKnown RBP14.71□□□□□ -0.05
COL7A1-206ENST00000466591 FN3KRPQ9HA64 309 aa14.71□□□□□ -0.05
COL7A1-206ENST00000466591 UFSP2Q9NUQ7 469 aa14.71□□□□□ -0.05
COL7A1-206ENST00000466591 CLN8Q9UBY8 286 aa14.71□□□□□ -0.05
COL7A1-206ENST00000466591 CYB5R1Q9UHQ9 305 aa14.71□□□□□ -0.05
COL7A1-206ENST00000466591 IGHV3OR16-10A0A075B7F0 116 aa14.7□□□□□ -0.06
COL7A1-206ENST00000466591 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.7□□□□□ -0.06
COL7A1-206ENST00000466591 MLNRO43193 412 aa14.7□□□□□ -0.06
COL7A1-206ENST00000466591 IFNGP01579 166 aa14.7□□□□□ -0.06
COL7A1-206ENST00000466591 SEMG1P04279 462 aa14.7□□□□□ -0.06
COL7A1-206ENST00000466591 GSSP48637 474 aa14.7□□□□□ -0.06
COL7A1-206ENST00000466591 DBPQ10586 325 aaPredicted RBP14.7□□□□□ -0.06
COL7A1-206ENST00000466591 FOXL1Q12952 345 aa14.7□□□□□ -0.06
COL7A1-206ENST00000466591 SPATS1Q496A3 300 aa14.7□□□□□ -0.06
COL7A1-206ENST00000466591 PARP8Q8N3A8 854 aa14.7□□□□□ -0.06
COL7A1-206ENST00000466591 OR9Q2Q8NGE9 314 aa14.7□□□□□ -0.06
COL7A1-206ENST00000466591 OR6K6Q8NGW6 343 aa14.7□□□□□ -0.06
COL7A1-206ENST00000466591 ERGIC1Q969X5 290 aa14.7□□□□□ -0.06
COL7A1-206ENST00000466591 SLC25A28Q96A46 364 aa14.7□□□□□ -0.06
COL7A1-206ENST00000466591 OTULINQ96BN8 352 aa14.7□□□□□ -0.06
COL7A1-206ENST00000466591 TECTBQ96PL2 329 aa14.7□□□□□ -0.06
COL7A1-206ENST00000466591 TMEM246Q9BRR3 403 aa14.7□□□□□ -0.06
COL7A1-206ENST00000466591 ADAT1Q9BUB4 502 aaKnown RBP14.7□□□□□ -0.06
COL7A1-206ENST00000466591 CENPMQ9NSP4 180 aa14.7□□□□□ -0.06
COL7A1-206ENST00000466591 ARL8BQ9NVJ2 186 aa14.7□□□□□ -0.06
COL7A1-206ENST00000466591 ZNF69Q9UC07 566 aa14.7□□□□□ -0.06
COL7A1-206ENST00000466591 TVP23AA6NH52 213 aa14.69□□□□□ -0.06
COL7A1-206ENST00000466591 A6NLC8 198 aa14.69□□□□□ -0.06
COL7A1-206ENST00000466591 F5H0A9 414 aaPredicted RBP14.69□□□□□ -0.06
COL7A1-206ENST00000466591 WNT2P09544 360 aa14.69□□□□□ -0.06
COL7A1-206ENST00000466591 CA6P23280 308 aa14.69□□□□□ -0.06
COL7A1-206ENST00000466591 FMO3P31513 532 aa14.69□□□□□ -0.06
COL7A1-206ENST00000466591 COMPP49747 757 aaPredicted RBP14.69□□□□□ -0.06
COL7A1-206ENST00000466591 MZT1Q08AG7 82 aa14.69□□□□□ -0.06
COL7A1-206ENST00000466591 OR8B8Q15620 311 aa14.69□□□□□ -0.06
COL7A1-206ENST00000466591 ZNF181Q2M3W8 571 aa14.69□□□□□ -0.06
COL7A1-206ENST00000466591 ZDHHC22Q8N966 263 aa14.69□□□□□ -0.06
COL7A1-206ENST00000466591 AQP11Q8NBQ7 271 aa14.69□□□□□ -0.06
COL7A1-206ENST00000466591 OR51L1Q8NGJ5 315 aa14.69□□□□□ -0.06
COL7A1-206ENST00000466591 OR9Q1Q8NGQ5 310 aa14.69□□□□□ -0.06
COL7A1-206ENST00000466591 SGMS2Q8NHU3 365 aa14.69□□□□□ -0.06
COL7A1-206ENST00000466591 ZDHHC16Q969W1 377 aa14.69□□□□□ -0.06
COL7A1-206ENST00000466591 REEP1Q9H902 201 aa14.69□□□□□ -0.06
COL7A1-206ENST00000466591 TMEM165Q9HC07 324 aa14.69□□□□□ -0.06
COL7A1-206ENST00000466591 POLR3KQ9Y2Y1 108 aaPredicted RBP14.69□□□□□ -0.06
COL7A1-206ENST00000466591 WNK2Q9Y3S1 2297 aa14.68□□□□□ -0.06
COL7A1-206ENST00000466591 TRAV40A0A0B4J280 105 aa14.68□□□□□ -0.06
COL7A1-206ENST00000466591 hCG_1807616A0A1W2PRN6 198 aa14.68□□□□□ -0.06
COL7A1-206ENST00000466591 DNAJC9-AS1A6NH13 148 aa14.68□□□□□ -0.06
COL7A1-206ENST00000466591 FSHBP01225 129 aa14.68□□□□□ -0.06
COL7A1-206ENST00000466591 HSD11B1P28845 292 aa14.68□□□□□ -0.06
COL7A1-206ENST00000466591 RPS27P42677 84 aaKnown RBP14.68□□□□□ -0.06
COL7A1-206ENST00000466591 ZNF404Q494X3 552 aa14.68□□□□□ -0.06
COL7A1-206ENST00000466591 AWAT1Q58HT5 328 aa14.68□□□□□ -0.06
COL7A1-206ENST00000466591 FAM201AQ5SY85 155 aa14.68□□□□□ -0.06
COL7A1-206ENST00000466591 PRAMEF6Q5VXH4 476 aa14.68□□□□□ -0.06
COL7A1-206ENST00000466591 DCDC5Q6ZRR9 648 aa14.68□□□□□ -0.06
COL7A1-206ENST00000466591 DCXRQ7Z4W1 244 aa14.68□□□□□ -0.06
COL7A1-206ENST00000466591 NAA40Q86UY6 237 aa14.68□□□□□ -0.06
COL7A1-206ENST00000466591 CELF2-AS1Q8N7Q2 184 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms