RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 NKAIN4Q8IVV8 208 aa2.29□□□□□ -2.04
LRCH3-211ENST00000466054 FAM71AQ8IYT1 594 aa2.29□□□□□ -2.04
LRCH3-211ENST00000466054 OR10G6Q8NH81 332 aa2.29□□□□□ -2.04
LRCH3-211ENST00000466054 CIRBP-AS1Q8TBR5 109 aa2.29□□□□□ -2.04
LRCH3-211ENST00000466054 NRGNQ92686 78 aa2.29□□□□□ -2.04
LRCH3-211ENST00000466054 PANX1Q96RD7 426 aa2.29□□□□□ -2.04
LRCH3-211ENST00000466054 TIMM29Q9BSF4 260 aa2.29□□□□□ -2.04
LRCH3-211ENST00000466054 RSG1Q9BU20 258 aa2.29□□□□□ -2.04
LRCH3-211ENST00000466054 TMEM38AQ9H6F2 299 aa2.29□□□□□ -2.04
LRCH3-211ENST00000466054 RETNQ9HD89 108 aa2.29□□□□□ -2.04
LRCH3-211ENST00000466054 GCNT4Q9P109 453 aa2.29□□□□□ -2.04
LRCH3-211ENST00000466054 DUX4Q9UBX2 424 aa2.29□□□□□ -2.04
LRCH3-211ENST00000466054 CLN8Q9UBY8 286 aa2.29□□□□□ -2.04
LRCH3-211ENST00000466054 WIF1Q9Y5W5 379 aa2.29□□□□□ -2.04
LRCH3-211ENST00000466054 IGHV3OR16-9A0A0B4J2B5 98 aa2.28□□□□□ -2.04
LRCH3-211ENST00000466054 A0A0J9YXV3 536 aa2.28□□□□□ -2.04
LRCH3-211ENST00000466054 CCNB2O95067 398 aa2.28□□□□□ -2.04
LRCH3-211ENST00000466054 LSM8O95777 96 aaKnown RBP2.28□□□□□ -2.04
LRCH3-211ENST00000466054 HBE1P02100 147 aa2.28□□□□□ -2.04
LRCH3-211ENST00000466054 ERCC1P07992 297 aaPredicted RBP2.28□□□□□ -2.04
LRCH3-211ENST00000466054 IL32P24001 234 aa2.28□□□□□ -2.04
LRCH3-211ENST00000466054 HMOX2P30519 316 aa2.28□□□□□ -2.04
LRCH3-211ENST00000466054 RAB9AP51151 201 aa2.28□□□□□ -2.04
LRCH3-211ENST00000466054 GFERP55789 205 aa2.28□□□□□ -2.04
LRCH3-211ENST00000466054 ZNF121P58317 390 aaPredicted RBP2.28□□□□□ -2.04
LRCH3-211ENST00000466054 TAS2R31P59538 309 aa2.28□□□□□ -2.04
LRCH3-211ENST00000466054 TMEM256Q8N2U0 113 aa2.28□□□□□ -2.04
LRCH3-211ENST00000466054 JAGN1Q8N5M9 183 aa2.28□□□□□ -2.04
LRCH3-211ENST00000466054 OR51E1Q8TCB6 317 aa2.28□□□□□ -2.04
LRCH3-211ENST00000466054 NRBF2Q96F24 287 aa2.28□□□□□ -2.04
LRCH3-211ENST00000466054 BTN2A3PQ96KV6 586 aa2.28□□□□□ -2.04
LRCH3-211ENST00000466054 ZNF717Q9BY31 904 aaPredicted RBP2.28□□□□□ -2.04
LRCH3-211ENST00000466054 FGF23Q9GZV9 251 aaPredicted RBP2.28□□□□□ -2.04
LRCH3-211ENST00000466054 TMEM27Q9HBJ8 222 aa2.28□□□□□ -2.04
LRCH3-211ENST00000466054 SLC38A10Q9HBR0 1119 aa2.28□□□□□ -2.04
LRCH3-211ENST00000466054 MRM3Q9HC36 420 aaKnown RBP2.28□□□□□ -2.04
LRCH3-211ENST00000466054 WFDC1Q9HC57 220 aa2.28□□□□□ -2.04
LRCH3-211ENST00000466054 CLN6Q9NWW5 311 aa2.28□□□□□ -2.04
LRCH3-211ENST00000466054 SAR1BQ9Y6B6 198 aa2.28□□□□□ -2.04
LRCH3-211ENST00000466054 SCN1AP35498 2009 aa2.27□□□□□ -2.05
LRCH3-211ENST00000466054 NSD2O96028 1365 aa2.27□□□□□ -2.05
LRCH3-211ENST00000466054 KCNE1BA0A087WTH5 132 aa2.27□□□□□ -2.05
LRCH3-211ENST00000466054 IGKV1-8A0A0C4DH67 115 aa2.27□□□□□ -2.05
LRCH3-211ENST00000466054 IGHV7-4-1A0A0J9YVY3 117 aa2.27□□□□□ -2.05
LRCH3-211ENST00000466054 KRBOX1C9JBD0 128 aa2.27□□□□□ -2.05
LRCH3-211ENST00000466054 CACNG3O60359 315 aa2.27□□□□□ -2.05
LRCH3-211ENST00000466054 IGHV3-11P01762 117 aa2.27□□□□□ -2.05
LRCH3-211ENST00000466054 ZNF806P0C7X5 589 aa2.27□□□□□ -2.05
LRCH3-211ENST00000466054 ME2P23368 584 aa2.27□□□□□ -2.05
LRCH3-211ENST00000466054 KIR3DL2P43630 455 aa2.27□□□□□ -2.05
LRCH3-211ENST00000466054 RPL23P62829 140 aaKnown RBP2.27□□□□□ -2.05
LRCH3-211ENST00000466054 CUL2Q13617 745 aa2.27□□□□□ -2.05
LRCH3-211ENST00000466054 RNASE13Q5GAN3 156 aaKnown RBP2.27□□□□□ -2.05
LRCH3-211ENST00000466054 PRR9Q5T870 116 aa2.27□□□□□ -2.05
LRCH3-211ENST00000466054 TWF2Q6IBS0 349 aaKnown RBP2.27□□□□□ -2.05
LRCH3-211ENST00000466054 TMEM220Q6QAJ8 160 aa2.27□□□□□ -2.05
LRCH3-211ENST00000466054 EIF3MQ7L2H7 374 aaKnown RBP2.27□□□□□ -2.05
LRCH3-211ENST00000466054 CSGALNACT2Q8N6G5 542 aa2.27□□□□□ -2.05
LRCH3-211ENST00000466054 OR13G1Q8NGZ3 307 aa2.27□□□□□ -2.05
LRCH3-211ENST00000466054 FOXC2Q99958 501 aa2.27□□□□□ -2.05
LRCH3-211ENST00000466054 SAMD10Q9BYL1 202 aa2.27□□□□□ -2.05
LRCH3-211ENST00000466054 MYOZ1Q9NP98 299 aaPredicted RBP2.27□□□□□ -2.05
LRCH3-211ENST00000466054 C8orf17Q9NRJ1 99 aa2.27□□□□□ -2.05
LRCH3-211ENST00000466054 C20orf96Q9NUD7 363 aaPredicted RBP2.27□□□□□ -2.05
LRCH3-211ENST00000466054 IGHV1-69DA0A0B4J2H0 117 aa2.26□□□□□ -2.05
LRCH3-211ENST00000466054 SYCE1LA8MT33 242 aa2.26□□□□□ -2.05
LRCH3-211ENST00000466054 A8MUU9 505 aa2.26□□□□□ -2.05
LRCH3-211ENST00000466054 M0R3G1 203 aa2.26□□□□□ -2.05
LRCH3-211ENST00000466054 DNALI1O14645 258 aaPredicted RBP2.26□□□□□ -2.05
LRCH3-211ENST00000466054 TAAR5O14804 337 aa2.26□□□□□ -2.05
LRCH3-211ENST00000466054 CHMP2AO43633 222 aa2.26□□□□□ -2.05
LRCH3-211ENST00000466054 EIF1BO60739 113 aaKnown RBP2.26□□□□□ -2.05
LRCH3-211ENST00000466054 GLSO94925 669 aaPredicted RBP2.26□□□□□ -2.05
LRCH3-211ENST00000466054 CD160O95971 181 aa2.26□□□□□ -2.05
LRCH3-211ENST00000466054 CTRB1P17538 263 aa2.26□□□□□ -2.05
LRCH3-211ENST00000466054 RAB4AP20338 218 aa2.26□□□□□ -2.05
LRCH3-211ENST00000466054 TALDO1P37837 337 aa2.26□□□□□ -2.05
LRCH3-211ENST00000466054 EIF1P41567 113 aaKnown RBP2.26□□□□□ -2.05
LRCH3-211ENST00000466054 PPIDQ08752 370 aaKnown RBP2.26□□□□□ -2.05
LRCH3-211ENST00000466054 ZNF616Q08AN1 781 aa2.26□□□□□ -2.05
LRCH3-211ENST00000466054 DGCR6Q14129 220 aa2.26□□□□□ -2.05
LRCH3-211ENST00000466054 KPRPQ5T749 579 aaPredicted RBP2.26□□□□□ -2.05
LRCH3-211ENST00000466054 STUMQ69YW2 141 aa2.26□□□□□ -2.05
LRCH3-211ENST00000466054 C12orf54Q6X4T0 127 aa2.26□□□□□ -2.05
LRCH3-211ENST00000466054 PQLC3Q8N755 202 aa2.26□□□□□ -2.05
LRCH3-211ENST00000466054 SNX31Q8N9S9 440 aa2.26□□□□□ -2.05
LRCH3-211ENST00000466054 TTLQ8NG68 377 aa2.26□□□□□ -2.05
LRCH3-211ENST00000466054 PRRC1Q96M27 445 aa2.26□□□□□ -2.05
LRCH3-211ENST00000466054 RNF145Q96MT1 663 aa2.26□□□□□ -2.05
LRCH3-211ENST00000466054 RBBP8Q99708 897 aa2.26□□□□□ -2.05
LRCH3-211ENST00000466054 GGTLC1Q9BX51 225 aa2.26□□□□□ -2.05
LRCH3-211ENST00000466054 UCK2Q9BZX2 261 aa2.26□□□□□ -2.05
LRCH3-211ENST00000466054 TOLLIPQ9H0E2 274 aa2.26□□□□□ -2.05
LRCH3-211ENST00000466054 EXO5Q9H790 373 aa2.26□□□□□ -2.05
LRCH3-211ENST00000466054 SLC39A1Q9NY26 324 aa2.26□□□□□ -2.05
LRCH3-211ENST00000466054 PDP1Q9P0J1 537 aaPredicted RBP2.26□□□□□ -2.05
LRCH3-211ENST00000466054 SIGLEC9Q9Y336 463 aa2.26□□□□□ -2.05
LRCH3-211ENST00000466054 CBY1Q9Y3M2 126 aa2.26□□□□□ -2.05
LRCH3-211ENST00000466054 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.25□□□□□ -2.05
LRCH3-211ENST00000466054 IGHV3-72A0A0B4J1Y9 119 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms