RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 CHP2O43745 196 aa12.2□□□□□ -0.46
HDAC6-214ENST00000465269 CHST1O43916 411 aa12.2□□□□□ -0.46
HDAC6-214ENST00000465269 ZCCHC18P0CG32 403 aa12.2□□□□□ -0.46
HDAC6-214ENST00000465269 FUT1P19526 365 aa12.2□□□□□ -0.46
HDAC6-214ENST00000465269 NFYCQ13952 458 aa12.2□□□□□ -0.46
HDAC6-214ENST00000465269 LAPTM4AQ15012 233 aa12.2□□□□□ -0.46
HDAC6-214ENST00000465269 DMRTC1Q5HYR2 192 aa12.2□□□□□ -0.46
HDAC6-214ENST00000465269 TTC33Q6PID6 262 aaPredicted RBP12.2□□□□□ -0.46
HDAC6-214ENST00000465269 DLEU7Q6UYE1 221 aa12.2□□□□□ -0.46
HDAC6-214ENST00000465269 IGFN1Q86VF2 1251 aa12.2□□□□□ -0.46
HDAC6-214ENST00000465269 NDUFA11Q86Y39 141 aa12.2□□□□□ -0.46
HDAC6-214ENST00000465269 SLC30A8Q8IWU4 369 aa12.2□□□□□ -0.46
HDAC6-214ENST00000465269 OR5R1Q8NH85 324 aa12.2□□□□□ -0.46
HDAC6-214ENST00000465269 RCN3Q96D15 328 aa12.2□□□□□ -0.46
HDAC6-214ENST00000465269 ZNF582Q96NG8 517 aaPredicted RBP12.2□□□□□ -0.46
HDAC6-214ENST00000465269 RAD21L1Q9H4I0 556 aa12.2□□□□□ -0.46
HDAC6-214ENST00000465269 SERTAD4Q9NUC0 356 aa12.2□□□□□ -0.46
HDAC6-214ENST00000465269 ARL8BQ9NVJ2 186 aa12.2□□□□□ -0.46
HDAC6-214ENST00000465269 SLC25A37Q9NYZ2 338 aa12.2□□□□□ -0.46
HDAC6-214ENST00000465269 VAPAQ9P0L0 249 aa12.2□□□□□ -0.46
HDAC6-214ENST00000465269 SLC7A7Q9UM01 511 aa12.2□□□□□ -0.46
HDAC6-214ENST00000465269 IGHV3OR15-7A0A075B7D8 119 aa12.19□□□□□ -0.46
HDAC6-214ENST00000465269 CLIC1O00299 241 aa12.19□□□□□ -0.46
HDAC6-214ENST00000465269 MRASO14807 208 aa12.19□□□□□ -0.46
HDAC6-214ENST00000465269 BMP2P12643 396 aa12.19□□□□□ -0.46
HDAC6-214ENST00000465269 FPR3P25089 353 aa12.19□□□□□ -0.46
HDAC6-214ENST00000465269 DAP3P51398 398 aaKnown RBP12.19□□□□□ -0.46
HDAC6-214ENST00000465269 PCBD1P61457 104 aa12.19□□□□□ -0.46
HDAC6-214ENST00000465269 CDK6Q00534 326 aa12.19□□□□□ -0.46
HDAC6-214ENST00000465269 OR8B8Q15620 311 aa12.19□□□□□ -0.46
HDAC6-214ENST00000465269 ENTPD8Q5MY95 495 aa12.19□□□□□ -0.46
HDAC6-214ENST00000465269 LRIF1Q5T3J3 769 aa12.19□□□□□ -0.46
HDAC6-214ENST00000465269 CASC10Q5T4H9 136 aa12.19□□□□□ -0.46
HDAC6-214ENST00000465269 MSRB3Q8IXL7 192 aa12.19□□□□□ -0.46
HDAC6-214ENST00000465269 DPP10Q8N608 796 aa12.19□□□□□ -0.46
HDAC6-214ENST00000465269 OR6T1Q8NGN1 323 aa12.19□□□□□ -0.46
HDAC6-214ENST00000465269 PFN4Q8NHR9 129 aa12.19□□□□□ -0.46
HDAC6-214ENST00000465269 CMTM5Q96DZ9 223 aa12.19□□□□□ -0.46
HDAC6-214ENST00000465269 SSX3Q99909 188 aa12.19□□□□□ -0.46
HDAC6-214ENST00000465269 ECSITQ9BQ95 431 aa12.19□□□□□ -0.46
HDAC6-214ENST00000465269 SMURF2Q9HAU4 748 aa12.19□□□□□ -0.46
HDAC6-214ENST00000465269 THUMPD1Q9NXG2 353 aaKnown RBP12.19□□□□□ -0.46
HDAC6-214ENST00000465269 RPUSD1Q9UJJ7 312 aaKnown RBP12.19□□□□□ -0.46
HDAC6-214ENST00000465269 SLC13A4Q9UKG4 626 aa12.19□□□□□ -0.46
HDAC6-214ENST00000465269 CAB39Q9Y376 341 aaPredicted RBP12.19□□□□□ -0.46
HDAC6-214ENST00000465269 A0A1B0GVI7 797 aa12.18□□□□□ -0.46
HDAC6-214ENST00000465269 BBIP1A8MTZ0 92 aa12.18□□□□□ -0.46
HDAC6-214ENST00000465269 CENPBD1B2RD01 187 aa12.18□□□□□ -0.46
HDAC6-214ENST00000465269 H7C1C5 153 aa12.18□□□□□ -0.46
HDAC6-214ENST00000465269 LGALS8O00214 317 aa12.18□□□□□ -0.46
HDAC6-214ENST00000465269 HOXB9P17482 250 aaPredicted RBP12.18□□□□□ -0.46
HDAC6-214ENST00000465269 PRDX6P30041 224 aa12.18□□□□□ -0.46
HDAC6-214ENST00000465269 RAD23AP54725 363 aa12.18□□□□□ -0.46
HDAC6-214ENST00000465269 LCN6P62502 163 aa12.18□□□□□ -0.46
HDAC6-214ENST00000465269 GCNT6Q5T4J0 391 aa12.18□□□□□ -0.46
HDAC6-214ENST00000465269 REEP3Q6NUK4 255 aa12.18□□□□□ -0.46
HDAC6-214ENST00000465269 ZNF613Q6PF04 617 aa12.18□□□□□ -0.46
HDAC6-214ENST00000465269 C11orf88Q6PI97 169 aa12.18□□□□□ -0.46
HDAC6-214ENST00000465269 CRIP3Q6Q6R5 217 aa12.18□□□□□ -0.46
HDAC6-214ENST00000465269 RNF144BQ7Z419 303 aa12.18□□□□□ -0.46
HDAC6-214ENST00000465269 DHDDSQ86SQ9 333 aa12.18□□□□□ -0.46
HDAC6-214ENST00000465269 KRT73Q86Y46 540 aa12.18□□□□□ -0.46
HDAC6-214ENST00000465269 Q8N7P7 452 aa12.18□□□□□ -0.46
HDAC6-214ENST00000465269 SPERTQ8NA61 448 aa12.18□□□□□ -0.46
HDAC6-214ENST00000465269 PCYOX1LQ8NBM8 494 aa12.18□□□□□ -0.46
HDAC6-214ENST00000465269 OR11L1Q8NGX0 322 aa12.18□□□□□ -0.46
HDAC6-214ENST00000465269 Q8TCH9 128 aa12.18□□□□□ -0.46
HDAC6-214ENST00000465269 ADAMTS16Q8TE57 1224 aa12.18□□□□□ -0.46
HDAC6-214ENST00000465269 CGREF1Q99674 301 aa12.18□□□□□ -0.46
HDAC6-214ENST00000465269 PCDHAC1Q9H158 963 aa12.18□□□□□ -0.46
HDAC6-214ENST00000465269 ZNF702PQ9H963 129 aa12.18□□□□□ -0.46
HDAC6-214ENST00000465269 EFCAB1Q9HAE3 211 aa12.18□□□□□ -0.46
HDAC6-214ENST00000465269 C20orf141Q9NUB4 165 aa12.18□□□□□ -0.46
HDAC6-214ENST00000465269 MAB21L2Q9Y586 359 aa12.18□□□□□ -0.46
HDAC6-214ENST00000465269 KPTNQ9Y664 436 aa12.18□□□□□ -0.46
HDAC6-214ENST00000465269 STARD9Q9P2P6 4700 aa12.18□□□□□ -0.46
HDAC6-214ENST00000465269 C12orf71A8MTZ7 269 aa12.17□□□□□ -0.46
HDAC6-214ENST00000465269 SGCEO43556 437 aa12.17□□□□□ -0.46
HDAC6-214ENST00000465269 MSR1P21757 451 aa12.17□□□□□ -0.46
HDAC6-214ENST00000465269 EEF1B2P24534 225 aaKnown RBP12.17□□□□□ -0.46
HDAC6-214ENST00000465269 GATA4P43694 442 aa12.17□□□□□ -0.46
HDAC6-214ENST00000465269 FBXW12Q6X9E4 464 aa12.17□□□□□ -0.46
HDAC6-214ENST00000465269 FOXL2NBQ6ZUU3 175 aa12.17□□□□□ -0.46
HDAC6-214ENST00000465269 TRPM8Q7Z2W7 1104 aa12.17□□□□□ -0.46
HDAC6-214ENST00000465269 FAM90A1Q86YD7 464 aa12.17□□□□□ -0.46
HDAC6-214ENST00000465269 ARMC8Q8IUR7 673 aa12.17□□□□□ -0.46
HDAC6-214ENST00000465269 GPR32P1Q8NGA4 272 aa12.17□□□□□ -0.46
HDAC6-214ENST00000465269 NSL1Q96IY1 281 aa12.17□□□□□ -0.46
HDAC6-214ENST00000465269 PRSS27Q9BQR3 290 aa12.17□□□□□ -0.46
HDAC6-214ENST00000465269 SPATA5L1Q9BVQ7 753 aa12.17□□□□□ -0.46
HDAC6-214ENST00000465269 FN3KRPQ9HA64 309 aa12.17□□□□□ -0.46
HDAC6-214ENST00000465269 POLE4Q9NR33 117 aa12.17□□□□□ -0.46
HDAC6-214ENST00000465269 TMEM100Q9NV29 134 aa12.17□□□□□ -0.46
HDAC6-214ENST00000465269 GID8Q9NWU2 228 aa12.17□□□□□ -0.46
HDAC6-214ENST00000465269 RNF7Q9UBF6 113 aa12.17□□□□□ -0.46
HDAC6-214ENST00000465269 TAGLN3Q9UI15 199 aa12.17□□□□□ -0.46
HDAC6-214ENST00000465269 TRBV5-3A0A0A0MS03 114 aa12.16□□□□□ -0.46
HDAC6-214ENST00000465269 COX5BP10606 129 aa12.16□□□□□ -0.46
HDAC6-214ENST00000465269 ZNF26P17031 533 aaPredicted RBP12.16□□□□□ -0.46
HDAC6-214ENST00000465269 NUDT2P50583 147 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms