RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 TMEM150BA6NC51 233 aa2.43□□□□□ -2.02
CLK1-208ENST00000464454 H7C1H1 209 aa2.43□□□□□ -2.02
CLK1-208ENST00000464454 DNASE2O00115 360 aaPredicted RBP2.43□□□□□ -2.02
CLK1-208ENST00000464454 NME4O00746 187 aa2.43□□□□□ -2.02
CLK1-208ENST00000464454 NVLO15381 856 aaKnown RBP2.43□□□□□ -2.02
CLK1-208ENST00000464454 REM1O75628 298 aa2.43□□□□□ -2.02
CLK1-208ENST00000464454 HLA-DQA1P01909 254 aa2.43□□□□□ -2.02
CLK1-208ENST00000464454 RALBP11234 206 aa2.43□□□□□ -2.02
CLK1-208ENST00000464454 MUC1P15941 1255 aaPredicted RBP2.43□□□□□ -2.02
CLK1-208ENST00000464454 USF1P22415 310 aaPredicted RBP2.43□□□□□ -2.02
CLK1-208ENST00000464454 NBL1P41271 181 aa2.43□□□□□ -2.02
CLK1-208ENST00000464454 IRF8Q02556 426 aa2.43□□□□□ -2.02
CLK1-208ENST00000464454 KRTAP5-5Q701N2 237 aaPredicted RBP2.43□□□□□ -2.02
CLK1-208ENST00000464454 HORMAD1Q86X24 394 aa2.43□□□□□ -2.02
CLK1-208ENST00000464454 CDKL3Q8IVW4 592 aaPredicted RBP2.43□□□□□ -2.02
CLK1-208ENST00000464454 OR4K5Q8NGD3 323 aa2.43□□□□□ -2.02
CLK1-208ENST00000464454 BTN2A3PQ96KV6 586 aa2.43□□□□□ -2.02
CLK1-208ENST00000464454 RNF145Q96MT1 663 aa2.43□□□□□ -2.02
CLK1-208ENST00000464454 TMEM27Q9HBJ8 222 aa2.43□□□□□ -2.02
CLK1-208ENST00000464454 MYOZ1Q9NP98 299 aaPredicted RBP2.43□□□□□ -2.02
CLK1-208ENST00000464454 ZC4H2Q9NQZ6 224 aa2.43□□□□□ -2.02
CLK1-208ENST00000464454 AHSPQ9NZD4 102 aa2.43□□□□□ -2.02
CLK1-208ENST00000464454 RFNGQ9Y644 331 aa2.43□□□□□ -2.02
CLK1-208ENST00000464454 PCM1Q15154 2024 aa2.42□□□□□ -2.02
CLK1-208ENST00000464454 LRCOL1A6NCL2 159 aa2.42□□□□□ -2.02
CLK1-208ENST00000464454 PDZK1P1A8MUH7 402 aa2.42□□□□□ -2.02
CLK1-208ENST00000464454 XRCC2O43543 280 aa2.42□□□□□ -2.02
CLK1-208ENST00000464454 FOXH1O75593 365 aa2.42□□□□□ -2.02
CLK1-208ENST00000464454 SLC22A5O76082 557 aa2.42□□□□□ -2.02
CLK1-208ENST00000464454 KRT16P08779 473 aa2.42□□□□□ -2.02
CLK1-208ENST00000464454 NPY1RP25929 384 aa2.42□□□□□ -2.02
CLK1-208ENST00000464454 CCT6AP40227 531 aaKnown RBP2.42□□□□□ -2.02
CLK1-208ENST00000464454 RAB7AP51149 207 aa2.42□□□□□ -2.02
CLK1-208ENST00000464454 RPS15AP62244 130 aaKnown RBP2.42□□□□□ -2.02
CLK1-208ENST00000464454 SPAG1Q07617 926 aa2.42□□□□□ -2.02
CLK1-208ENST00000464454 DNAJC3Q13217 504 aa2.42□□□□□ -2.02
CLK1-208ENST00000464454 MPV17L2Q567V2 206 aa2.42□□□□□ -2.02
CLK1-208ENST00000464454 PIP5KL1Q5T9C9 394 aa2.42□□□□□ -2.02
CLK1-208ENST00000464454 ADNP2Q6IQ32 1131 aa2.42□□□□□ -2.02
CLK1-208ENST00000464454 NKAIN4Q8IVV8 208 aa2.42□□□□□ -2.02
CLK1-208ENST00000464454 VKORC1L1Q8N0U8 176 aa2.42□□□□□ -2.02
CLK1-208ENST00000464454 OR10G6Q8NH81 332 aa2.42□□□□□ -2.02
CLK1-208ENST00000464454 GPX8Q8TED1 209 aa2.42□□□□□ -2.02
CLK1-208ENST00000464454 RPEQ96AT9 228 aa2.42□□□□□ -2.02
CLK1-208ENST00000464454 RBMXL1Q96E39 390 aaKnown RBP2.42□□□□□ -2.02
CLK1-208ENST00000464454 RNF157Q96PX1 679 aa2.42□□□□□ -2.02
CLK1-208ENST00000464454 GPR21Q99679 349 aa2.42□□□□□ -2.02
CLK1-208ENST00000464454 SLIRPQ9GZT3 109 aaKnown RBP2.42□□□□□ -2.02
CLK1-208ENST00000464454 OR52D1Q9H346 318 aa2.42□□□□□ -2.02
CLK1-208ENST00000464454 CHRAC1Q9NRG0 131 aa2.42□□□□□ -2.02
CLK1-208ENST00000464454 ZNF282Q9UDV7 671 aaPredicted RBP2.42□□□□□ -2.02
CLK1-208ENST00000464454 OPN4Q9UHM6 478 aa2.42□□□□□ -2.02
CLK1-208ENST00000464454 YARS2Q9Y2Z4 477 aaKnown RBP2.42□□□□□ -2.02
CLK1-208ENST00000464454 TSSC4Q9Y5U2 329 aaPredicted RBP2.42□□□□□ -2.02
CLK1-208ENST00000464454 IGHV3OR16-9A0A0B4J2B5 98 aa2.41□□□□□ -2.02
CLK1-208ENST00000464454 IGKV1-8A0A0C4DH67 115 aa2.41□□□□□ -2.02
CLK1-208ENST00000464454 SOCS1O15524 211 aa2.41□□□□□ -2.02
CLK1-208ENST00000464454 AKR7A2O43488 359 aa2.41□□□□□ -2.02
CLK1-208ENST00000464454 ZNF207O43670 478 aaKnown RBP2.41□□□□□ -2.02
CLK1-208ENST00000464454 OR8U9P0C7N5 309 aa2.41□□□□□ -2.02
CLK1-208ENST00000464454 ZNF688P0C7X2 276 aa2.41□□□□□ -2.02
CLK1-208ENST00000464454 LINC00869P0C866 280 aa2.41□□□□□ -2.02
CLK1-208ENST00000464454 C1GALT1C1LP0DN25 315 aa2.41□□□□□ -2.02
CLK1-208ENST00000464454 RAB5AP20339 215 aa2.41□□□□□ -2.02
CLK1-208ENST00000464454 MYL9P24844 172 aa2.41□□□□□ -2.02
CLK1-208ENST00000464454 PFN2P35080 140 aa2.41□□□□□ -2.02
CLK1-208ENST00000464454 TALDO1P37837 337 aa2.41□□□□□ -2.02
CLK1-208ENST00000464454 OPRK1P41145 380 aa2.41□□□□□ -2.02
CLK1-208ENST00000464454 GPR1P46091 355 aa2.41□□□□□ -2.02
CLK1-208ENST00000464454 SERPINB8P50452 374 aa2.41□□□□□ -2.02
CLK1-208ENST00000464454 FABP6P51161 128 aa2.41□□□□□ -2.02
CLK1-208ENST00000464454 CLDN8P56748 225 aa2.41□□□□□ -2.02
CLK1-208ENST00000464454 RPL23P62829 140 aaKnown RBP2.41□□□□□ -2.02
CLK1-208ENST00000464454 ABCA11PQ4W5N1 156 aa2.41□□□□□ -2.02
CLK1-208ENST00000464454 GCSAMLQ5JQS6 135 aa2.41□□□□□ -2.02
CLK1-208ENST00000464454 RWDD4Q6NW29 188 aaKnown RBP2.41□□□□□ -2.02
CLK1-208ENST00000464454 WDR82Q6UXN9 313 aa2.41□□□□□ -2.02
CLK1-208ENST00000464454 SLC16A13Q7RTY0 426 aa2.41□□□□□ -2.02
CLK1-208ENST00000464454 WDFY1Q8IWB7 410 aa2.41□□□□□ -2.02
CLK1-208ENST00000464454 MYOCDQ8IZQ8 938 aa2.41□□□□□ -2.02
CLK1-208ENST00000464454 LGI3Q8N145 548 aa2.41□□□□□ -2.02
CLK1-208ENST00000464454 CSGALNACT2Q8N6G5 542 aa2.41□□□□□ -2.02
CLK1-208ENST00000464454 INO80EQ8NBZ0 244 aaPredicted RBP2.41□□□□□ -2.02
CLK1-208ENST00000464454 OR51F2Q8NH61 342 aa2.41□□□□□ -2.02
CLK1-208ENST00000464454 LILRB4Q8NHJ6 448 aa2.41□□□□□ -2.02
CLK1-208ENST00000464454 ITFG1Q8TB96 612 aa2.41□□□□□ -2.02
CLK1-208ENST00000464454 CA5BP1Q8WTZ4 195 aa2.41□□□□□ -2.02
CLK1-208ENST00000464454 RAB1CQ92928 201 aa2.41□□□□□ -2.02
CLK1-208ENST00000464454 HAUS1Q96CS2 278 aa2.41□□□□□ -2.02
CLK1-208ENST00000464454 DYNLL2Q96FJ2 89 aa2.41□□□□□ -2.02
CLK1-208ENST00000464454 ZNF488Q96MN9 340 aa2.41□□□□□ -2.02
CLK1-208ENST00000464454 LCE3DQ9BYE3 92 aa2.41□□□□□ -2.02
CLK1-208ENST00000464454 WFDC1Q9HC57 220 aa2.41□□□□□ -2.02
CLK1-208ENST00000464454 SLC17A7Q9P2U7 560 aa2.41□□□□□ -2.02
CLK1-208ENST00000464454 PLA2R1Q13018 1463 aa2.4□□□□□ -2.02
CLK1-208ENST00000464454 TRAV6A0A075B6T7 132 aa2.4□□□□□ -2.03
CLK1-208ENST00000464454 IGHV1-69DA0A0B4J2H0 117 aa2.4□□□□□ -2.03
CLK1-208ENST00000464454 GABRPO00591 440 aa2.4□□□□□ -2.03
CLK1-208ENST00000464454 PLPP1O14494 284 aa2.4□□□□□ -2.03
CLK1-208ENST00000464454 ERI3O43414 337 aaKnown RBP2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms