RNA–Protein interactions for RNA: ENST00000464263.1

RAB11FIP3-208, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 329 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-208ENST00000464263 ADGRL4Q9HBW9 690 aa13.13□□□□□ -0.31
RAB11FIP3-208ENST00000464263 MYOZ1Q9NP98 299 aaPredicted RBP13.13□□□□□ -0.31
RAB11FIP3-208ENST00000464263 CYSLTR2Q9NS75 346 aa13.13□□□□□ -0.31
RAB11FIP3-208ENST00000464263 IMPAD1Q9NX62 359 aa13.13□□□□□ -0.31
RAB11FIP3-208ENST00000464263 CGGBP1Q9UFW8 167 aaPredicted RBP13.13□□□□□ -0.31
RAB11FIP3-208ENST00000464263 WARS2Q9UGM6 360 aaKnown RBP13.13□□□□□ -0.31
RAB11FIP3-208ENST00000464263 LAMP5Q9UJQ1 280 aa13.13□□□□□ -0.31
RAB11FIP3-208ENST00000464263 LOC100130705A0A1B0GUX0 176 aa13.12□□□□□ -0.31
RAB11FIP3-208ENST00000464263 LOC390937A0A1W2PQ73 354 aa13.12□□□□□ -0.31
RAB11FIP3-208ENST00000464263 ZSCAN5BA6NJL1 495 aa13.12□□□□□ -0.31
RAB11FIP3-208ENST00000464263 SLC16A6O15403 523 aa13.12□□□□□ -0.31
RAB11FIP3-208ENST00000464263 TIMM8AO60220 97 aaPredicted RBP13.12□□□□□ -0.31
RAB11FIP3-208ENST00000464263 NCR1O76036 304 aa13.12□□□□□ -0.31
RAB11FIP3-208ENST00000464263 IGHV1-46P01743 117 aa13.12□□□□□ -0.31
RAB11FIP3-208ENST00000464263 MT-ND5P03915 603 aa13.12□□□□□ -0.31
RAB11FIP3-208ENST00000464263 CSF3P09919 207 aa13.12□□□□□ -0.31
RAB11FIP3-208ENST00000464263 H2BFMP0C1H6 154 aa13.12□□□□□ -0.31
RAB11FIP3-208ENST00000464263 SLC6A9P48067 706 aa13.12□□□□□ -0.31
RAB11FIP3-208ENST00000464263 PDLIM4P50479 330 aa13.12□□□□□ -0.31
RAB11FIP3-208ENST00000464263 CDK5R2Q13319 367 aa13.12□□□□□ -0.31
RAB11FIP3-208ENST00000464263 TMED1Q13445 227 aa13.12□□□□□ -0.31
RAB11FIP3-208ENST00000464263 GK2Q14410 553 aaPredicted RBP13.12□□□□□ -0.31
RAB11FIP3-208ENST00000464263 OCLNQ16625 522 aa13.12□□□□□ -0.31
RAB11FIP3-208ENST00000464263 LRRC36Q1X8D7 754 aa13.12□□□□□ -0.31
RAB11FIP3-208ENST00000464263 OR2T2Q6IF00 324 aa13.12□□□□□ -0.31
RAB11FIP3-208ENST00000464263 Q6ZR03 302 aa13.12□□□□□ -0.31
RAB11FIP3-208ENST00000464263 ZNF786Q8N393 782 aa13.12□□□□□ -0.31
RAB11FIP3-208ENST00000464263 GALNT4Q8N4A0 578 aa13.12□□□□□ -0.31
RAB11FIP3-208ENST00000464263 ZNF283Q8N7M2 679 aa13.12□□□□□ -0.31
RAB11FIP3-208ENST00000464263 C18orf12Q96KH6 178 aa13.12□□□□□ -0.31
RAB11FIP3-208ENST00000464263 RDH12Q96NR8 316 aa13.12□□□□□ -0.31
RAB11FIP3-208ENST00000464263 CNN2Q99439 309 aaKnown RBP13.12□□□□□ -0.31
RAB11FIP3-208ENST00000464263 REG4Q9BYZ8 158 aa13.12□□□□□ -0.31
RAB11FIP3-208ENST00000464263 DCLRE1BQ9H816 532 aa13.12□□□□□ -0.31
RAB11FIP3-208ENST00000464263 C8orf4Q9NR00 106 aa13.12□□□□□ -0.31
RAB11FIP3-208ENST00000464263 DNAJC27Q9NZQ0 273 aa13.12□□□□□ -0.31
RAB11FIP3-208ENST00000464263 NKX1-2Q9UD57 310 aaPredicted RBP13.12□□□□□ -0.31
RAB11FIP3-208ENST00000464263 COPS3Q9UNS2 423 aa13.12□□□□□ -0.31
RAB11FIP3-208ENST00000464263 GMPPBQ9Y5P6 360 aa13.12□□□□□ -0.31
RAB11FIP3-208ENST00000464263 PLSCR5A0PG75 271 aa13.11□□□□□ -0.31
RAB11FIP3-208ENST00000464263 PRR32B1ATL7 298 aa13.11□□□□□ -0.31
RAB11FIP3-208ENST00000464263 VWC2LB2RUY7 222 aa13.11□□□□□ -0.31
RAB11FIP3-208ENST00000464263 RNF223E7ERA6 249 aa13.11□□□□□ -0.31
RAB11FIP3-208ENST00000464263 LYNX1G3V0Z9 82 aa13.11□□□□□ -0.31
RAB11FIP3-208ENST00000464263 CASQ2O14958 399 aaPredicted RBP13.11□□□□□ -0.31
RAB11FIP3-208ENST00000464263 SPRY3O43610 288 aa13.11□□□□□ -0.31
RAB11FIP3-208ENST00000464263 APOC1P02654 83 aa13.11□□□□□ -0.31
RAB11FIP3-208ENST00000464263 SBK2P0C263 348 aa13.11□□□□□ -0.31
RAB11FIP3-208ENST00000464263 LYNX1P0DP58 116 aa13.11□□□□□ -0.31
RAB11FIP3-208ENST00000464263 SLC2A1P11166 492 aa13.11□□□□□ -0.31
RAB11FIP3-208ENST00000464263 GABRB1P18505 474 aa13.11□□□□□ -0.31
RAB11FIP3-208ENST00000464263 COL8A2P25067 703 aa13.11□□□□□ -0.31
RAB11FIP3-208ENST00000464263 PEX2P28328 305 aa13.11□□□□□ -0.31
RAB11FIP3-208ENST00000464263 HSD11B1P28845 292 aa13.11□□□□□ -0.31
RAB11FIP3-208ENST00000464263 CX3CR1P49238 355 aa13.11□□□□□ -0.31
RAB11FIP3-208ENST00000464263 CCL8P80075 99 aa13.11□□□□□ -0.31
RAB11FIP3-208ENST00000464263 ROM1Q03395 351 aa13.11□□□□□ -0.31
RAB11FIP3-208ENST00000464263 ZNF92Q03936 586 aa13.11□□□□□ -0.31
RAB11FIP3-208ENST00000464263 MALLQ13021 153 aa13.11□□□□□ -0.31
RAB11FIP3-208ENST00000464263 PCGF3Q3KNV8 242 aa13.11□□□□□ -0.31
RAB11FIP3-208ENST00000464263 OGFRL1Q5TC84 451 aaPredicted RBP13.11□□□□□ -0.31
RAB11FIP3-208ENST00000464263 DEGS2Q6QHC5 323 aa13.11□□□□□ -0.31
RAB11FIP3-208ENST00000464263 LRRN1Q6UXK5 716 aa13.11□□□□□ -0.31
RAB11FIP3-208ENST00000464263 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.11□□□□□ -0.31
RAB11FIP3-208ENST00000464263 PACRGLQ8N7B6 248 aa13.11□□□□□ -0.31
RAB11FIP3-208ENST00000464263 RHOXF1Q8NHV9 184 aa13.11□□□□□ -0.31
RAB11FIP3-208ENST00000464263 COX4I2Q96KJ9 171 aa13.11□□□□□ -0.31
RAB11FIP3-208ENST00000464263 MNTQ99583 582 aa13.11□□□□□ -0.31
RAB11FIP3-208ENST00000464263 REPIN1Q9BWE0 567 aaKnown RBP13.11□□□□□ -0.31
RAB11FIP3-208ENST00000464263 MSL2Q9HCI7 577 aa13.11□□□□□ -0.31
RAB11FIP3-208ENST00000464263 SMPD3Q9NY59 655 aaPredicted RBP13.11□□□□□ -0.31
RAB11FIP3-208ENST00000464263 ZNF319Q9P2F9 582 aa13.11□□□□□ -0.31
RAB11FIP3-208ENST00000464263 ZDHHC8Q9ULC8 765 aa13.11□□□□□ -0.31
RAB11FIP3-208ENST00000464263 TMEM14AQ9Y6G1 99 aa13.11□□□□□ -0.31
RAB11FIP3-208ENST00000464263 FLNAP21333 2647 aaKnown RBP13.11□□□□□ -0.31
RAB11FIP3-208ENST00000464263 ACANP16112 2415 aa13.1□□□□□ -0.31
RAB11FIP3-208ENST00000464263 A0A096LNT2 108 aa13.1□□□□□ -0.31
RAB11FIP3-208ENST00000464263 IQCF6A8MYZ5 107 aa13.1□□□□□ -0.31
RAB11FIP3-208ENST00000464263 NDUFS8O00217 210 aa13.1□□□□□ -0.31
RAB11FIP3-208ENST00000464263 ENTPD6O75354 484 aa13.1□□□□□ -0.31
RAB11FIP3-208ENST00000464263 GIFP27352 417 aa13.1□□□□□ -0.31
RAB11FIP3-208ENST00000464263 ZNF121P58317 390 aaPredicted RBP13.1□□□□□ -0.31
RAB11FIP3-208ENST00000464263 MRPS11P82912 194 aaKnown RBP13.1□□□□□ -0.31
RAB11FIP3-208ENST00000464263 TSTQ16762 297 aaKnown RBP13.1□□□□□ -0.31
RAB11FIP3-208ENST00000464263 FAM209AQ5JX71 171 aa13.1□□□□□ -0.31
RAB11FIP3-208ENST00000464263 GLYATL3Q5SZD4 288 aa13.1□□□□□ -0.31
RAB11FIP3-208ENST00000464263 MEDAGQ5VYS4 303 aa13.1□□□□□ -0.31
RAB11FIP3-208ENST00000464263 KCTD18Q6PI47 426 aaPredicted RBP13.1□□□□□ -0.31
RAB11FIP3-208ENST00000464263 USP51Q70EK9 711 aa13.1□□□□□ -0.31
RAB11FIP3-208ENST00000464263 KRT77Q7Z794 578 aa13.1□□□□□ -0.31
RAB11FIP3-208ENST00000464263 SLC35F2Q8IXU6 374 aa13.1□□□□□ -0.31
RAB11FIP3-208ENST00000464263 ENTHD1Q8IYW4 607 aa13.1□□□□□ -0.31
RAB11FIP3-208ENST00000464263 OR5AS1Q8N127 324 aa13.1□□□□□ -0.31
RAB11FIP3-208ENST00000464263 RFLNBQ8N5W9 214 aa13.1□□□□□ -0.31
RAB11FIP3-208ENST00000464263 OR8G5Q8NG78 346 aa13.1□□□□□ -0.31
RAB11FIP3-208ENST00000464263 OR51G2Q8NGK0 314 aa13.1□□□□□ -0.31
RAB11FIP3-208ENST00000464263 ASB17Q8WXJ9 295 aa13.1□□□□□ -0.31
RAB11FIP3-208ENST00000464263 RDH5Q92781 318 aa13.1□□□□□ -0.31
RAB11FIP3-208ENST00000464263 RFKQ969G6 155 aa13.1□□□□□ -0.31
RAB11FIP3-208ENST00000464263 YIPF5Q969M3 257 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms