RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 PGLYRP3Q96LB9 341 aa12.42□□□□□ -0.42
COL6A1-202ENST00000463060 VCX3AQ9NNX9 186 aa12.42□□□□□ -0.42
COL6A1-202ENST00000463060 NUFIP1Q9UHK0 495 aaKnown RBP12.42□□□□□ -0.42
COL6A1-202ENST00000463060 SLC22A13Q9Y226 551 aa12.42□□□□□ -0.42
COL6A1-202ENST00000463060 FLNBO75369 2602 aaKnown RBP12.41□□□□□ -0.42
COL6A1-202ENST00000463060 C5orf49A4QMS7 147 aa12.41□□□□□ -0.42
COL6A1-202ENST00000463060 ZFPL1O95159 310 aa12.41□□□□□ -0.42
COL6A1-202ENST00000463060 SLC2A1P11166 492 aa12.41□□□□□ -0.42
COL6A1-202ENST00000463060 CD53P19397 219 aa12.41□□□□□ -0.42
COL6A1-202ENST00000463060 CELP19835 753 aa12.41□□□□□ -0.42
COL6A1-202ENST00000463060 PSMB9P28065 219 aa12.41□□□□□ -0.42
COL6A1-202ENST00000463060 APLNRP35414 380 aa12.41□□□□□ -0.42
COL6A1-202ENST00000463060 TGFBR2P37173 567 aa12.41□□□□□ -0.42
COL6A1-202ENST00000463060 WNT5AP41221 380 aa12.41□□□□□ -0.42
COL6A1-202ENST00000463060 RGS6P49758 472 aa12.41□□□□□ -0.42
COL6A1-202ENST00000463060 GDI2P50395 445 aaKnown RBP12.41□□□□□ -0.42
COL6A1-202ENST00000463060 ZNF83P51522 516 aa12.41□□□□□ -0.42
COL6A1-202ENST00000463060 ZFP41Q8N8Y5 198 aa12.41□□□□□ -0.42
COL6A1-202ENST00000463060 OR1J2Q8NGS2 313 aa12.41□□□□□ -0.42
COL6A1-202ENST00000463060 LINC01560Q8TB33 94 aa12.41□□□□□ -0.42
COL6A1-202ENST00000463060 SMIM19Q96E16 107 aa12.41□□□□□ -0.42
COL6A1-202ENST00000463060 YIPF6Q96EC8 236 aa12.41□□□□□ -0.42
COL6A1-202ENST00000463060 PBOV1Q9GZY1 135 aa12.41□□□□□ -0.42
COL6A1-202ENST00000463060 NDRG3Q9UGV2 375 aa12.41□□□□□ -0.42
COL6A1-202ENST00000463060 OR52A1Q9UKL2 312 aa12.41□□□□□ -0.42
COL6A1-202ENST00000463060 IGHV2OR16-5A0A0B4J2B6 119 aa12.4□□□□□ -0.42
COL6A1-202ENST00000463060 TRBV2A0A0J9YWF9 115 aa12.4□□□□□ -0.42
COL6A1-202ENST00000463060 A0A1B0GTI1 187 aa12.4□□□□□ -0.42
COL6A1-202ENST00000463060 DPRXA6NFQ7 191 aa12.4□□□□□ -0.42
COL6A1-202ENST00000463060 LOC110117498-PIK3R3F6TDL0 507 aa12.4□□□□□ -0.42
COL6A1-202ENST00000463060 C19orf84I3L1E1 186 aa12.4□□□□□ -0.42
COL6A1-202ENST00000463060 J3QKU1 62 aa12.4□□□□□ -0.42
COL6A1-202ENST00000463060 TTRP02766 147 aa12.4□□□□□ -0.42
COL6A1-202ENST00000463060 ISG15P05161 165 aa12.4□□□□□ -0.42
COL6A1-202ENST00000463060 HSMCR30P0CW71 290 aa12.4□□□□□ -0.42
COL6A1-202ENST00000463060 PCSK6P29122 969 aa12.4□□□□□ -0.42
COL6A1-202ENST00000463060 CALCRP30988 508 aa12.4□□□□□ -0.42
COL6A1-202ENST00000463060 RPS11P62280 158 aaKnown RBP eCLIP12.4□□□□□ -0.42
COL6A1-202ENST00000463060 NAAAQ02083 359 aa12.4□□□□□ -0.42
COL6A1-202ENST00000463060 SNTB1Q13884 538 aaKnown RBP12.4□□□□□ -0.42
COL6A1-202ENST00000463060 TSTQ16762 297 aaKnown RBP12.4□□□□□ -0.42
COL6A1-202ENST00000463060 TBC1D28Q2M2D7 210 aa12.4□□□□□ -0.42
COL6A1-202ENST00000463060 SNAI3Q3KNW1 292 aa12.4□□□□□ -0.42
COL6A1-202ENST00000463060 LIPKQ5VXJ0 399 aa12.4□□□□□ -0.42
COL6A1-202ENST00000463060 Q6ZSR3 168 aa12.4□□□□□ -0.42
COL6A1-202ENST00000463060 ZNF101Q8IZC7 436 aa12.4□□□□□ -0.42
COL6A1-202ENST00000463060 OR8B12Q8NGG6 310 aa12.4□□□□□ -0.42
COL6A1-202ENST00000463060 RGP1Q92546 391 aaPredicted RBP12.4□□□□□ -0.42
COL6A1-202ENST00000463060 GHSRQ92847 366 aa12.4□□□□□ -0.42
COL6A1-202ENST00000463060 DACH2Q96NX9 599 aa12.4□□□□□ -0.42
COL6A1-202ENST00000463060 MED18Q9BUE0 208 aa12.4□□□□□ -0.42
COL6A1-202ENST00000463060 MOB1AQ9H8S9 216 aa12.4□□□□□ -0.42
COL6A1-202ENST00000463060 TBCCD1Q9NVR7 557 aa12.4□□□□□ -0.42
COL6A1-202ENST00000463060 STARD10Q9Y365 291 aa12.4□□□□□ -0.42
COL6A1-202ENST00000463060 A0A0U1RQV5 110 aa12.39□□□□□ -0.43
COL6A1-202ENST00000463060 J3QW42 95 aa12.39□□□□□ -0.43
COL6A1-202ENST00000463060 CCRL2O00421 344 aa12.39□□□□□ -0.43
COL6A1-202ENST00000463060 GPRIN2O60269 458 aa12.39□□□□□ -0.43
COL6A1-202ENST00000463060 NGFP01138 241 aa12.39□□□□□ -0.43
COL6A1-202ENST00000463060 PTAFRP25105 342 aa12.39□□□□□ -0.43
COL6A1-202ENST00000463060 CD40P25942 277 aa12.39□□□□□ -0.43
COL6A1-202ENST00000463060 LOXP28300 417 aaPredicted RBP12.39□□□□□ -0.43
COL6A1-202ENST00000463060 CD200R1LQ6Q8B3 271 aa12.39□□□□□ -0.43
COL6A1-202ENST00000463060 ARL9Q6T311 187 aa12.39□□□□□ -0.43
COL6A1-202ENST00000463060 FAM57BQ71RH2 274 aa12.39□□□□□ -0.43
COL6A1-202ENST00000463060 WFDC8Q8IUA0 241 aa12.39□□□□□ -0.43
COL6A1-202ENST00000463060 PLPP7Q8NBV4 271 aa12.39□□□□□ -0.43
COL6A1-202ENST00000463060 OR52H1Q8NGJ2 320 aa12.39□□□□□ -0.43
COL6A1-202ENST00000463060 UFD1Q92890 307 aa12.39□□□□□ -0.43
COL6A1-202ENST00000463060 SPSB4Q96A44 273 aa12.39□□□□□ -0.43
COL6A1-202ENST00000463060 SGK3Q96BR1 496 aa12.39□□□□□ -0.43
COL6A1-202ENST00000463060 ZC3HAV1LQ96H79 300 aaKnown RBP12.39□□□□□ -0.43
COL6A1-202ENST00000463060 LYZL4Q96KX0 146 aa12.39□□□□□ -0.43
COL6A1-202ENST00000463060 PDCD1LG2Q9BQ51 273 aa12.39□□□□□ -0.43
COL6A1-202ENST00000463060 SP140LQ9H930 580 aa12.39□□□□□ -0.43
COL6A1-202ENST00000463060 BRD7Q9NPI1 651 aa12.39□□□□□ -0.43
COL6A1-202ENST00000463060 NDUFB11Q9NX14 153 aa12.39□□□□□ -0.43
COL6A1-202ENST00000463060 KLF2Q9Y5W3 355 aaPredicted RBP12.39□□□□□ -0.43
COL6A1-202ENST00000463060 CADP27708 2225 aa12.39□□□□□ -0.43
COL6A1-202ENST00000463060 TUBAL3A6NHL2 446 aa12.38□□□□□ -0.43
COL6A1-202ENST00000463060 TMEM212A6NML5 194 aa12.38□□□□□ -0.43
COL6A1-202ENST00000463060 M0R1B8 84 aa12.38□□□□□ -0.43
COL6A1-202ENST00000463060 SIAH2O43255 324 aa12.38□□□□□ -0.43
COL6A1-202ENST00000463060 SC5DO75845 299 aa12.38□□□□□ -0.43
COL6A1-202ENST00000463060 LCATP04180 440 aa12.38□□□□□ -0.43
COL6A1-202ENST00000463060 CCL1P22362 96 aa12.38□□□□□ -0.43
COL6A1-202ENST00000463060 CCNOP22674 350 aa12.38□□□□□ -0.43
COL6A1-202ENST00000463060 PEX19P40855 299 aa12.38□□□□□ -0.43
COL6A1-202ENST00000463060 UCP2P55851 309 aa12.38□□□□□ -0.43
COL6A1-202ENST00000463060 SLC3A1Q07837 685 aa12.38□□□□□ -0.43
COL6A1-202ENST00000463060 BCL2L15Q5TBC7 163 aa12.38□□□□□ -0.43
COL6A1-202ENST00000463060 ZNF544Q6NX49 715 aa12.38□□□□□ -0.43
COL6A1-202ENST00000463060 TMEM108Q6UXF1 575 aa12.38□□□□□ -0.43
COL6A1-202ENST00000463060 UNQ9370/PRO34162Q6UXP9 181 aa12.38□□□□□ -0.43
COL6A1-202ENST00000463060 ZNF704Q6ZNC4 412 aaPredicted RBP12.38□□□□□ -0.43
COL6A1-202ENST00000463060 DMRTC2Q8IXT2 367 aaPredicted RBP12.38□□□□□ -0.43
COL6A1-202ENST00000463060 RDH10Q8IZV5 341 aa12.38□□□□□ -0.43
COL6A1-202ENST00000463060 OR5AK2Q8NH90 309 aa12.38□□□□□ -0.43
COL6A1-202ENST00000463060 SSC4DQ8WTU2 575 aa12.38□□□□□ -0.43
COL6A1-202ENST00000463060 APOBEC3DQ96AK3 386 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms