RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 CCDC190Q86UF4 302 aa5.28□□□□□ -1.56
SMARCC1-204ENST00000462198 CALHM3Q86XJ0 350 aa5.28□□□□□ -1.56
SMARCC1-204ENST00000462198 MED12LQ86YW9 2145 aa5.28□□□□□ -1.56
SMARCC1-204ENST00000462198 SKA3Q8IX90 412 aa5.28□□□□□ -1.56
SMARCC1-204ENST00000462198 ZNF440Q8IYI8 595 aa5.28□□□□□ -1.56
SMARCC1-204ENST00000462198 ENTHD1Q8IYW4 607 aa5.28□□□□□ -1.56
SMARCC1-204ENST00000462198 OR8H3Q8N146 312 aa5.28□□□□□ -1.56
SMARCC1-204ENST00000462198 C12orf45Q8N5I9 185 aaPredicted RBP5.28□□□□□ -1.56
SMARCC1-204ENST00000462198 ARIH2OSQ8N7S6 290 aa5.28□□□□□ -1.56
SMARCC1-204ENST00000462198 C3orf56Q8N813 242 aa5.28□□□□□ -1.56
SMARCC1-204ENST00000462198 FADS6Q8N9I5 356 aa5.28□□□□□ -1.56
SMARCC1-204ENST00000462198 FAM83FQ8NEG4 500 aaPredicted RBP5.28□□□□□ -1.56
SMARCC1-204ENST00000462198 OR4M1Q8NGD0 313 aa5.28□□□□□ -1.56
SMARCC1-204ENST00000462198 OR6M1Q8NGM8 313 aa5.28□□□□□ -1.56
SMARCC1-204ENST00000462198 OR5W2Q8NH69 310 aa5.28□□□□□ -1.56
SMARCC1-204ENST00000462198 ZNF563Q8TA94 476 aa5.28□□□□□ -1.56
SMARCC1-204ENST00000462198 SFT2D1Q8WV19 159 aa5.28□□□□□ -1.56
SMARCC1-204ENST00000462198 NTNG2Q96CW9 530 aa5.28□□□□□ -1.56
SMARCC1-204ENST00000462198 NEU1Q99519 415 aa5.28□□□□□ -1.56
SMARCC1-204ENST00000462198 SDHCQ99643 169 aaPredicted RBP5.28□□□□□ -1.56
SMARCC1-204ENST00000462198 PIGQQ9BRB3 760 aa5.28□□□□□ -1.56
SMARCC1-204ENST00000462198 C2orf88Q9BSF0 95 aa5.28□□□□□ -1.56
SMARCC1-204ENST00000462198 COPS4Q9BT78 406 aa5.28□□□□□ -1.56
SMARCC1-204ENST00000462198 PINK1Q9BXM7 581 aa5.28□□□□□ -1.56
SMARCC1-204ENST00000462198 DGCR6LQ9BY27 220 aa5.28□□□□□ -1.56
SMARCC1-204ENST00000462198 LAT2Q9GZY6 243 aa5.28□□□□□ -1.56
SMARCC1-204ENST00000462198 UBQLN3Q9H347 655 aa5.28□□□□□ -1.56
SMARCC1-204ENST00000462198 SMURF2Q9HAU4 748 aa5.28□□□□□ -1.56
SMARCC1-204ENST00000462198 MYOZ1Q9NP98 299 aaPredicted RBP5.28□□□□□ -1.56
SMARCC1-204ENST00000462198 ACKR4Q9NPB9 350 aa5.28□□□□□ -1.56
SMARCC1-204ENST00000462198 POLE4Q9NR33 117 aa5.28□□□□□ -1.56
SMARCC1-204ENST00000462198 KRT84Q9NSB2 600 aa5.28□□□□□ -1.56
SMARCC1-204ENST00000462198 DCAF13Q9NV06 445 aaKnown RBP5.28□□□□□ -1.56
SMARCC1-204ENST00000462198 RDH8Q9NYR8 311 aa5.28□□□□□ -1.56
SMARCC1-204ENST00000462198 TAS2R10Q9NYW0 307 aa5.28□□□□□ -1.56
SMARCC1-204ENST00000462198 ERVK-18Q9QC07 812 aa5.28□□□□□ -1.56
SMARCC1-204ENST00000462198 SPRR3Q9UBC9 169 aa5.28□□□□□ -1.56
SMARCC1-204ENST00000462198 NDRG4Q9ULP0 352 aaKnown RBP5.28□□□□□ -1.56
SMARCC1-204ENST00000462198 MGAT4AQ9UM21 535 aa5.28□□□□□ -1.56
SMARCC1-204ENST00000462198 ICAM5Q9UMF0 924 aa5.28□□□□□ -1.56
SMARCC1-204ENST00000462198 VDAC3Q9Y277 283 aa5.28□□□□□ -1.56
SMARCC1-204ENST00000462198 ZNF443Q9Y2A4 671 aaPredicted RBP5.28□□□□□ -1.56
SMARCC1-204ENST00000462198 LYVE1Q9Y5Y7 322 aa5.28□□□□□ -1.56
SMARCC1-204ENST00000462198 V9GYQ6 96 aa5.28□□□□□ -1.56
SMARCC1-204ENST00000462198 CADP27708 2225 aa5.28□□□□□ -1.56
SMARCC1-204ENST00000462198 A0A075B6Q4 140 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 A0A087WZY1 265 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 A0A1W2PPL8 197 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 RPS10-NUDT3A0A1W2PQS6 291 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 CDHR4A6H8M9 788 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 EFCAB9A8MZ26 197 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 B4DXG7 233 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 MCIDASD6RGH6 385 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 CXCR6O00574 342 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 MITFO75030 526 aaPredicted RBP5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 IL18BPO95998 194 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 ACTL6AO96019 429 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 OPN1SWP03999 348 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 ACSM4P0C7M7 580 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 GKN3PP0CG01 181 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 COX5BP10606 129 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 APEHP13798 732 aaKnown RBP5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 PGCP20142 388 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 MYL9P24844 172 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 LAP3P28838 519 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 ACVR1BP36896 505 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 SLC6A8P48029 635 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 NCS1P62166 190 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 SLC3A1Q07837 685 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 SKP2Q13309 424 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 ASAH1Q13510 395 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 QPRTQ15274 297 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 TBCEQ15813 527 aaPredicted RBP5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 ETFDHQ16134 617 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 CARTPTQ16568 116 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 GLYR1Q49A26 553 aaPredicted RBP5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 ACSF3Q4G176 576 aaPredicted RBP5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 KDM4DQ6B0I6 523 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 VASNQ6EMK4 673 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 ENPP6Q6UWR7 440 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 FAM122BQ7Z309 247 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 ZNF550Q7Z398 422 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 TMEM179BQ7Z7N9 219 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 RDH10Q8IZV5 341 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 STPG2Q8N412 459 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 C9orf62Q8N4C0 152 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 PARP16Q8N5Y8 322 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 LRRC17Q8N6Y2 441 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 FAM86B1Q8N7N1 296 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 FAM71CQ8NEG0 241 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 OR5M1Q8NGP8 315 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 NEIL3Q8TAT5 605 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 TMEM234Q8WY98 164 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 CNOT9Q92600 299 aaKnown RBP5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 FAM162AQ96A26 154 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 ZBTB8AQ96BR9 441 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 TRMT61AQ96FX7 289 aaKnown RBP5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 TPD52L3Q96J77 140 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 MRGPRX4Q96LA9 322 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms