RNA–Protein interactions for RNA: ENST00000460696.1

NPHP4-204, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-204ENST00000460696 MAFIPQ8WZ33 124 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 GNRHR2Q96P88 292 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 MTFP1Q9UDX5 166 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 FBXO4Q9UKT5 387 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 B3GALT1Q9Y5Z6 326 aa10.43□□□□□ -0.74
NPHP4-204ENST00000460696 TCRBV16S1A1N1A0A5B0 115 aa10.42□□□□□ -0.74
NPHP4-204ENST00000460696 SDCBPO00560 298 aaPredicted RBP10.42□□□□□ -0.74
NPHP4-204ENST00000460696 AGPAT2O15120 278 aa10.42□□□□□ -0.74
NPHP4-204ENST00000460696 GALR2O43603 387 aaPredicted RBP10.42□□□□□ -0.74
NPHP4-204ENST00000460696 DBHP09172 617 aa10.42□□□□□ -0.74
NPHP4-204ENST00000460696 POU3F2P20265 443 aaPredicted RBP10.42□□□□□ -0.74
NPHP4-204ENST00000460696 SELENOPP49908 381 aa10.42□□□□□ -0.74
NPHP4-204ENST00000460696 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.42□□□□□ -0.74
NPHP4-204ENST00000460696 B3GNTL1Q67FW5 361 aaPredicted RBP10.42□□□□□ -0.74
NPHP4-204ENST00000460696 TMUB2Q71RG4 321 aa10.42□□□□□ -0.74
NPHP4-204ENST00000460696 P4HA3Q7Z4N8 544 aa10.42□□□□□ -0.74
NPHP4-204ENST00000460696 OR56B1Q8NGI3 324 aa10.42□□□□□ -0.74
NPHP4-204ENST00000460696 MFSD8Q8NHS3 518 aa10.42□□□□□ -0.74
NPHP4-204ENST00000460696 HRH3Q9Y5N1 445 aa10.42□□□□□ -0.74
NPHP4-204ENST00000460696 FREM3P0C091 2139 aa10.42□□□□□ -0.74
NPHP4-204ENST00000460696 ANKUB1A6NFN9 424 aa10.42□□□□□ -0.74
NPHP4-204ENST00000460696 PIN1P1O15428 100 aa10.42□□□□□ -0.74
NPHP4-204ENST00000460696 NDUFB6O95139 128 aa10.42□□□□□ -0.74
NPHP4-204ENST00000460696 OR4E1P0C645 316 aa10.42□□□□□ -0.74
NPHP4-204ENST00000460696 GLI4P10075 376 aa10.42□□□□□ -0.74
NPHP4-204ENST00000460696 GAS1P54826 345 aa10.42□□□□□ -0.74
NPHP4-204ENST00000460696 PLEKHN1Q494U1 663 aaPredicted RBP10.42□□□□□ -0.74
NPHP4-204ENST00000460696 THEM4Q5T1C6 240 aa10.42□□□□□ -0.74
NPHP4-204ENST00000460696 PMS2CLQ68D20 193 aa10.42□□□□□ -0.74
NPHP4-204ENST00000460696 GLDNQ6ZMI3 551 aaPredicted RBP10.42□□□□□ -0.74
NPHP4-204ENST00000460696 ZNF100Q8IYN0 542 aa10.42□□□□□ -0.74
NPHP4-204ENST00000460696 SNIP1Q8TAD8 396 aaKnown RBP10.42□□□□□ -0.74
NPHP4-204ENST00000460696 ZNF721Q8TF20 911 aa10.42□□□□□ -0.74
NPHP4-204ENST00000460696 MLXQ9UH92 298 aa10.42□□□□□ -0.74
NPHP4-204ENST00000460696 MEIKINA0A087WXM9 373 aa10.42□□□□□ -0.74
NPHP4-204ENST00000460696 CIB4A0PJX0 185 aa10.42□□□□□ -0.74
NPHP4-204ENST00000460696 RGS13O14921 159 aa10.42□□□□□ -0.74
NPHP4-204ENST00000460696 PET100P0DJ07 73 aa10.42□□□□□ -0.74
NPHP4-204ENST00000460696 CD79AP11912 226 aa10.42□□□□□ -0.74
NPHP4-204ENST00000460696 LUMP51884 338 aaPredicted RBP10.42□□□□□ -0.74
NPHP4-204ENST00000460696 AGFG1P52594 562 aaKnown RBP10.42□□□□□ -0.74
NPHP4-204ENST00000460696 EFNB2P52799 333 aa10.42□□□□□ -0.74
NPHP4-204ENST00000460696 VAMP2P63027 116 aa10.42□□□□□ -0.74
NPHP4-204ENST00000460696 CYCSP99999 105 aaKnown RBP10.42□□□□□ -0.74
NPHP4-204ENST00000460696 ZNF362Q5T0B9 420 aaPredicted RBP10.42□□□□□ -0.74
NPHP4-204ENST00000460696 ANKRD16Q6P6B7 361 aa10.42□□□□□ -0.74
NPHP4-204ENST00000460696 SLC16A14Q7RTX9 510 aa10.42□□□□□ -0.74
NPHP4-204ENST00000460696 GJC3Q8NFK1 279 aa10.42□□□□□ -0.74
NPHP4-204ENST00000460696 WDR89Q96FK6 387 aaPredicted RBP10.42□□□□□ -0.74
NPHP4-204ENST00000460696 MRGPRX4Q96LA9 322 aa10.42□□□□□ -0.74
NPHP4-204ENST00000460696 UBL7Q96S82 380 aaPredicted RBP10.42□□□□□ -0.74
NPHP4-204ENST00000460696 PPA2Q9H2U2 334 aa10.42□□□□□ -0.74
NPHP4-204ENST00000460696 B4GALT7Q9UBV7 327 aa10.42□□□□□ -0.74
NPHP4-204ENST00000460696 PADI1Q9ULC6 663 aa10.42□□□□□ -0.74
NPHP4-204ENST00000460696 PCDHGA1Q9Y5H4 931 aa10.42□□□□□ -0.74
NPHP4-204ENST00000460696 IGKV1D-42A0A075B6H8 117 aa10.41□□□□□ -0.74
NPHP4-204ENST00000460696 A0A0A6YYH2 397 aa10.41□□□□□ -0.74
NPHP4-204ENST00000460696 LNP1A1A4G5 178 aa10.41□□□□□ -0.74
NPHP4-204ENST00000460696 A6NJ64 397 aa10.41□□□□□ -0.74
NPHP4-204ENST00000460696 RER1O15258 196 aa10.41□□□□□ -0.74
NPHP4-204ENST00000460696 DDAH2O95865 285 aa10.41□□□□□ -0.74
NPHP4-204ENST00000460696 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.41□□□□□ -0.74
NPHP4-204ENST00000460696 ANKRD37Q7Z713 158 aa10.41□□□□□ -0.74
NPHP4-204ENST00000460696 IQCF2Q8IXL9 164 aa10.41□□□□□ -0.74
NPHP4-204ENST00000460696 RELL2Q8NC24 303 aaPredicted RBP10.41□□□□□ -0.74
NPHP4-204ENST00000460696 FAM71CQ8NEG0 241 aa10.41□□□□□ -0.74
NPHP4-204ENST00000460696 SLC25A43Q8WUT9 341 aaPredicted RBP10.41□□□□□ -0.74
NPHP4-204ENST00000460696 VRK1Q99986 396 aaPredicted RBP10.41□□□□□ -0.74
NPHP4-204ENST00000460696 SMIM3Q9BZL3 60 aa10.41□□□□□ -0.74
NPHP4-204ENST00000460696 DUSP15Q9H1R2 295 aaPredicted RBP10.41□□□□□ -0.74
NPHP4-204ENST00000460696 PCDHB16Q9NRJ7 776 aa10.41□□□□□ -0.74
NPHP4-204ENST00000460696 PCDHGA9Q9Y5G4 932 aaKnown RBP10.41□□□□□ -0.74
NPHP4-204ENST00000460696 TMEM272A0A1B0GTI8 110 aa10.41□□□□□ -0.74
NPHP4-204ENST00000460696 GUSBP08236 651 aa10.41□□□□□ -0.74
NPHP4-204ENST00000460696 ASAH2BP0C7U1 165 aa10.41□□□□□ -0.74
NPHP4-204ENST00000460696 ZNF16P17020 682 aaPredicted RBP10.41□□□□□ -0.74
NPHP4-204ENST00000460696 HRH1P35367 487 aa10.41□□□□□ -0.74
NPHP4-204ENST00000460696 ZNF121P58317 390 aaPredicted RBP10.41□□□□□ -0.74
NPHP4-204ENST00000460696 TAS2R31P59538 309 aa10.41□□□□□ -0.74
NPHP4-204ENST00000460696 MFGE8Q08431 387 aaPredicted RBP10.41□□□□□ -0.74
NPHP4-204ENST00000460696 ISXQ2M1V0 245 aa10.41□□□□□ -0.74
NPHP4-204ENST00000460696 FAM76BQ5HYJ3 339 aa10.41□□□□□ -0.74
NPHP4-204ENST00000460696 HES3Q5TGS1 186 aa10.41□□□□□ -0.74
NPHP4-204ENST00000460696 SGPP2Q8IWX5 399 aa10.41□□□□□ -0.74
NPHP4-204ENST00000460696 ESX1Q8N693 406 aa10.41□□□□□ -0.74
NPHP4-204ENST00000460696 TTC9Q92623 222 aa10.41□□□□□ -0.74
NPHP4-204ENST00000460696 SPACA9Q96E40 222 aaPredicted RBP10.41□□□□□ -0.74
NPHP4-204ENST00000460696 SCMH1Q96GD3 660 aa10.41□□□□□ -0.74
NPHP4-204ENST00000460696 ZNF700Q9H0M5 742 aa10.41□□□□□ -0.74
NPHP4-204ENST00000460696 MYOTQ9UBF9 498 aa10.41□□□□□ -0.74
NPHP4-204ENST00000460696 NXT1Q9UKK6 140 aaKnown RBP10.41□□□□□ -0.74
NPHP4-204ENST00000460696 A0A0B4J2A0 478 aa10.41□□□□□ -0.74
NPHP4-204ENST00000460696 HSPB2A8KAH6 182 aa10.41□□□□□ -0.74
NPHP4-204ENST00000460696 OR7C1O76099 320 aaPredicted RBP10.41□□□□□ -0.74
NPHP4-204ENST00000460696 TPOP07202 933 aa10.41□□□□□ -0.74
NPHP4-204ENST00000460696 GNRHRP30968 328 aa10.41□□□□□ -0.74
NPHP4-204ENST00000460696 EFNB1P98172 346 aa10.41□□□□□ -0.74
NPHP4-204ENST00000460696 HSPB2Q16082 182 aa10.41□□□□□ -0.74
NPHP4-204ENST00000460696 LYPD8Q6UX82 237 aa10.41□□□□□ -0.74
NPHP4-204ENST00000460696 D2HGDHQ8N465 521 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms