RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 WNT2P09544 360 aa19.09■□□□□ 0.65
PTPN4-207ENST00000460162 DBPQ10586 325 aaPredicted RBP19.09■□□□□ 0.65
PTPN4-207ENST00000460162 MOGAT3Q86VF5 341 aa19.09■□□□□ 0.65
PTPN4-207ENST00000460162 LINC00471Q8N535 108 aa19.09■□□□□ 0.65
PTPN4-207ENST00000460162 C3orf56Q8N813 242 aa19.09■□□□□ 0.65
PTPN4-207ENST00000460162 EGLN3Q9H6Z9 239 aa19.09■□□□□ 0.65
PTPN4-207ENST00000460162 ZMAT3Q9HA38 289 aaKnown RBP19.09■□□□□ 0.65
PTPN4-207ENST00000460162 TMEM165Q9HC07 324 aa19.09■□□□□ 0.65
PTPN4-207ENST00000460162 MIOXQ9UGB7 285 aa19.09■□□□□ 0.65
PTPN4-207ENST00000460162 ARL2BPQ9Y2Y0 163 aa19.09■□□□□ 0.65
PTPN4-207ENST00000460162 LYVE1Q9Y5Y7 322 aa19.09■□□□□ 0.65
PTPN4-207ENST00000460162 DCTN3O75935 186 aa19.08■□□□□ 0.64
PTPN4-207ENST00000460162 LCATP04180 440 aa19.08■□□□□ 0.64
PTPN4-207ENST00000460162 PPIAL4GP0DN37 164 aa19.08■□□□□ 0.64
PTPN4-207ENST00000460162 HMGA2P52926 109 aa19.08■□□□□ 0.64
PTPN4-207ENST00000460162 TPTEP56180 551 aa19.08■□□□□ 0.64
PTPN4-207ENST00000460162 ZNF404Q494X3 552 aa19.08■□□□□ 0.64
PTPN4-207ENST00000460162 KLF17Q5JT82 389 aaPredicted RBP19.08■□□□□ 0.64
PTPN4-207ENST00000460162 CLEC12AQ5QGZ9 265 aa19.08■□□□□ 0.64
PTPN4-207ENST00000460162 SLC35F1Q5T1Q4 408 aa19.08■□□□□ 0.64
PTPN4-207ENST00000460162 DOK3Q7L591 496 aa19.08■□□□□ 0.64
PTPN4-207ENST00000460162 KLBQ86Z14 1044 aa19.08■□□□□ 0.64
PTPN4-207ENST00000460162 DEFB107AQ8IZN7 70 aa19.08■□□□□ 0.64
PTPN4-207ENST00000460162 SPTSSAQ969W0 71 aa19.08■□□□□ 0.64
PTPN4-207ENST00000460162 ERGIC1Q969X5 290 aa19.08■□□□□ 0.64
PTPN4-207ENST00000460162 PLEKHA8Q96JA3 519 aa19.08■□□□□ 0.64
PTPN4-207ENST00000460162 MAP6Q96JE9 813 aa19.08■□□□□ 0.64
PTPN4-207ENST00000460162 ARL8BQ9NVJ2 186 aa19.08■□□□□ 0.64
PTPN4-207ENST00000460162 NOP16Q9Y3C1 178 aaKnown RBP19.08■□□□□ 0.64
PTPN4-207ENST00000460162 PPIAL4AQ9Y536 164 aa19.08■□□□□ 0.64
PTPN4-207ENST00000460162 M0R135 149 aa19.07■□□□□ 0.64
PTPN4-207ENST00000460162 BHLHE40O14503 412 aa19.07■□□□□ 0.64
PTPN4-207ENST00000460162 ZNF823P16415 610 aa19.07■□□□□ 0.64
PTPN4-207ENST00000460162 CD200P41217 278 aa19.07■□□□□ 0.64
PTPN4-207ENST00000460162 GNB2P62879 340 aa19.07■□□□□ 0.64
PTPN4-207ENST00000460162 MXRA7P84157 204 aa19.07■□□□□ 0.64
PTPN4-207ENST00000460162 PAX2Q02962 417 aa19.07■□□□□ 0.64
PTPN4-207ENST00000460162 BTNL3Q6UXE8 466 aa19.07■□□□□ 0.64
PTPN4-207ENST00000460162 PGAP1Q75T13 922 aa19.07■□□□□ 0.64
PTPN4-207ENST00000460162 NLRC3Q7RTR2 1065 aa19.07■□□□□ 0.64
PTPN4-207ENST00000460162 MRPL21Q7Z2W9 205 aaKnown RBP19.07■□□□□ 0.64
PTPN4-207ENST00000460162 SIGLECL1Q8N7X8 197 aa19.07■□□□□ 0.64
PTPN4-207ENST00000460162 PROKR2Q8NFJ6 384 aa19.07■□□□□ 0.64
PTPN4-207ENST00000460162 OR9Q2Q8NGE9 314 aa19.07■□□□□ 0.64
PTPN4-207ENST00000460162 OR2T4Q8NH00 348 aa19.07■□□□□ 0.64
PTPN4-207ENST00000460162 Q8TCH9 128 aa19.07■□□□□ 0.64
PTPN4-207ENST00000460162 NEIL1Q96FI4 390 aaPredicted RBP19.07■□□□□ 0.64
PTPN4-207ENST00000460162 ZNF799Q96GE5 643 aa19.07■□□□□ 0.64
PTPN4-207ENST00000460162 TMEM246Q9BRR3 403 aa19.07■□□□□ 0.64
PTPN4-207ENST00000460162 BTBD10Q9BSF8 475 aa19.07■□□□□ 0.64
PTPN4-207ENST00000460162 PLA2G12AQ9BZM1 189 aa19.07■□□□□ 0.64
PTPN4-207ENST00000460162 TRIM15Q9C019 465 aa19.07■□□□□ 0.64
PTPN4-207ENST00000460162 IL20Q9NYY1 176 aa19.07■□□□□ 0.64
PTPN4-207ENST00000460162 ZNF69Q9UC07 566 aa19.07■□□□□ 0.64
PTPN4-207ENST00000460162 DOCK11Q5JSL3 2073 aa19.07■□□□□ 0.64
PTPN4-207ENST00000460162 ZNF205O95201 554 aa19.06■□□□□ 0.64
PTPN4-207ENST00000460162 HLA-DPB1P04440 258 aa19.06■□□□□ 0.64
PTPN4-207ENST00000460162 IRF2P14316 349 aa19.06■□□□□ 0.64
PTPN4-207ENST00000460162 MAGEA2P43356 314 aa19.06■□□□□ 0.64
PTPN4-207ENST00000460162 PRSS12P56730 875 aa19.06■□□□□ 0.64
PTPN4-207ENST00000460162 PAX8Q06710 450 aa19.06■□□□□ 0.64
PTPN4-207ENST00000460162 LRRN1Q6UXK5 716 aa19.06■□□□□ 0.64
PTPN4-207ENST00000460162 OR8B3Q8NGG8 313 aa19.06■□□□□ 0.64
PTPN4-207ENST00000460162 OR10S1Q8NGN2 331 aa19.06■□□□□ 0.64
PTPN4-207ENST00000460162 SLCO4A1Q96BD0 722 aa19.06■□□□□ 0.64
PTPN4-207ENST00000460162 OR8B2Q96RD0 313 aa19.06■□□□□ 0.64
PTPN4-207ENST00000460162 DDOQ99489 341 aa19.06■□□□□ 0.64
PTPN4-207ENST00000460162 SLC22A4Q9H015 551 aa19.06■□□□□ 0.64
PTPN4-207ENST00000460162 ACTR3BQ9P1U1 418 aa19.06■□□□□ 0.64
PTPN4-207ENST00000460162 IGHV2-70DA0A0C4DH43 119 aa19.05■□□□□ 0.64
PTPN4-207ENST00000460162 IGHV3-64DA0A0J9YX35 117 aa19.05■□□□□ 0.64
PTPN4-207ENST00000460162 TNFRSF11BO00300 401 aa19.05■□□□□ 0.64
PTPN4-207ENST00000460162 ATP6V1B2P21281 511 aa19.05■□□□□ 0.64
PTPN4-207ENST00000460162 OTX1P32242 354 aaPredicted RBP19.05■□□□□ 0.64
PTPN4-207ENST00000460162 PYCR1P32322 319 aa19.05■□□□□ 0.64
PTPN4-207ENST00000460162 RAD23AP54725 363 aa19.05■□□□□ 0.64
PTPN4-207ENST00000460162 GNGT1P63211 74 aa19.05■□□□□ 0.64
PTPN4-207ENST00000460162 MAB21L1Q13394 359 aa19.05■□□□□ 0.64
PTPN4-207ENST00000460162 AWAT1Q58HT5 328 aa19.05■□□□□ 0.64
PTPN4-207ENST00000460162 RASSF6Q6ZTQ3 369 aa19.05■□□□□ 0.64
PTPN4-207ENST00000460162 CYB561A3Q8NBI2 242 aa19.05■□□□□ 0.64
PTPN4-207ENST00000460162 OR4C15Q8NGM1 316 aa19.05■□□□□ 0.64
PTPN4-207ENST00000460162 OR11L1Q8NGX0 322 aa19.05■□□□□ 0.64
PTPN4-207ENST00000460162 SPRYD4Q8WW59 207 aaPredicted RBP19.05■□□□□ 0.64
PTPN4-207ENST00000460162 DACT3Q96B18 629 aaPredicted RBP19.05■□□□□ 0.64
PTPN4-207ENST00000460162 COMMD3-BMI1R4GMX3 469 aa19.05■□□□□ 0.64
PTPN4-207ENST00000460162 DNAJC9-AS1A6NH13 148 aa19.04■□□□□ 0.64
PTPN4-207ENST00000460162 CD80P33681 288 aa19.04■□□□□ 0.64
PTPN4-207ENST00000460162 PMELP40967 661 aa19.04■□□□□ 0.64
PTPN4-207ENST00000460162 PITPNBP48739 271 aa19.04■□□□□ 0.64
PTPN4-207ENST00000460162 MNAT1P51948 309 aa19.04■□□□□ 0.64
PTPN4-207ENST00000460162 ZNF770Q6IQ21 691 aaPredicted RBP19.04■□□□□ 0.64
PTPN4-207ENST00000460162 CYP2R1Q6VVX0 501 aa19.04■□□□□ 0.64
PTPN4-207ENST00000460162 DCDC5Q6ZRR9 648 aa19.04■□□□□ 0.64
PTPN4-207ENST00000460162 PIGWQ7Z7B1 504 aa19.04■□□□□ 0.64
PTPN4-207ENST00000460162 NAA40Q86UY6 237 aa19.04■□□□□ 0.64
PTPN4-207ENST00000460162 PARP8Q8N3A8 854 aa19.04■□□□□ 0.64
PTPN4-207ENST00000460162 OR8D4Q8NGM9 314 aa19.04■□□□□ 0.64
PTPN4-207ENST00000460162 RAB40AQ8WXH6 277 aa19.04■□□□□ 0.64
PTPN4-207ENST00000460162 UPRTQ96BW1 309 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms