RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 OR10S1Q8NGN2 331 aa13.63□□□□□ -0.23
COL7A1-203ENST00000459756 OR6K6Q8NGW6 343 aa13.63□□□□□ -0.23
COL7A1-203ENST00000459756 OR2V2Q96R30 315 aa13.63□□□□□ -0.23
COL7A1-203ENST00000459756 GAL3ST1Q99999 423 aa13.63□□□□□ -0.23
COL7A1-203ENST00000459756 WDR76Q9H967 626 aa13.63□□□□□ -0.23
COL7A1-203ENST00000459756 ZNF556Q9HAH1 456 aa13.63□□□□□ -0.23
COL7A1-203ENST00000459756 TMEM106BQ9NUM4 274 aa13.63□□□□□ -0.23
COL7A1-203ENST00000459756 DNAJB9Q9UBS3 223 aa13.63□□□□□ -0.23
COL7A1-203ENST00000459756 PPP1R3CQ9UQK1 317 aa13.63□□□□□ -0.23
COL7A1-203ENST00000459756 DNHD1Q96M86 4753 aa13.62□□□□□ -0.23
COL7A1-203ENST00000459756 DYSFO75923 2080 aa13.62□□□□□ -0.23
COL7A1-203ENST00000459756 ISPDA4D126 451 aa13.62□□□□□ -0.23
COL7A1-203ENST00000459756 M0R135 149 aa13.62□□□□□ -0.23
COL7A1-203ENST00000459756 ZNF593O00488 134 aaPredicted RBP13.62□□□□□ -0.23
COL7A1-203ENST00000459756 IGHV2-5P01817 119 aa13.62□□□□□ -0.23
COL7A1-203ENST00000459756 SPARCP09486 303 aa13.62□□□□□ -0.23
COL7A1-203ENST00000459756 OTX1P32242 354 aaPredicted RBP13.62□□□□□ -0.23
COL7A1-203ENST00000459756 GK2Q14410 553 aaPredicted RBP13.62□□□□□ -0.23
COL7A1-203ENST00000459756 DCXRQ7Z4W1 244 aa13.62□□□□□ -0.23
COL7A1-203ENST00000459756 NAA40Q86UY6 237 aa13.62□□□□□ -0.23
COL7A1-203ENST00000459756 IQCF1Q8N6M8 205 aa13.62□□□□□ -0.23
COL7A1-203ENST00000459756 ZNF283Q8N7M2 679 aa13.62□□□□□ -0.23
COL7A1-203ENST00000459756 ZNF511Q8NB15 262 aa13.62□□□□□ -0.23
COL7A1-203ENST00000459756 ITLN1Q8WWA0 313 aa13.62□□□□□ -0.23
COL7A1-203ENST00000459756 ZNF799Q96GE5 643 aa13.62□□□□□ -0.23
COL7A1-203ENST00000459756 SLC30A2Q9BRI3 323 aa13.62□□□□□ -0.23
COL7A1-203ENST00000459756 NPTNQ9Y639 398 aa13.62□□□□□ -0.23
COL7A1-203ENST00000459756 A0A1B0GWJ7 208 aa13.61□□□□□ -0.23
COL7A1-203ENST00000459756 ERICH4A6NGS2 130 aa13.61□□□□□ -0.23
COL7A1-203ENST00000459756 IFNL4K9M1U5 179 aa13.61□□□□□ -0.23
COL7A1-203ENST00000459756 PHF1O43189 567 aaPredicted RBP13.61□□□□□ -0.23
COL7A1-203ENST00000459756 TIPRLO75663 272 aa13.61□□□□□ -0.23
COL7A1-203ENST00000459756 CLUP10909 449 aa13.61□□□□□ -0.23
COL7A1-203ENST00000459756 PSKH1P11801 424 aa13.61□□□□□ -0.23
COL7A1-203ENST00000459756 ANXA8P13928 327 aa13.61□□□□□ -0.23
COL7A1-203ENST00000459756 PAICSP22234 425 aaKnown RBP13.61□□□□□ -0.23
COL7A1-203ENST00000459756 POU1F1P28069 291 aa13.61□□□□□ -0.23
COL7A1-203ENST00000459756 SRP14P37108 136 aaKnown RBP13.61□□□□□ -0.23
COL7A1-203ENST00000459756 SLC6A9P48067 706 aa13.61□□□□□ -0.23
COL7A1-203ENST00000459756 SRP9P49458 86 aaKnown RBP13.61□□□□□ -0.23
COL7A1-203ENST00000459756 KPNB1Q14974 876 aaKnown RBP13.61□□□□□ -0.23
COL7A1-203ENST00000459756 LINC01590Q5TEZ4 76 aa13.61□□□□□ -0.23
COL7A1-203ENST00000459756 DRAM2Q6UX65 266 aa13.61□□□□□ -0.23
COL7A1-203ENST00000459756 PGAP1Q75T13 922 aa13.61□□□□□ -0.23
COL7A1-203ENST00000459756 BHLHE23Q8NDY6 225 aa13.61□□□□□ -0.23
COL7A1-203ENST00000459756 OR10AD1Q8NGE0 317 aa13.61□□□□□ -0.23
COL7A1-203ENST00000459756 SLCO4A1Q96BD0 722 aa13.61□□□□□ -0.23
COL7A1-203ENST00000459756 COPS4Q9BT78 406 aa13.61□□□□□ -0.23
COL7A1-203ENST00000459756 GCM1Q9NP62 436 aa13.61□□□□□ -0.23
COL7A1-203ENST00000459756 TMEM100Q9NV29 134 aa13.61□□□□□ -0.23
COL7A1-203ENST00000459756 FAM183AA6NL82 134 aa13.6□□□□□ -0.23
COL7A1-203ENST00000459756 RNF212BA8MTL3 300 aa13.6□□□□□ -0.23
COL7A1-203ENST00000459756 PLPP2O43688 288 aa13.6□□□□□ -0.23
COL7A1-203ENST00000459756 IGHV2-70P01814 119 aa13.6□□□□□ -0.23
COL7A1-203ENST00000459756 HMGN1P05114 100 aa13.6□□□□□ -0.23
COL7A1-203ENST00000459756 OSMP13725 252 aa13.6□□□□□ -0.23
COL7A1-203ENST00000459756 GINS1Q14691 196 aa13.6□□□□□ -0.23
COL7A1-203ENST00000459756 TAF13Q15543 124 aa13.6□□□□□ -0.23
COL7A1-203ENST00000459756 ZSCAN26Q16670 478 aa13.6□□□□□ -0.23
COL7A1-203ENST00000459756 MRPL21Q7Z2W9 205 aaKnown RBP13.6□□□□□ -0.23
COL7A1-203ENST00000459756 HS3ST5Q8IZT8 346 aa13.6□□□□□ -0.23
COL7A1-203ENST00000459756 SPICQ8N5J4 248 aa13.6□□□□□ -0.23
COL7A1-203ENST00000459756 SPATA3Q8NHX4 192 aa13.6□□□□□ -0.23
COL7A1-203ENST00000459756 ST7LQ8TDW4 575 aa13.6□□□□□ -0.23
COL7A1-203ENST00000459756 TMEM158Q8WZ71 300 aa13.6□□□□□ -0.23
COL7A1-203ENST00000459756 SLAMF6Q96DU3 332 aa13.6□□□□□ -0.23
COL7A1-203ENST00000459756 NRBF2Q96F24 287 aa13.6□□□□□ -0.23
COL7A1-203ENST00000459756 MEGF10Q96KG7 1140 aa13.6□□□□□ -0.23
COL7A1-203ENST00000459756 RAB3IPQ96QF0 476 aaPredicted RBP13.6□□□□□ -0.23
COL7A1-203ENST00000459756 INTS14Q96SY0 518 aa13.6□□□□□ -0.23
COL7A1-203ENST00000459756 KCNJ15Q99712 375 aa13.6□□□□□ -0.23
COL7A1-203ENST00000459756 MED20Q9H944 212 aa13.6□□□□□ -0.23
COL7A1-203ENST00000459756 CENPMQ9NSP4 180 aa13.6□□□□□ -0.23
COL7A1-203ENST00000459756 DCAF16Q9NXF7 216 aa13.6□□□□□ -0.23
COL7A1-203ENST00000459756 ZNF878C9JN71 531 aa13.59□□□□□ -0.23
COL7A1-203ENST00000459756 ANKRD65E5RJM6 399 aa13.59□□□□□ -0.23
COL7A1-203ENST00000459756 MLNRO43193 412 aa13.59□□□□□ -0.23
COL7A1-203ENST00000459756 GLCEO94923 617 aa13.59□□□□□ -0.23
COL7A1-203ENST00000459756 PNPP00491 289 aa13.59□□□□□ -0.23
COL7A1-203ENST00000459756 SBK2P0C263 348 aa13.59□□□□□ -0.23
COL7A1-203ENST00000459756 GSTT1P30711 240 aa13.59□□□□□ -0.23
COL7A1-203ENST00000459756 SLC15A1P46059 708 aa13.59□□□□□ -0.23
COL7A1-203ENST00000459756 MMP16P51512 607 aa13.59□□□□□ -0.23
COL7A1-203ENST00000459756 BTG1P62324 171 aa13.59□□□□□ -0.23
COL7A1-203ENST00000459756 SNAI3Q3KNW1 292 aa13.59□□□□□ -0.23
COL7A1-203ENST00000459756 TMEM155Q4W5P6 130 aa13.59□□□□□ -0.23
COL7A1-203ENST00000459756 FAHD2BQ6P2I3 314 aaPredicted RBP13.59□□□□□ -0.23
COL7A1-203ENST00000459756 SHQ1Q6PI26 577 aaKnown RBP13.59□□□□□ -0.23
COL7A1-203ENST00000459756 KLHL36Q8N4N3 616 aa13.59□□□□□ -0.23
COL7A1-203ENST00000459756 TEX29Q8N6K0 151 aa13.59□□□□□ -0.23
COL7A1-203ENST00000459756 SPRYD4Q8WW59 207 aaPredicted RBP13.59□□□□□ -0.23
COL7A1-203ENST00000459756 DNAJC9Q8WXX5 260 aa13.59□□□□□ -0.23
COL7A1-203ENST00000459756 OTULINQ96BN8 352 aa13.59□□□□□ -0.23
COL7A1-203ENST00000459756 FAHD2AQ96GK7 314 aa13.59□□□□□ -0.23
COL7A1-203ENST00000459756 SIGLEC11Q96RL6 698 aa13.59□□□□□ -0.23
COL7A1-203ENST00000459756 TEX12Q9BXU0 123 aa13.59□□□□□ -0.23
COL7A1-203ENST00000459756 MARCH7Q9H992 704 aa13.59□□□□□ -0.23
COL7A1-203ENST00000459756 G6PC2Q9NQR9 355 aa13.59□□□□□ -0.23
COL7A1-203ENST00000459756 UBAP1Q9NZ09 502 aa13.59□□□□□ -0.23
COL7A1-203ENST00000459756 NOP16Q9Y3C1 178 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms