RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 DDX28Q9NUL7 540 aaKnown RBP11.25□□□□□ -0.61
VPS33A-202ENST00000451053 BABAM2Q9NXR7 383 aa11.25□□□□□ -0.61
VPS33A-202ENST00000451053 ATPIF1Q9UII2 106 aa11.25□□□□□ -0.61
VPS33A-202ENST00000451053 GNG8Q9UK08 70 aa11.25□□□□□ -0.61
VPS33A-202ENST00000451053 BAHCC1Q9P281 2608 aa11.24□□□□□ -0.61
VPS33A-202ENST00000451053 HS3ST1O14792 307 aa11.24□□□□□ -0.61
VPS33A-202ENST00000451053 INMTO95050 263 aa11.24□□□□□ -0.61
VPS33A-202ENST00000451053 H2BFMP0C1H6 154 aa11.24□□□□□ -0.61
VPS33A-202ENST00000451053 FAM157BP0CG42 384 aa11.24□□□□□ -0.61
VPS33A-202ENST00000451053 HSMCR30P0CW71 290 aa11.24□□□□□ -0.61
VPS33A-202ENST00000451053 NR4A1P22736 598 aa11.24□□□□□ -0.61
VPS33A-202ENST00000451053 RIDAP52758 137 aaKnown RBP11.24□□□□□ -0.61
VPS33A-202ENST00000451053 GRB2P62993 217 aaKnown RBP11.24□□□□□ -0.61
VPS33A-202ENST00000451053 NKX6-1P78426 367 aaPredicted RBP11.24□□□□□ -0.61
VPS33A-202ENST00000451053 GALK2Q01415 458 aa11.24□□□□□ -0.61
VPS33A-202ENST00000451053 ECH1Q13011 328 aa11.24□□□□□ -0.61
VPS33A-202ENST00000451053 SNTB2Q13425 540 aaKnown RBP11.24□□□□□ -0.61
VPS33A-202ENST00000451053 TAF13Q15543 124 aa11.24□□□□□ -0.61
VPS33A-202ENST00000451053 CCDC58Q4VC31 144 aa11.24□□□□□ -0.61
VPS33A-202ENST00000451053 TP53I3Q53FA7 332 aa11.24□□□□□ -0.61
VPS33A-202ENST00000451053 ZNF684Q5T5D7 378 aa11.24□□□□□ -0.61
VPS33A-202ENST00000451053 YIPF7Q8N8F6 280 aa11.24□□□□□ -0.61
VPS33A-202ENST00000451053 ZNF485Q8NCK3 441 aa11.24□□□□□ -0.61
VPS33A-202ENST00000451053 NUP37Q8NFH4 326 aa11.24□□□□□ -0.61
VPS33A-202ENST00000451053 GATAD2BQ8WXI9 593 aa11.24□□□□□ -0.61
VPS33A-202ENST00000451053 NRGNQ92686 78 aa11.24□□□□□ -0.61
VPS33A-202ENST00000451053 C4orf45Q96LM5 186 aa11.24□□□□□ -0.61
VPS33A-202ENST00000451053 OR5M11Q96RB7 305 aa11.24□□□□□ -0.61
VPS33A-202ENST00000451053 UBTD1Q9HAC8 227 aa11.24□□□□□ -0.61
VPS33A-202ENST00000451053 CISD1Q9NZ45 108 aaKnown RBP11.24□□□□□ -0.61
VPS33A-202ENST00000451053 NDUFA13Q9P0J0 144 aa11.24□□□□□ -0.61
VPS33A-202ENST00000451053 GRIP1Q9Y3R0 1128 aa11.24□□□□□ -0.61
VPS33A-202ENST00000451053 CADP27708 2225 aa11.23□□□□□ -0.61
VPS33A-202ENST00000451053 F5H5K5 113 aa11.23□□□□□ -0.61
VPS33A-202ENST00000451053 PSMD9O00233 223 aa11.23□□□□□ -0.61
VPS33A-202ENST00000451053 GPRIN2O60269 458 aa11.23□□□□□ -0.61
VPS33A-202ENST00000451053 SMPD2O60906 423 aa11.23□□□□□ -0.61
VPS33A-202ENST00000451053 NGFP01138 241 aa11.23□□□□□ -0.61
VPS33A-202ENST00000451053 APOC1P02654 83 aa11.23□□□□□ -0.61
VPS33A-202ENST00000451053 ACSM4P0C7M7 580 aa11.23□□□□□ -0.61
VPS33A-202ENST00000451053 ANOS1P23352 680 aa11.23□□□□□ -0.61
VPS33A-202ENST00000451053 PCSK6P29122 969 aa11.23□□□□□ -0.61
VPS33A-202ENST00000451053 DCTDP32321 178 aa11.23□□□□□ -0.61
VPS33A-202ENST00000451053 THBS4P35443 961 aa11.23□□□□□ -0.61
VPS33A-202ENST00000451053 OPRL1P41146 370 aa11.23□□□□□ -0.61
VPS33A-202ENST00000451053 TGM4P49221 684 aa11.23□□□□□ -0.61
VPS33A-202ENST00000451053 OR12D2P58182 307 aa11.23□□□□□ -0.61
VPS33A-202ENST00000451053 ERVS71-1P61550 626 aa11.23□□□□□ -0.61
VPS33A-202ENST00000451053 GPR50Q13585 617 aa11.23□□□□□ -0.61
VPS33A-202ENST00000451053 MSMPQ1L6U9 139 aa11.23□□□□□ -0.61
VPS33A-202ENST00000451053 ZNF829Q3KNS6 432 aaPredicted RBP11.23□□□□□ -0.61
VPS33A-202ENST00000451053 ARMCX4Q5H9R4 360 aa11.23□□□□□ -0.61
VPS33A-202ENST00000451053 VHLLQ6RSH7 139 aa11.23□□□□□ -0.61
VPS33A-202ENST00000451053 LRRN1Q6UXK5 716 aa11.23□□□□□ -0.61
VPS33A-202ENST00000451053 RFPL4BQ6ZWI9 263 aa11.23□□□□□ -0.61
VPS33A-202ENST00000451053 NAA40Q86UY6 237 aa11.23□□□□□ -0.61
VPS33A-202ENST00000451053 KLBQ86Z14 1044 aa11.23□□□□□ -0.61
VPS33A-202ENST00000451053 OR13F1Q8NGS4 319 aa11.23□□□□□ -0.61
VPS33A-202ENST00000451053 UFD1Q92890 307 aa11.23□□□□□ -0.61
VPS33A-202ENST00000451053 ISG20L2Q9H9L3 353 aaKnown RBP11.23□□□□□ -0.61
VPS33A-202ENST00000451053 ELOVL3Q9HB03 270 aa11.23□□□□□ -0.61
VPS33A-202ENST00000451053 SLCO1C1Q9NYB5 712 aa11.23□□□□□ -0.61
VPS33A-202ENST00000451053 EIF3KQ9UBQ5 218 aaKnown RBP11.23□□□□□ -0.61
VPS33A-202ENST00000451053 MRM2Q9UI43 246 aaKnown RBP11.23□□□□□ -0.61
VPS33A-202ENST00000451053 RAI1Q7Z5J4 1906 aaPredicted RBP11.23□□□□□ -0.61
VPS33A-202ENST00000451053 SMIM31A0A1B0GVY4 71 aa11.22□□□□□ -0.61
VPS33A-202ENST00000451053 M0R135 149 aa11.22□□□□□ -0.61
VPS33A-202ENST00000451053 CCRL2O00421 344 aa11.22□□□□□ -0.61
VPS33A-202ENST00000451053 MAGEB4O15481 346 aaPredicted RBP11.22□□□□□ -0.61
VPS33A-202ENST00000451053 ICMTO60725 284 aa11.22□□□□□ -0.61
VPS33A-202ENST00000451053 ABHD16AO95870 558 aa11.22□□□□□ -0.61
VPS33A-202ENST00000451053 CPEP16870 476 aa11.22□□□□□ -0.61
VPS33A-202ENST00000451053 CD53P19397 219 aa11.22□□□□□ -0.61
VPS33A-202ENST00000451053 HSD11B1P28845 292 aa11.22□□□□□ -0.61
VPS33A-202ENST00000451053 OTX1P32242 354 aaPredicted RBP11.22□□□□□ -0.61
VPS33A-202ENST00000451053 PRKXP51817 358 aa11.22□□□□□ -0.61
VPS33A-202ENST00000451053 GP2P55259 537 aaKnown RBP11.22□□□□□ -0.61
VPS33A-202ENST00000451053 UCP2P55851 309 aa11.22□□□□□ -0.61
VPS33A-202ENST00000451053 RPL22L1Q6P5R6 122 aaKnown RBP11.22□□□□□ -0.61
VPS33A-202ENST00000451053 ABHD4Q8TB40 342 aa11.22□□□□□ -0.61
VPS33A-202ENST00000451053 TMEM171Q8WVE6 324 aa11.22□□□□□ -0.61
VPS33A-202ENST00000451053 FBXW5Q969U6 566 aa11.22□□□□□ -0.61
VPS33A-202ENST00000451053 SPTSSAQ969W0 71 aa11.22□□□□□ -0.61
VPS33A-202ENST00000451053 PELI1Q96FA3 418 aa11.22□□□□□ -0.61
VPS33A-202ENST00000451053 ZNF799Q96GE5 643 aa11.22□□□□□ -0.61
VPS33A-202ENST00000451053 OPALINQ96PE5 141 aa11.22□□□□□ -0.61
VPS33A-202ENST00000451053 DCLRE1CQ96SD1 692 aaKnown RBP11.22□□□□□ -0.61
VPS33A-202ENST00000451053 KCNJ15Q99712 375 aa11.22□□□□□ -0.61
VPS33A-202ENST00000451053 DHRS9Q9BPW9 319 aa11.22□□□□□ -0.61
VPS33A-202ENST00000451053 LIME1Q9H400 295 aa11.22□□□□□ -0.61
VPS33A-202ENST00000451053 POFUT1Q9H488 388 aa11.22□□□□□ -0.61
VPS33A-202ENST00000451053 HEATR1Q9H583 2144 aaKnown RBP11.22□□□□□ -0.61
VPS33A-202ENST00000451053 CA10Q9NS85 328 aa11.22□□□□□ -0.61
VPS33A-202ENST00000451053 ACOXLQ9NUZ1 547 aa11.22□□□□□ -0.61
VPS33A-202ENST00000451053 SPEF1Q9Y4P9 236 aa11.22□□□□□ -0.61
VPS33A-202ENST00000451053 LRP12Q9Y561 859 aa11.22□□□□□ -0.61
VPS33A-202ENST00000451053 HECTD1Q9ULT8 2610 aa11.21□□□□□ -0.61
VPS33A-202ENST00000451053 C5orf63A6NC05 138 aa11.21□□□□□ -0.61
VPS33A-202ENST00000451053 NOL3O60936 208 aaKnown RBP11.21□□□□□ -0.61
VPS33A-202ENST00000451053 SLC2A1P11166 492 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms