RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 PRRT1Q99946 306 aa12.16□□□□□ -0.46
POLR1B-209ENST00000448770 EMC6Q9BV81 110 aa12.16□□□□□ -0.46
POLR1B-209ENST00000448770 MTIF3Q9H2K0 278 aaKnown RBP12.16□□□□□ -0.46
POLR1B-209ENST00000448770 CYTL1Q9NRR1 136 aa12.16□□□□□ -0.46
POLR1B-209ENST00000448770 A0A1W2PP11 408 aa12.15□□□□□ -0.46
POLR1B-209ENST00000448770 CRHP06850 196 aa12.15□□□□□ -0.46
POLR1B-209ENST00000448770 RAB6AP20340 208 aa12.15□□□□□ -0.46
POLR1B-209ENST00000448770 MPZP25189 248 aa12.15□□□□□ -0.46
POLR1B-209ENST00000448770 SERPINF1P36955 418 aa12.15□□□□□ -0.46
POLR1B-209ENST00000448770 PRKXP51817 358 aa12.15□□□□□ -0.46
POLR1B-209ENST00000448770 MEF2DQ14814 521 aa12.15□□□□□ -0.46
POLR1B-209ENST00000448770 ELAVL1Q15717 326 aaKnown RBP12.15□□□□□ -0.46
POLR1B-209ENST00000448770 GRINAQ7Z429 371 aa12.15□□□□□ -0.46
POLR1B-209ENST00000448770 TMEM17Q86X19 198 aa12.15□□□□□ -0.46
POLR1B-209ENST00000448770 ZNF441Q8N8Z8 693 aa12.15□□□□□ -0.46
POLR1B-209ENST00000448770 ZSCAN4Q8NAM6 433 aaPredicted RBP12.15□□□□□ -0.46
POLR1B-209ENST00000448770 TMEM104Q8NE00 496 aa12.15□□□□□ -0.46
POLR1B-209ENST00000448770 OR4A4PQ8NGN8 299 aa12.15□□□□□ -0.46
POLR1B-209ENST00000448770 OR13C9Q8NGT0 318 aa12.15□□□□□ -0.46
POLR1B-209ENST00000448770 TMEM230Q96A57 120 aa12.15□□□□□ -0.46
POLR1B-209ENST00000448770 PTX4Q96A99 478 aa12.15□□□□□ -0.46
POLR1B-209ENST00000448770 CDCA3Q99618 268 aaPredicted RBP12.15□□□□□ -0.46
POLR1B-209ENST00000448770 PDE7BQ9NP56 450 aa12.15□□□□□ -0.46
POLR1B-209ENST00000448770 CSAG2Q9Y5P2 127 aa12.15□□□□□ -0.46
POLR1B-209ENST00000448770 TMEM218A2RU14 115 aa12.15□□□□□ -0.46
POLR1B-209ENST00000448770 MEGF11A6BM72 1044 aa12.15□□□□□ -0.46
POLR1B-209ENST00000448770 FGF16O43320 207 aa12.15□□□□□ -0.46
POLR1B-209ENST00000448770 AHSA1O95433 338 aa12.15□□□□□ -0.46
POLR1B-209ENST00000448770 RAB3AP20336 220 aa12.15□□□□□ -0.46
POLR1B-209ENST00000448770 TDGQ13569 410 aa12.15□□□□□ -0.46
POLR1B-209ENST00000448770 HFEQ30201 348 aa12.15□□□□□ -0.46
POLR1B-209ENST00000448770 C1orf189Q5VU69 101 aa12.15□□□□□ -0.46
POLR1B-209ENST00000448770 ZDHHC22Q8N966 263 aa12.15□□□□□ -0.46
POLR1B-209ENST00000448770 ELP5Q8TE02 316 aa12.15□□□□□ -0.46
POLR1B-209ENST00000448770 LMX1AQ8TE12 382 aa12.15□□□□□ -0.46
POLR1B-209ENST00000448770 PHYHIPLQ96FC7 376 aa12.15□□□□□ -0.46
POLR1B-209ENST00000448770 PIK3IP1Q96FE7 263 aa12.15□□□□□ -0.46
POLR1B-209ENST00000448770 KLHDC7BQ96G42 594 aa12.15□□□□□ -0.46
POLR1B-209ENST00000448770 SAV1Q9H4B6 383 aaPredicted RBP12.15□□□□□ -0.46
POLR1B-209ENST00000448770 TMEM231Q9H6L2 316 aa12.15□□□□□ -0.46
POLR1B-209ENST00000448770 HPF1Q9NWY4 346 aa12.15□□□□□ -0.46
POLR1B-209ENST00000448770 RAB22AQ9UL26 194 aa12.15□□□□□ -0.46
POLR1B-209ENST00000448770 MMACHCQ9Y4U1 282 aa12.15□□□□□ -0.46
POLR1B-209ENST00000448770 C13orf42A0A1B0GVH6 325 aa12.14□□□□□ -0.47
POLR1B-209ENST00000448770 PCP4L1A6NKN8 68 aa12.14□□□□□ -0.47
POLR1B-209ENST00000448770 TO15178 435 aa12.14□□□□□ -0.47
POLR1B-209ENST00000448770 RAD51DO75771 328 aa12.14□□□□□ -0.47
POLR1B-209ENST00000448770 ZNF823P16415 610 aa12.14□□□□□ -0.47
POLR1B-209ENST00000448770 PI3P19957 117 aa12.14□□□□□ -0.47
POLR1B-209ENST00000448770 BCKDHBP21953 392 aa12.14□□□□□ -0.47
POLR1B-209ENST00000448770 CRABP1P29762 137 aa12.14□□□□□ -0.47
POLR1B-209ENST00000448770 GNALP38405 381 aa12.14□□□□□ -0.47
POLR1B-209ENST00000448770 POU3F1Q03052 451 aaPredicted RBP12.14□□□□□ -0.47
POLR1B-209ENST00000448770 NSDHLQ15738 373 aa12.14□□□□□ -0.47
POLR1B-209ENST00000448770 PLAC9Q5JTB6 97 aa12.14□□□□□ -0.47
POLR1B-209ENST00000448770 NKAIN3Q8N8D7 197 aa12.14□□□□□ -0.47
POLR1B-209ENST00000448770 OR1L3Q8NH93 324 aa12.14□□□□□ -0.47
POLR1B-209ENST00000448770 RNF133Q8WVZ7 376 aa12.14□□□□□ -0.47
POLR1B-209ENST00000448770 C11orf40Q8WZ69 217 aa12.14□□□□□ -0.47
POLR1B-209ENST00000448770 C1orf147Q96MC9 270 aaPredicted RBP12.14□□□□□ -0.47
POLR1B-209ENST00000448770 NUDT22Q9BRQ3 303 aa12.14□□□□□ -0.47
POLR1B-209ENST00000448770 SLC39A1Q9NY26 324 aa12.14□□□□□ -0.47
POLR1B-209ENST00000448770 A0A1W2PPC4 97 aa12.14□□□□□ -0.47
POLR1B-209ENST00000448770 TLCD2A6NGC4 264 aa12.14□□□□□ -0.47
POLR1B-209ENST00000448770 F8VVB4 439 aa12.14□□□□□ -0.47
POLR1B-209ENST00000448770 F8VWA3 439 aa12.14□□□□□ -0.47
POLR1B-209ENST00000448770 ZNF208O43345 1280 aa12.14□□□□□ -0.47
POLR1B-209ENST00000448770 NUDT21O43809 227 aaKnown RBP12.14□□□□□ -0.47
POLR1B-209ENST00000448770 ADAP1O75689 374 aa12.14□□□□□ -0.47
POLR1B-209ENST00000448770 CCR5P51681 352 aa12.14□□□□□ -0.47
POLR1B-209ENST00000448770 CLDN6P56747 220 aa12.14□□□□□ -0.47
POLR1B-209ENST00000448770 MICBQ29980 383 aa12.14□□□□□ -0.47
POLR1B-209ENST00000448770 DEFB133Q30KQ1 61 aa12.14□□□□□ -0.47
POLR1B-209ENST00000448770 COX15Q7KZN9 410 aa12.14□□□□□ -0.47
POLR1B-209ENST00000448770 OR1M1Q8NGA1 313 aa12.14□□□□□ -0.47
POLR1B-209ENST00000448770 PAQR8Q8TEZ7 354 aa12.14□□□□□ -0.47
POLR1B-209ENST00000448770 PHB2Q99623 299 aa12.14□□□□□ -0.47
POLR1B-209ENST00000448770 PIGMQ9H3S5 423 aa12.14□□□□□ -0.47
POLR1B-209ENST00000448770 CTSFQ9UBX1 484 aa12.14□□□□□ -0.47
POLR1B-209ENST00000448770 PRELID3BQ9Y3B1 194 aa12.14□□□□□ -0.47
POLR1B-209ENST00000448770 A0A0B4J2A0 478 aa12.13□□□□□ -0.47
POLR1B-209ENST00000448770 SOCS1O15524 211 aa12.13□□□□□ -0.47
POLR1B-209ENST00000448770 H2BFMP0C1H6 154 aa12.13□□□□□ -0.47
POLR1B-209ENST00000448770 H2AFB1P0C5Y9 115 aa12.13□□□□□ -0.47
POLR1B-209ENST00000448770 ABOP16442 354 aa12.13□□□□□ -0.47
POLR1B-209ENST00000448770 PNLIPRP2P54317 469 aa12.13□□□□□ -0.47
POLR1B-209ENST00000448770 CFHR1Q03591 330 aa12.13□□□□□ -0.47
POLR1B-209ENST00000448770 MST1LQ2TV78 715 aa12.13□□□□□ -0.47
POLR1B-209ENST00000448770 TMEM244Q5VVB8 128 aa12.13□□□□□ -0.47
POLR1B-209ENST00000448770 TMEM71Q6P5X7 295 aa12.13□□□□□ -0.47
POLR1B-209ENST00000448770 ZNF704Q6ZNC4 412 aaPredicted RBP12.13□□□□□ -0.47
POLR1B-209ENST00000448770 TMEM200AQ86VY9 491 aa12.13□□□□□ -0.47
POLR1B-209ENST00000448770 HOGA1Q86XE5 327 aa12.13□□□□□ -0.47
POLR1B-209ENST00000448770 THAP6Q8TBB0 222 aa12.13□□□□□ -0.47
POLR1B-209ENST00000448770 TMED6Q8WW62 240 aa12.13□□□□□ -0.47
POLR1B-209ENST00000448770 FOXRED1Q96CU9 486 aaPredicted RBP12.13□□□□□ -0.47
POLR1B-209ENST00000448770 SLAMF6Q96DU3 332 aa12.13□□□□□ -0.47
POLR1B-209ENST00000448770 VN1R1Q9GZP7 353 aa12.13□□□□□ -0.47
POLR1B-209ENST00000448770 LPAR5Q9H1C0 372 aa12.13□□□□□ -0.47
POLR1B-209ENST00000448770 C5orf66Q9H5L9 145 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms