RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 APOC1P02654 83 aa13.98□□□□□ -0.17
SF3A1-204ENST00000447376 HPXP02790 462 aa13.98□□□□□ -0.17
SF3A1-204ENST00000447376 LCATP04180 440 aa13.98□□□□□ -0.17
SF3A1-204ENST00000447376 GIFP27352 417 aa13.98□□□□□ -0.17
SF3A1-204ENST00000447376 HSD11B1P28845 292 aa13.98□□□□□ -0.17
SF3A1-204ENST00000447376 GRB2P62993 217 aaKnown RBP13.98□□□□□ -0.17
SF3A1-204ENST00000447376 TMED1Q13445 227 aa13.98□□□□□ -0.17
SF3A1-204ENST00000447376 EIF2B1Q14232 305 aaKnown RBP13.98□□□□□ -0.17
SF3A1-204ENST00000447376 TSTQ16762 297 aaKnown RBP13.98□□□□□ -0.17
SF3A1-204ENST00000447376 AADACL4Q5VUY2 407 aa13.98□□□□□ -0.17
SF3A1-204ENST00000447376 MEDAGQ5VYS4 303 aa13.98□□□□□ -0.17
SF3A1-204ENST00000447376 DPY19L4Q7Z388 723 aa13.98□□□□□ -0.17
SF3A1-204ENST00000447376 TIGD4Q8IY51 512 aa13.98□□□□□ -0.17
SF3A1-204ENST00000447376 CMBLQ96DG6 245 aa13.98□□□□□ -0.17
SF3A1-204ENST00000447376 SLAMF6Q96DU3 332 aa13.98□□□□□ -0.17
SF3A1-204ENST00000447376 ELMOD3Q96FG2 381 aa13.98□□□□□ -0.17
SF3A1-204ENST00000447376 ZNF799Q96GE5 643 aa13.98□□□□□ -0.17
SF3A1-204ENST00000447376 MBOAT4Q96T53 435 aa13.98□□□□□ -0.17
SF3A1-204ENST00000447376 RNPEPL1Q9HAU8 725 aa13.98□□□□□ -0.17
SF3A1-204ENST00000447376 FAM118AQ9NWS6 357 aa13.98□□□□□ -0.17
SF3A1-204ENST00000447376 WARS2Q9UGM6 360 aaKnown RBP13.98□□□□□ -0.17
SF3A1-204ENST00000447376 PURGQ9UJV8 347 aaKnown RBP13.98□□□□□ -0.17
SF3A1-204ENST00000447376 SLC16A6O15403 523 aa13.97□□□□□ -0.17
SF3A1-204ENST00000447376 ACSM4P0C7M7 580 aa13.97□□□□□ -0.17
SF3A1-204ENST00000447376 KITLGP21583 273 aa13.97□□□□□ -0.17
SF3A1-204ENST00000447376 RPS27P42677 84 aaKnown RBP13.97□□□□□ -0.17
SF3A1-204ENST00000447376 MAGEB1P43366 347 aa13.97□□□□□ -0.17
SF3A1-204ENST00000447376 GPR6P46095 362 aaPredicted RBP13.97□□□□□ -0.17
SF3A1-204ENST00000447376 MMP15P51511 669 aa13.97□□□□□ -0.17
SF3A1-204ENST00000447376 CHN2P52757 468 aa13.97□□□□□ -0.17
SF3A1-204ENST00000447376 SNRPGP62308 76 aaKnown RBP13.97□□□□□ -0.17
SF3A1-204ENST00000447376 POU4F2Q12837 409 aa13.97□□□□□ -0.17
SF3A1-204ENST00000447376 PSG7Q13046 419 aa13.97□□□□□ -0.17
SF3A1-204ENST00000447376 HFEQ30201 348 aa13.97□□□□□ -0.17
SF3A1-204ENST00000447376 OGFRL1Q5TC84 451 aaPredicted RBP13.97□□□□□ -0.17
SF3A1-204ENST00000447376 TTC23Q5W5X9 447 aa13.97□□□□□ -0.17
SF3A1-204ENST00000447376 DRAM2Q6UX65 266 aa13.97□□□□□ -0.17
SF3A1-204ENST00000447376 FBXW12Q6X9E4 464 aa13.97□□□□□ -0.17
SF3A1-204ENST00000447376 RHOUQ7L0Q8 258 aa13.97□□□□□ -0.17
SF3A1-204ENST00000447376 SLC16A9Q7RTY1 509 aa13.97□□□□□ -0.17
SF3A1-204ENST00000447376 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.97□□□□□ -0.17
SF3A1-204ENST00000447376 HAVCR1Q96D42 359 aa13.97□□□□□ -0.17
SF3A1-204ENST00000447376 MAP6Q96JE9 813 aa13.97□□□□□ -0.17
SF3A1-204ENST00000447376 Q96MT0 163 aa13.97□□□□□ -0.17
SF3A1-204ENST00000447376 ZNF582Q96NG8 517 aaPredicted RBP13.97□□□□□ -0.17
SF3A1-204ENST00000447376 CNN2Q99439 309 aaKnown RBP13.97□□□□□ -0.17
SF3A1-204ENST00000447376 APOL4Q9BPW4 351 aa13.97□□□□□ -0.17
SF3A1-204ENST00000447376 C1QTNF5Q9BXJ0 243 aa13.97□□□□□ -0.17
SF3A1-204ENST00000447376 BPESC1Q9GZL8 116 aa13.97□□□□□ -0.17
SF3A1-204ENST00000447376 YIPF3Q9GZM5 350 aa13.97□□□□□ -0.17
SF3A1-204ENST00000447376 VCX3BQ9H321 246 aa13.97□□□□□ -0.17
SF3A1-204ENST00000447376 DDX28Q9NUL7 540 aaKnown RBP13.97□□□□□ -0.17
SF3A1-204ENST00000447376 LAMP5Q9UJQ1 280 aa13.97□□□□□ -0.17
SF3A1-204ENST00000447376 TMEM14AQ9Y6G1 99 aa13.97□□□□□ -0.17
SF3A1-204ENST00000447376 IGHV1-69-2A0A0G2JMI3 117 aa13.96□□□□□ -0.17
SF3A1-204ENST00000447376 VWC2LB2RUY7 222 aa13.96□□□□□ -0.17
SF3A1-204ENST00000447376 SELENOFO60613 162 aa13.96□□□□□ -0.17
SF3A1-204ENST00000447376 LYNP07948 512 aa13.96□□□□□ -0.17
SF3A1-204ENST00000447376 TNFRSF1AP19438 455 aa13.96□□□□□ -0.17
SF3A1-204ENST00000447376 HTR1FP30939 366 aa13.96□□□□□ -0.17
SF3A1-204ENST00000447376 ATP6V1E1P36543 226 aa13.96□□□□□ -0.17
SF3A1-204ENST00000447376 NAA10P41227 235 aaPredicted RBP13.96□□□□□ -0.17
SF3A1-204ENST00000447376 GZMKP49863 264 aa13.96□□□□□ -0.17
SF3A1-204ENST00000447376 TMEM33P57088 247 aa13.96□□□□□ -0.17
SF3A1-204ENST00000447376 SLC3A1Q07837 685 aa13.96□□□□□ -0.17
SF3A1-204ENST00000447376 TMEM249Q2WGJ8 235 aa13.96□□□□□ -0.17
SF3A1-204ENST00000447376 SLC25A30Q5SVS4 291 aa13.96□□□□□ -0.17
SF3A1-204ENST00000447376 MRPL21Q7Z2W9 205 aaKnown RBP13.96□□□□□ -0.17
SF3A1-204ENST00000447376 ZNF283Q8N7M2 679 aa13.96□□□□□ -0.17
SF3A1-204ENST00000447376 OTOSQ8NHW6 89 aa13.96□□□□□ -0.17
SF3A1-204ENST00000447376 THEM6Q8WUY1 208 aa13.96□□□□□ -0.17
SF3A1-204ENST00000447376 TIMD4Q96H15 378 aa13.96□□□□□ -0.17
SF3A1-204ENST00000447376 MNTQ99583 582 aa13.96□□□□□ -0.17
SF3A1-204ENST00000447376 ABHD6Q9BV23 337 aa13.96□□□□□ -0.17
SF3A1-204ENST00000447376 PNRC2Q9NPJ4 139 aaKnown RBP13.96□□□□□ -0.17
SF3A1-204ENST00000447376 HAO2Q9NYQ3 351 aa13.96□□□□□ -0.17
SF3A1-204ENST00000447376 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.96□□□□□ -0.17
SF3A1-204ENST00000447376 CCDC182A6NF36 153 aa13.95□□□□□ -0.18
SF3A1-204ENST00000447376 E9PQ18 207 aa13.95□□□□□ -0.18
SF3A1-204ENST00000447376 LYNX1G3V0Z9 82 aa13.95□□□□□ -0.18
SF3A1-204ENST00000447376 PPIHO43447 177 aaKnown RBP13.95□□□□□ -0.18
SF3A1-204ENST00000447376 CD5LO43866 347 aa13.95□□□□□ -0.18
SF3A1-204ENST00000447376 NCR1O76036 304 aa13.95□□□□□ -0.18
SF3A1-204ENST00000447376 IGHV1-46P01743 117 aa13.95□□□□□ -0.18
SF3A1-204ENST00000447376 ADH4P08319 380 aa13.95□□□□□ -0.18
SF3A1-204ENST00000447376 LYNX1P0DP58 116 aa13.95□□□□□ -0.18
SF3A1-204ENST00000447376 CRYBB2P43320 205 aa13.95□□□□□ -0.18
SF3A1-204ENST00000447376 TNFAIP6P98066 277 aaPredicted RBP13.95□□□□□ -0.18
SF3A1-204ENST00000447376 CYB5R2Q6BCY4 276 aa13.95□□□□□ -0.18
SF3A1-204ENST00000447376 KCTD18Q6PI47 426 aaPredicted RBP13.95□□□□□ -0.18
SF3A1-204ENST00000447376 USP51Q70EK9 711 aa13.95□□□□□ -0.18
SF3A1-204ENST00000447376 PGAP1Q75T13 922 aa13.95□□□□□ -0.18
SF3A1-204ENST00000447376 BCDIN3DQ7Z5W3 292 aaKnown RBP13.95□□□□□ -0.18
SF3A1-204ENST00000447376 PEG10Q86TG7 708 aaKnown RBP13.95□□□□□ -0.18
SF3A1-204ENST00000447376 DHRSXQ8N5I4 330 aa13.95□□□□□ -0.18
SF3A1-204ENST00000447376 OR2Z1Q8NG97 314 aa13.95□□□□□ -0.18
SF3A1-204ENST00000447376 ST7LQ8TDW4 575 aa13.95□□□□□ -0.18
SF3A1-204ENST00000447376 CYGBQ8WWM9 190 aa13.95□□□□□ -0.18
SF3A1-204ENST00000447376 KCNJ15Q99712 375 aa13.95□□□□□ -0.18
SF3A1-204ENST00000447376 OPA3Q9H6K4 179 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms