RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 TMEM160Q9NX00 188 aa15.91■□□□□ 0.14
HDAC4-203ENST00000445704 FAM157AC9JC47 383 aa15.9■□□□□ 0.14
HDAC4-203ENST00000445704 CLDN25C9JDP6 229 aa15.9■□□□□ 0.14
HDAC4-203ENST00000445704 HMGN1P05114 100 aa15.9■□□□□ 0.14
HDAC4-203ENST00000445704 PAICSP22234 425 aaKnown RBP15.9■□□□□ 0.14
HDAC4-203ENST00000445704 FASP25445 335 aa15.9■□□□□ 0.14
HDAC4-203ENST00000445704 CRISP1P54107 249 aa15.9■□□□□ 0.14
HDAC4-203ENST00000445704 CDH15P55291 814 aa15.9■□□□□ 0.14
HDAC4-203ENST00000445704 EIF2B1Q14232 305 aaKnown RBP15.9■□□□□ 0.14
HDAC4-203ENST00000445704 GK2Q14410 553 aaPredicted RBP15.9■□□□□ 0.14
HDAC4-203ENST00000445704 SPATC1Q76KD6 591 aa15.9■□□□□ 0.14
HDAC4-203ENST00000445704 DPY19L4Q7Z388 723 aa15.9■□□□□ 0.14
HDAC4-203ENST00000445704 CPOQ8IVL8 374 aa15.9■□□□□ 0.14
HDAC4-203ENST00000445704 TIGD4Q8IY51 512 aa15.9■□□□□ 0.14
HDAC4-203ENST00000445704 PARP8Q8N3A8 854 aa15.9■□□□□ 0.14
HDAC4-203ENST00000445704 BHLHE23Q8NDY6 225 aa15.9■□□□□ 0.14
HDAC4-203ENST00000445704 BBS1Q8NFJ9 593 aa15.9■□□□□ 0.14
HDAC4-203ENST00000445704 OR8G5Q8NG78 346 aa15.9■□□□□ 0.14
HDAC4-203ENST00000445704 DNAJC9Q8WXX5 260 aa15.9■□□□□ 0.14
HDAC4-203ENST00000445704 SPTSSAQ969W0 71 aa15.9■□□□□ 0.14
HDAC4-203ENST00000445704 ZMYND19Q96E35 227 aaPredicted RBP15.9■□□□□ 0.14
HDAC4-203ENST00000445704 AMELYQ99218 206 aa15.9■□□□□ 0.14
HDAC4-203ENST00000445704 COPS4Q9BT78 406 aa15.9■□□□□ 0.14
HDAC4-203ENST00000445704 KCNS2Q9ULS6 477 aa15.9■□□□□ 0.14
HDAC4-203ENST00000445704 WIPI2Q9Y4P8 454 aa15.9■□□□□ 0.14
HDAC4-203ENST00000445704 IQCF6A8MYZ5 107 aa15.89■□□□□ 0.13
HDAC4-203ENST00000445704 ZNF878C9JN71 531 aa15.89■□□□□ 0.13
HDAC4-203ENST00000445704 H0YL77 283 aa15.89■□□□□ 0.13
HDAC4-203ENST00000445704 MLNRO43193 412 aa15.89■□□□□ 0.13
HDAC4-203ENST00000445704 SELENOFO60613 162 aa15.89■□□□□ 0.13
HDAC4-203ENST00000445704 CIB2O75838 187 aa15.89■□□□□ 0.13
HDAC4-203ENST00000445704 SLC6A9P48067 706 aa15.89■□□□□ 0.13
HDAC4-203ENST00000445704 PRKXP51817 358 aa15.89■□□□□ 0.13
HDAC4-203ENST00000445704 LMO4P61968 165 aa15.89■□□□□ 0.13
HDAC4-203ENST00000445704 DRAM2Q6UX65 266 aa15.89■□□□□ 0.13
HDAC4-203ENST00000445704 LINC01356Q8N9X3 169 aa15.89■□□□□ 0.13
HDAC4-203ENST00000445704 OR10AD1Q8NGE0 317 aa15.89■□□□□ 0.13
HDAC4-203ENST00000445704 ITLN1Q8WWA0 313 aa15.89■□□□□ 0.13
HDAC4-203ENST00000445704 ABHD6Q9BV23 337 aa15.89■□□□□ 0.13
HDAC4-203ENST00000445704 GABARAPL1Q9H0R8 117 aa15.89■□□□□ 0.13
HDAC4-203ENST00000445704 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.89■□□□□ 0.133e-9■■□□□ 13.9
HDAC4-203ENST00000445704 KIAA1324LA8MWY0 1029 aaPredicted RBP15.88■□□□□ 0.13
HDAC4-203ENST00000445704 G3V2T6 193 aa15.88■□□□□ 0.13
HDAC4-203ENST00000445704 SLC2A1P11166 492 aa15.88■□□□□ 0.13
HDAC4-203ENST00000445704 SLC2A5P22732 501 aa15.88■□□□□ 0.13
HDAC4-203ENST00000445704 PTGES3Q15185 160 aaKnown RBP15.88■□□□□ 0.13
HDAC4-203ENST00000445704 CHRFAM7AQ494W8 412 aa15.88■□□□□ 0.13
HDAC4-203ENST00000445704 CCDC121Q6ZUS5 278 aa15.88■□□□□ 0.13
HDAC4-203ENST00000445704 IL17RELQ6ZVW7 336 aa15.88■□□□□ 0.13
HDAC4-203ENST00000445704 ZNF283Q8N7M2 679 aa15.88■□□□□ 0.13
HDAC4-203ENST00000445704 OR2AE1Q8NHA4 323 aa15.88■□□□□ 0.13
HDAC4-203ENST00000445704 PLEKHA8Q96JA3 519 aa15.88■□□□□ 0.13
HDAC4-203ENST00000445704 ZNF582Q96NG8 517 aaPredicted RBP15.88■□□□□ 0.13
HDAC4-203ENST00000445704 OR2V2Q96R30 315 aa15.88■□□□□ 0.13
HDAC4-203ENST00000445704 KCNJ15Q99712 375 aa15.88■□□□□ 0.13
HDAC4-203ENST00000445704 SLC30A2Q9BRI3 323 aa15.88■□□□□ 0.13
HDAC4-203ENST00000445704 KRT84Q9NSB2 600 aa15.88■□□□□ 0.13
HDAC4-203ENST00000445704 TVP23BQ9NYZ1 205 aa15.88■□□□□ 0.13
HDAC4-203ENST00000445704 IL19Q9UHD0 177 aa15.88■□□□□ 0.13
HDAC4-203ENST00000445704 PRODHO43272 600 aa15.87■□□□□ 0.13
HDAC4-203ENST00000445704 TNFSF4P23510 183 aa15.87■□□□□ 0.13
HDAC4-203ENST00000445704 EPHA2P29317 976 aa15.87■□□□□ 0.13
HDAC4-203ENST00000445704 ZNF92Q03936 586 aa15.87■□□□□ 0.13
HDAC4-203ENST00000445704 MALLQ13021 153 aa15.87■□□□□ 0.13
HDAC4-203ENST00000445704 TAF13Q15543 124 aa15.87■□□□□ 0.13
HDAC4-203ENST00000445704 KLHL12Q53G59 568 aa15.87■□□□□ 0.13
HDAC4-203ENST00000445704 GLYATL3Q5SZD4 288 aa15.87■□□□□ 0.13
HDAC4-203ENST00000445704 KDM4DQ6B0I6 523 aa15.87■□□□□ 0.13
HDAC4-203ENST00000445704 CXXC5Q7LFL8 322 aaKnown RBP15.87■□□□□ 0.13
HDAC4-203ENST00000445704 RNF133Q8WVZ7 376 aa15.87■□□□□ 0.13
HDAC4-203ENST00000445704 SEMA6AQ9H2E6 1030 aa15.87■□□□□ 0.13
HDAC4-203ENST00000445704 TMEM106BQ9NUM4 274 aa15.87■□□□□ 0.13
HDAC4-203ENST00000445704 CDC42EP3Q9UKI2 254 aa15.87■□□□□ 0.13
HDAC4-203ENST00000445704 A0A1B0GWJ7 208 aa15.86■□□□□ 0.13
HDAC4-203ENST00000445704 M0R129 80 aa15.86■□□□□ 0.13
HDAC4-203ENST00000445704 FCGR1AP12314 374 aa15.86■□□□□ 0.13
HDAC4-203ENST00000445704 SELEP16581 610 aa15.86■□□□□ 0.13
HDAC4-203ENST00000445704 NAA10P41227 235 aaPredicted RBP15.86■□□□□ 0.13
HDAC4-203ENST00000445704 ESRRGP62508 458 aa15.86■□□□□ 0.13
HDAC4-203ENST00000445704 SNAPC1Q16533 368 aa15.86■□□□□ 0.13
HDAC4-203ENST00000445704 FAM120AOSQ5T036 256 aa15.86■□□□□ 0.13
HDAC4-203ENST00000445704 PGAP1Q75T13 922 aa15.86■□□□□ 0.13
HDAC4-203ENST00000445704 ZNF771Q7L3S4 317 aaPredicted RBP15.86■□□□□ 0.13
HDAC4-203ENST00000445704 SHFQ7M4L6 423 aa15.86■□□□□ 0.13
HDAC4-203ENST00000445704 MRPL21Q7Z2W9 205 aaKnown RBP15.86■□□□□ 0.13
HDAC4-203ENST00000445704 ZDHHC13Q8IUH4 622 aa15.86■□□□□ 0.13
HDAC4-203ENST00000445704 OR13G1Q8NGZ3 307 aa15.86■□□□□ 0.13
HDAC4-203ENST00000445704 PYDC1Q8WXC3 89 aa15.86■□□□□ 0.13
HDAC4-203ENST00000445704 RAB1CQ92928 201 aa15.86■□□□□ 0.13
HDAC4-203ENST00000445704 TIMD4Q96H15 378 aa15.86■□□□□ 0.13
HDAC4-203ENST00000445704 MEGF10Q96KG7 1140 aa15.86■□□□□ 0.13
HDAC4-203ENST00000445704 ZNF665Q9H7R5 613 aa15.86■□□□□ 0.13
HDAC4-203ENST00000445704 LPAR2Q9HBW0 351 aa15.86■□□□□ 0.13
HDAC4-203ENST00000445704 TMEFF2Q9UIK5 374 aaPredicted RBP15.86■□□□□ 0.13
HDAC4-203ENST00000445704 KLHDC2Q9Y2U9 406 aa15.86■□□□□ 0.13
HDAC4-203ENST00000445704 JMJD1CQ15652 2540 aa15.86■□□□□ 0.13
HDAC4-203ENST00000445704 IGHV3-64DA0A0J9YX35 117 aa15.85■□□□□ 0.13
HDAC4-203ENST00000445704 CCDC182A6NF36 153 aa15.85■□□□□ 0.13
HDAC4-203ENST00000445704 B4DSR2 109 aa15.85■□□□□ 0.13
HDAC4-203ENST00000445704 F5H5P2 479 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms