RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 A8MVM7 634 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 HSPB6O14558 160 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 MRPS12O15235 138 aaKnown RBP3.37□□□□□ -1.87
UBR3-206ENST00000444475 KRT33AO76009 404 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 SLC22A5O76082 557 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 LRATO95237 230 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 SLC25A27O95847 323 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 TBX6O95947 436 aaPredicted RBP3.37□□□□□ -1.87
UBR3-206ENST00000444475 CRYAAP02489 173 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 IFNA4P05014 189 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 NPSP0C0P6 89 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 F2RP25116 425 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 YAP1P46937 504 aaKnown RBP3.37□□□□□ -1.87
UBR3-206ENST00000444475 CDKN2DP55273 166 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 CDH12P55289 794 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 B3GALT5-AS1P59052 145 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 UNC119Q13432 240 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 CALCRLQ16602 461 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 ZNF284Q2VY69 593 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 GPRC6AQ5T6X5 926 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 WDR74Q6RFH5 385 aaPredicted RBP3.37□□□□□ -1.87
UBR3-206ENST00000444475 STAC2Q6ZMT1 411 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 COQ8AQ8NI60 647 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 FNDC8Q8TC99 324 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 IRF7Q92985 503 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 UCN3Q969E3 161 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 PNPLA2Q96AD5 504 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 C12orf43Q96C57 262 aaKnown RBP3.37□□□□□ -1.87
UBR3-206ENST00000444475 CPNE2Q96FN4 548 aaPredicted RBP3.37□□□□□ -1.87
UBR3-206ENST00000444475 MED8Q96G25 268 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 EPYCQ99645 322 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 NPFFR1Q9GZQ6 430 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 ZNF385DQ9H6B1 395 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 C19orf73Q9NVV2 129 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 DDIT4Q9NX09 232 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 GPR160Q9UJ42 338 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 WDR81Q562E7 1941 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 PXDNLA1KZ92 1463 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 PTPRJQ12913 1337 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 PLCH1Q4KWH8 1693 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 LYPD3O95274 346 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 FAM228BP0C875 321 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 FPR3P25089 353 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 FASP25445 335 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 RFC3P40938 356 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 PSMD8P48556 350 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 OR1D5P58170 312 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 TAS2R38P59533 333 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 RIPPLY1Q0D2K3 151 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 GGTLC2Q14390 218 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 TRIP6Q15654 476 aaKnown RBP3.37□□□□□ -1.87
UBR3-206ENST00000444475 PRSS8Q16651 343 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 TTLL9Q3SXZ7 439 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 TMEM78Q5T7P6 136 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 SMARCD3Q6STE5 483 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 PARM1Q6UWI2 310 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 ZNF547Q8IVP9 402 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 SPICQ8N5J4 248 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 KLHDC1Q8N7A1 406 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 OR56B4Q8NH76 319 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 Q8WTZ3 238 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 IL17FQ96PD4 163 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 LPAR4Q99677 370 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 NXF5Q9H1B4 397 aaKnown RBP3.37□□□□□ -1.87
UBR3-206ENST00000444475 ACOT13Q9NPJ3 140 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 BIN3Q9NQY0 253 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 PRO0628Q9UI54 55 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 COPS3Q9UNS2 423 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 CHST2Q9Y4C5 530 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 TMEM2Q9UHN6 1383 aa3.37□□□□□ -1.87
UBR3-206ENST00000444475 C15orf61A6NNL5 157 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 RNF212BA8MTL3 300 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 GAPDHSO14556 408 aaPredicted RBP3.36□□□□□ -1.87
UBR3-206ENST00000444475 TAAR5O14804 337 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 CCDC22O60826 627 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 ANXA9O76027 345 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 APOHP02749 345 aaPredicted RBP3.36□□□□□ -1.87
UBR3-206ENST00000444475 ESDP10768 282 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 HTR1DP28221 377 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 TMPRSS3P57727 454 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 CD47Q08722 323 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 TFDP2Q14188 446 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 EDDM3AQ14507 147 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 HIST3H3Q16695 136 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 PLPPR5Q32ZL2 321 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 UBE2UQ5VVX9 321 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 C1QL3Q5VWW1 255 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 HAGHLQ6PII5 290 aaPredicted RBP3.36□□□□□ -1.87
UBR3-206ENST00000444475 ATRAIDQ6UW56 229 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 TMEM205Q6UW68 189 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 CA13Q8N1Q1 262 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 CADM2Q8N3J6 435 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 PGBD5Q8N414 524 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 ZNF614Q8N883 585 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 TEX45Q8NA69 505 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 OR14K1Q8NGZ2 314 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 CSF3RQ99062 836 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 PSG8Q9UQ74 426 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 XRN1Q8IZH2 1706 aaKnown RBP3.36□□□□□ -1.87
UBR3-206ENST00000444475 MYH14Q7Z406 1995 aaKnown RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms