RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 ZNF670-ZNF695F2Z2N8 137 aa10.54□□□□□ -0.72
USP1-203ENST00000442679 TIMM8AO60220 97 aaPredicted RBP10.54□□□□□ -0.72
USP1-203ENST00000442679 APOL3O95236 402 aa10.54□□□□□ -0.72
USP1-203ENST00000442679 MT-ND5P03915 603 aa10.54□□□□□ -0.72
USP1-203ENST00000442679 SLC2A1P11166 492 aa10.54□□□□□ -0.72
USP1-203ENST00000442679 RAC2P15153 192 aa10.54□□□□□ -0.72
USP1-203ENST00000442679 GABRB1P18505 474 aa10.54□□□□□ -0.72
USP1-203ENST00000442679 CX3CR1P49238 355 aa10.54□□□□□ -0.72
USP1-203ENST00000442679 POU4F2Q12837 409 aa10.54□□□□□ -0.72
USP1-203ENST00000442679 TMEM255AQ5JRV8 349 aa10.54□□□□□ -0.72
USP1-203ENST00000442679 LRRN1Q6UXK5 716 aa10.54□□□□□ -0.72
USP1-203ENST00000442679 FBXW12Q6X9E4 464 aa10.54□□□□□ -0.72
USP1-203ENST00000442679 KRT77Q7Z794 578 aa10.54□□□□□ -0.72
USP1-203ENST00000442679 DHRSXQ8N5I4 330 aa10.54□□□□□ -0.72
USP1-203ENST00000442679 SNX33Q8WV41 574 aa10.54□□□□□ -0.72
USP1-203ENST00000442679 NEU4Q8WWR8 484 aaPredicted RBP10.54□□□□□ -0.72
USP1-203ENST00000442679 Q96MT0 163 aa10.54□□□□□ -0.72
USP1-203ENST00000442679 MNTQ99583 582 aa10.54□□□□□ -0.72
USP1-203ENST00000442679 TPK1Q9H3S4 243 aa10.54□□□□□ -0.72
USP1-203ENST00000442679 SP140LQ9H930 580 aa10.54□□□□□ -0.72
USP1-203ENST00000442679 PURGQ9UJV8 347 aaKnown RBP10.54□□□□□ -0.72
USP1-203ENST00000442679 COPS3Q9UNS2 423 aa10.54□□□□□ -0.72
USP1-203ENST00000442679 MYO9AB2RTY4 2548 aa10.53□□□□□ -0.72
USP1-203ENST00000442679 PLSCR5A0PG75 271 aa10.53□□□□□ -0.72
USP1-203ENST00000442679 C17orf100A8MU93 164 aa10.53□□□□□ -0.72
USP1-203ENST00000442679 PSMD9O00233 223 aa10.53□□□□□ -0.72
USP1-203ENST00000442679 PHYHO14832 338 aa10.53□□□□□ -0.72
USP1-203ENST00000442679 LY6HO94772 140 aa10.53□□□□□ -0.72
USP1-203ENST00000442679 ANXA2P07355 339 aaKnown RBP10.53□□□□□ -0.72
USP1-203ENST00000442679 OR2T7P0C7T2 308 aa10.53□□□□□ -0.72
USP1-203ENST00000442679 KITLGP21583 273 aa10.53□□□□□ -0.72
USP1-203ENST00000442679 MTNR1AP48039 350 aa10.53□□□□□ -0.72
USP1-203ENST00000442679 ZNF81P51508 661 aa10.53□□□□□ -0.72
USP1-203ENST00000442679 MMP15P51511 669 aa10.53□□□□□ -0.72
USP1-203ENST00000442679 ADARB1P78563 741 aaKnown RBP10.53□□□□□ -0.72
USP1-203ENST00000442679 IL5RAQ01344 420 aa10.53□□□□□ -0.72
USP1-203ENST00000442679 ROM1Q03395 351 aa10.53□□□□□ -0.72
USP1-203ENST00000442679 GK2Q14410 553 aaPredicted RBP10.53□□□□□ -0.72
USP1-203ENST00000442679 CLEC12BQ2HXU8 276 aa10.53□□□□□ -0.72
USP1-203ENST00000442679 SNAI3Q3KNW1 292 aa10.53□□□□□ -0.72
USP1-203ENST00000442679 OR2T2Q6IF00 324 aa10.53□□□□□ -0.72
USP1-203ENST00000442679 DEGS2Q6QHC5 323 aa10.53□□□□□ -0.72
USP1-203ENST00000442679 ZNF322Q6U7Q0 402 aaPredicted RBP10.53□□□□□ -0.72
USP1-203ENST00000442679 USP51Q70EK9 711 aa10.53□□□□□ -0.72
USP1-203ENST00000442679 TGIF2LYQ8IUE0 185 aa10.53□□□□□ -0.72
USP1-203ENST00000442679 RFLNBQ8N5W9 214 aa10.53□□□□□ -0.72
USP1-203ENST00000442679 OR10H4Q8NGA5 316 aa10.53□□□□□ -0.72
USP1-203ENST00000442679 OR2T27Q8NH04 317 aa10.53□□□□□ -0.72
USP1-203ENST00000442679 NRG4Q8WWG1 115 aa10.53□□□□□ -0.72
USP1-203ENST00000442679 GTF3AQ92664 365 aaKnown RBP10.53□□□□□ -0.72
USP1-203ENST00000442679 RNFT2Q96EX2 444 aa10.53□□□□□ -0.72
USP1-203ENST00000442679 Q96MF0 132 aa10.53□□□□□ -0.72
USP1-203ENST00000442679 TBX5Q99593 518 aa10.53□□□□□ -0.72
USP1-203ENST00000442679 MROQ9BYG7 248 aa10.53□□□□□ -0.72
USP1-203ENST00000442679 TTTY10Q9BZA0 68 aa10.53□□□□□ -0.72
USP1-203ENST00000442679 NIPAL2Q9H841 368 aa10.53□□□□□ -0.72
USP1-203ENST00000442679 BRD7Q9NPI1 651 aa10.53□□□□□ -0.72
USP1-203ENST00000442679 CYSLTR2Q9NS75 346 aa10.53□□□□□ -0.72
USP1-203ENST00000442679 LRP12Q9Y561 859 aa10.53□□□□□ -0.72
USP1-203ENST00000442679 CREBBPQ92793 2442 aa10.53□□□□□ -0.72
USP1-203ENST00000442679 C5orf63A6NC05 138 aa10.52□□□□□ -0.73
USP1-203ENST00000442679 PRR32B1ATL7 298 aa10.52□□□□□ -0.73
USP1-203ENST00000442679 TBX1O43435 398 aa10.52□□□□□ -0.73
USP1-203ENST00000442679 SPRY3O43610 288 aa10.52□□□□□ -0.73
USP1-203ENST00000442679 ZNF254O75437 659 aa10.52□□□□□ -0.73
USP1-203ENST00000442679 CLIC3O95833 236 aa10.52□□□□□ -0.73
USP1-203ENST00000442679 SELEP16581 610 aa10.52□□□□□ -0.73
USP1-203ENST00000442679 ANOS1P23352 680 aa10.52□□□□□ -0.73
USP1-203ENST00000442679 LIPAP38571 399 aa10.52□□□□□ -0.73
USP1-203ENST00000442679 CAPGP40121 348 aa10.52□□□□□ -0.73
USP1-203ENST00000442679 ZNF121P58317 390 aaPredicted RBP10.52□□□□□ -0.73
USP1-203ENST00000442679 CXCR4P61073 352 aa10.52□□□□□ -0.73
USP1-203ENST00000442679 ZNF92Q03936 586 aa10.52□□□□□ -0.73
USP1-203ENST00000442679 PCGF3Q3KNV8 242 aa10.52□□□□□ -0.73
USP1-203ENST00000442679 GLYATL3Q5SZD4 288 aa10.52□□□□□ -0.73
USP1-203ENST00000442679 ZNF691Q5VV52 312 aa10.52□□□□□ -0.73
USP1-203ENST00000442679 FAM57BQ71RH2 274 aa10.52□□□□□ -0.73
USP1-203ENST00000442679 PGAP1Q75T13 922 aa10.52□□□□□ -0.73
USP1-203ENST00000442679 ZNF679Q8IYX0 411 aa10.52□□□□□ -0.73
USP1-203ENST00000442679 OR5AS1Q8N127 324 aa10.52□□□□□ -0.73
USP1-203ENST00000442679 OR2AE1Q8NHA4 323 aa10.52□□□□□ -0.73
USP1-203ENST00000442679 PGAM5Q96HS1 289 aa10.52□□□□□ -0.73
USP1-203ENST00000442679 OR8B4Q96RC9 309 aa10.52□□□□□ -0.73
USP1-203ENST00000442679 ADI1Q9BV57 179 aa10.52□□□□□ -0.73
USP1-203ENST00000442679 MSL2Q9HCI7 577 aa10.52□□□□□ -0.73
USP1-203ENST00000442679 CGGBP1Q9UFW8 167 aaPredicted RBP10.52□□□□□ -0.73
USP1-203ENST00000442679 IKZF2Q9UKS7 526 aa10.52□□□□□ -0.73
USP1-203ENST00000442679 A0A1W2PQL4 384 aaPredicted RBP10.51□□□□□ -0.73
USP1-203ENST00000442679 ZSCAN5BA6NJL1 495 aa10.51□□□□□ -0.73
USP1-203ENST00000442679 H0YAE9 185 aa10.51□□□□□ -0.73
USP1-203ENST00000442679 MAGEB4O15481 346 aaPredicted RBP10.51□□□□□ -0.73
USP1-203ENST00000442679 DAOP14920 347 aa10.51□□□□□ -0.73
USP1-203ENST00000442679 MAGEB1P43366 347 aa10.51□□□□□ -0.73
USP1-203ENST00000442679 RIDAP52758 137 aaKnown RBP10.51□□□□□ -0.73
USP1-203ENST00000442679 PRSS12P56730 875 aa10.51□□□□□ -0.73
USP1-203ENST00000442679 DSCR9P59020 149 aa10.51□□□□□ -0.73
USP1-203ENST00000442679 CCL8P80075 99 aa10.51□□□□□ -0.73
USP1-203ENST00000442679 EGR3Q06889 387 aa10.51□□□□□ -0.73
USP1-203ENST00000442679 CDK5R2Q13319 367 aa10.51□□□□□ -0.73
USP1-203ENST00000442679 IL18R1Q13478 541 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms