RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 WIF1Q9Y5W5 379 aa18.15■□□□□ 0.5
SHOX2-203ENST00000441443 PMS2P1A4D2B8 440 aa18.15■□□□□ 0.5
SHOX2-203ENST00000441443 FCGR3AP08637 254 aa18.15■□□□□ 0.5
SHOX2-203ENST00000441443 CD226Q15762 336 aa18.15■□□□□ 0.5
SHOX2-203ENST00000441443 METTL1Q9UBP6 276 aaKnown RBP18.15■□□□□ 0.5
SHOX2-203ENST00000441443 ZNF107Q9UII5 783 aaPredicted RBP18.15■□□□□ 0.5
SHOX2-203ENST00000441443 PRAMEF26H0Y7S4 382 aa18.14■□□□□ 0.49
SHOX2-203ENST00000441443 OR6A2O95222 327 aa18.14■□□□□ 0.49
SHOX2-203ENST00000441443 IGFBP3P17936 291 aaPredicted RBP18.14■□□□□ 0.49
SHOX2-203ENST00000441443 C9orf152Q5JTZ5 239 aa18.14■□□□□ 0.49
SHOX2-203ENST00000441443 THRSPQ92748 146 aa18.14■□□□□ 0.49
SHOX2-203ENST00000441443 SAT2Q96F10 170 aaPredicted RBP18.14■□□□□ 0.49
SHOX2-203ENST00000441443 ZFYVE21Q9BQ24 234 aa18.14■□□□□ 0.49
SHOX2-203ENST00000441443 Q9N2J8 555 aa18.14■□□□□ 0.49
SHOX2-203ENST00000441443 OR8U9P0C7N5 309 aa18.14■□□□□ 0.49
SHOX2-203ENST00000441443 SLC35E2P0CK97 266 aa18.14■□□□□ 0.49
SHOX2-203ENST00000441443 CX3CR1P49238 355 aa18.14■□□□□ 0.49
SHOX2-203ENST00000441443 ADAM5Q6NVV9 412 aa18.14■□□□□ 0.49
SHOX2-203ENST00000441443 ATG4DQ86TL0 474 aaPredicted RBP18.14■□□□□ 0.49
SHOX2-203ENST00000441443 BCORP1Q8N888 145 aa18.14■□□□□ 0.49
SHOX2-203ENST00000441443 OR8U1Q8NH10 309 aa18.14■□□□□ 0.49
SHOX2-203ENST00000441443 HOXB13Q92826 284 aaPredicted RBP18.14■□□□□ 0.49
SHOX2-203ENST00000441443 CYYR1Q96J86 154 aa18.14■□□□□ 0.49
SHOX2-203ENST00000441443 TAF9BQ9HBM6 251 aa18.14■□□□□ 0.49
SHOX2-203ENST00000441443 SOX1O00570 391 aaPredicted RBP18.13■□□□□ 0.49
SHOX2-203ENST00000441443 TXNDC12O95881 172 aa18.13■□□□□ 0.49
SHOX2-203ENST00000441443 MT-ND4LP03901 98 aa18.13■□□□□ 0.49
SHOX2-203ENST00000441443 ACKR3P25106 362 aa18.13■□□□□ 0.49
SHOX2-203ENST00000441443 TEX30Q5JUR7 227 aa18.13■□□□□ 0.49
SHOX2-203ENST00000441443 NCMAPQ5T1S8 102 aa18.13■□□□□ 0.49
SHOX2-203ENST00000441443 FDX2Q6P4F2 183 aa18.13■□□□□ 0.49
SHOX2-203ENST00000441443 OR2I1PQ8NGU4 316 aa18.13■□□□□ 0.49
SHOX2-203ENST00000441443 ZNF775Q96BV0 537 aaPredicted RBP18.13■□□□□ 0.49
SHOX2-203ENST00000441443 WDR77Q9BQA1 342 aaPredicted RBP18.13■□□□□ 0.49
SHOX2-203ENST00000441443 GSKIPQ9P0R6 139 aa18.13■□□□□ 0.49
SHOX2-203ENST00000441443 PCOLCE2Q9UKZ9 415 aa18.13■□□□□ 0.49
SHOX2-203ENST00000441443 HEBP2Q9Y5Z4 205 aa18.13■□□□□ 0.49
SHOX2-203ENST00000441443 METTL21EPA6NDL7 271 aa18.13■□□□□ 0.49
SHOX2-203ENST00000441443 MFNGO00587 321 aa18.13■□□□□ 0.49
SHOX2-203ENST00000441443 CTSBP07858 339 aa18.13■□□□□ 0.49
SHOX2-203ENST00000441443 CT45A8P0DMV1 189 aa18.13■□□□□ 0.49
SHOX2-203ENST00000441443 CT45A9P0DMV2 189 aa18.13■□□□□ 0.49
SHOX2-203ENST00000441443 NPY4RP50391 375 aa18.13■□□□□ 0.49
SHOX2-203ENST00000441443 CYCSP99999 105 aaKnown RBP18.13■□□□□ 0.49
SHOX2-203ENST00000441443 RAB32Q13637 225 aa18.13■□□□□ 0.49
SHOX2-203ENST00000441443 ERV3-1Q14264 604 aa18.13■□□□□ 0.49
SHOX2-203ENST00000441443 RNF212Q495C1 297 aa18.13■□□□□ 0.49
SHOX2-203ENST00000441443 AWAT1Q58HT5 328 aa18.13■□□□□ 0.49
SHOX2-203ENST00000441443 CT45A2Q5DJT8 189 aa18.13■□□□□ 0.49
SHOX2-203ENST00000441443 FAHD2BQ6P2I3 314 aaPredicted RBP18.13■□□□□ 0.49
SHOX2-203ENST00000441443 TAAR8Q969N4 342 aa18.13■□□□□ 0.49
SHOX2-203ENST00000441443 ELSPBP1Q96BH3 223 aa18.13■□□□□ 0.49
SHOX2-203ENST00000441443 MRPL38Q96DV4 380 aaKnown RBP18.13■□□□□ 0.49
SHOX2-203ENST00000441443 FAHD2AQ96GK7 314 aa18.13■□□□□ 0.49
SHOX2-203ENST00000441443 TCEAL7Q9BRU2 100 aa18.13■□□□□ 0.49
SHOX2-203ENST00000441443 EMC9Q9Y3B6 208 aa18.13■□□□□ 0.49
SHOX2-203ENST00000441443 TGFBR3LH3BV60 316 aa18.12■□□□□ 0.49
SHOX2-203ENST00000441443 PHYHO14832 338 aa18.12■□□□□ 0.49
SHOX2-203ENST00000441443 HCRTR1O43613 425 aa18.12■□□□□ 0.49
SHOX2-203ENST00000441443 CTHP32929 405 aa18.12■□□□□ 0.49
SHOX2-203ENST00000441443 S100A10P60903 97 aa18.12■□□□□ 0.49
SHOX2-203ENST00000441443 TMEM244Q5VVB8 128 aa18.12■□□□□ 0.49
SHOX2-203ENST00000441443 WBP2NLQ6ICG8 309 aa18.12■□□□□ 0.49
SHOX2-203ENST00000441443 SLC18B1Q6NT16 456 aa18.12■□□□□ 0.49
SHOX2-203ENST00000441443 PPP1R3BQ86XI6 285 aa18.12■□□□□ 0.49
SHOX2-203ENST00000441443 OR9A4Q8NGU2 314 aa18.12■□□□□ 0.49
SHOX2-203ENST00000441443 SLC22A18Q96BI1 424 aa18.12■□□□□ 0.49
SHOX2-203ENST00000441443 INTS12Q96CB8 462 aaKnown RBP18.12■□□□□ 0.49
SHOX2-203ENST00000441443 SLC5A7Q9GZV3 580 aa18.12■□□□□ 0.49
SHOX2-203ENST00000441443 PLA2G2EQ9NZK7 142 aa18.12■□□□□ 0.49
SHOX2-203ENST00000441443 FAM157AC9JC47 383 aa18.12■□□□□ 0.49
SHOX2-203ENST00000441443 SLC16A7O60669 478 aa18.12■□□□□ 0.49
SHOX2-203ENST00000441443 SLC6A9P48067 706 aa18.12■□□□□ 0.49
SHOX2-203ENST00000441443 C1QL3Q5VWW1 255 aa18.12■□□□□ 0.49
SHOX2-203ENST00000441443 PRSS54Q6PEW0 395 aa18.12■□□□□ 0.49
SHOX2-203ENST00000441443 TAF8Q7Z7C8 310 aa18.12■□□□□ 0.49
SHOX2-203ENST00000441443 OR10C1Q96KK4 312 aa18.12■□□□□ 0.49
SHOX2-203ENST00000441443 CNTD2Q9H8S5 307 aa18.12■□□□□ 0.49
SHOX2-203ENST00000441443 PDE7BQ9NP56 450 aa18.12■□□□□ 0.49
SHOX2-203ENST00000441443 MRPL22Q9NWU5 206 aaKnown RBP18.12■□□□□ 0.49
SHOX2-203ENST00000441443 LRP12Q9Y561 859 aa18.12■□□□□ 0.49
SHOX2-203ENST00000441443 C7orf77A4D0Y5 90 aa18.12■□□□□ 0.49
SHOX2-203ENST00000441443 M0R036 132 aa18.12■□□□□ 0.49
SHOX2-203ENST00000441443 XKRYO14609 159 aa18.12■□□□□ 0.49
SHOX2-203ENST00000441443 PRF1P14222 555 aa18.12■□□□□ 0.49
SHOX2-203ENST00000441443 PHF19Q5T6S3 580 aa18.12■□□□□ 0.49
SHOX2-203ENST00000441443 FAM24BQ8N5W8 94 aa18.12■□□□□ 0.49
SHOX2-203ENST00000441443 BMFQ96LC9 184 aa18.12■□□□□ 0.49
SHOX2-203ENST00000441443 WDR92Q96MX6 357 aa18.12■□□□□ 0.49
SHOX2-203ENST00000441443 G6PC3Q9BUM1 346 aa18.12■□□□□ 0.49
SHOX2-203ENST00000441443 TCEAL2Q9H3H9 227 aaPredicted RBP18.12■□□□□ 0.49
SHOX2-203ENST00000441443 ASH2LQ9UBL3 628 aa18.12■□□□□ 0.49
SHOX2-203ENST00000441443 TIMM10BQ9Y5J6 103 aa18.12■□□□□ 0.49
SHOX2-203ENST00000441443 MPZL1O95297 269 aa18.11■□□□□ 0.49
SHOX2-203ENST00000441443 ARG1P05089 322 aa18.11■□□□□ 0.49
SHOX2-203ENST00000441443 RIDAP52758 137 aaKnown RBP18.11■□□□□ 0.49
SHOX2-203ENST00000441443 BTNL8Q6UX41 500 aa18.11■□□□□ 0.49
SHOX2-203ENST00000441443 Q6ZRG5 221 aa18.11■□□□□ 0.49
SHOX2-203ENST00000441443 MRGPRX1Q96LB2 322 aa18.11■□□□□ 0.49
SHOX2-203ENST00000441443 A0A0A6YYH2 397 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms