RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 CDK2P24941 298 aa12.61□□□□□ -0.39
LIMD1-202ENST00000440097 MPGP29372 298 aa12.61□□□□□ -0.39
LIMD1-202ENST00000440097 ART1P52961 327 aa12.61□□□□□ -0.39
LIMD1-202ENST00000440097 OR2G2Q8NGZ5 317 aa12.61□□□□□ -0.39
LIMD1-202ENST00000440097 POTEKPQ9BYX7 375 aa12.61□□□□□ -0.39
LIMD1-202ENST00000440097 IGHMP01871 453 aa12.61□□□□□ -0.39
LIMD1-202ENST00000440097 HOXA1P49639 335 aaPredicted RBP12.61□□□□□ -0.39
LIMD1-202ENST00000440097 SORDQ00796 357 aa12.61□□□□□ -0.39
LIMD1-202ENST00000440097 FGL1Q08830 312 aa12.61□□□□□ -0.39
LIMD1-202ENST00000440097 Q499Y3 187 aa12.61□□□□□ -0.39
LIMD1-202ENST00000440097 CARD17Q5XLA6 110 aa12.61□□□□□ -0.39
LIMD1-202ENST00000440097 KCTD18Q6PI47 426 aaPredicted RBP12.61□□□□□ -0.39
LIMD1-202ENST00000440097 TIPARPQ7Z3E1 657 aaKnown RBP12.61□□□□□ -0.39
LIMD1-202ENST00000440097 LINC00346Q8IVM7 164 aa12.61□□□□□ -0.39
LIMD1-202ENST00000440097 UEVLDQ8IX04 471 aa12.61□□□□□ -0.39
LIMD1-202ENST00000440097 OR2AK2Q8NG84 335 aa12.61□□□□□ -0.39
LIMD1-202ENST00000440097 OR6K3Q8NGY3 331 aa12.61□□□□□ -0.39
LIMD1-202ENST00000440097 CT55Q8WUE5 264 aa12.61□□□□□ -0.39
LIMD1-202ENST00000440097 RNF138Q8WVD3 245 aa12.61□□□□□ -0.39
LIMD1-202ENST00000440097 TSEN15Q8WW01 171 aaKnown RBP12.61□□□□□ -0.39
LIMD1-202ENST00000440097 RGP1Q92546 391 aaPredicted RBP12.61□□□□□ -0.39
LIMD1-202ENST00000440097 NARS2Q96I59 477 aaKnown RBP12.61□□□□□ -0.39
LIMD1-202ENST00000440097 SLC25A32Q9H2D1 315 aa12.61□□□□□ -0.39
LIMD1-202ENST00000440097 TAS2R3Q9NYW6 316 aa12.61□□□□□ -0.39
LIMD1-202ENST00000440097 ACOT7O00154 380 aa12.6□□□□□ -0.39
LIMD1-202ENST00000440097 SULT1B1O43704 296 aa12.6□□□□□ -0.39
LIMD1-202ENST00000440097 ABHD16AO95870 558 aa12.6□□□□□ -0.39
LIMD1-202ENST00000440097 EIF1AXP47813 144 aaKnown RBP12.6□□□□□ -0.39
LIMD1-202ENST00000440097 GMFBP60983 142 aa12.6□□□□□ -0.39
LIMD1-202ENST00000440097 ELP2Q6IA86 826 aa12.6□□□□□ -0.39
LIMD1-202ENST00000440097 DBX2Q6ZNG2 339 aa12.6□□□□□ -0.39
LIMD1-202ENST00000440097 MUC20Q8N307 709 aaPredicted RBP12.6□□□□□ -0.39
LIMD1-202ENST00000440097 OR6S1Q8NH40 331 aa12.6□□□□□ -0.39
LIMD1-202ENST00000440097 UQCC2Q9BRT2 126 aa12.6□□□□□ -0.39
LIMD1-202ENST00000440097 OR5V1Q9UGF6 321 aa12.6□□□□□ -0.39
LIMD1-202ENST00000440097 DKKL1Q9UK85 242 aa12.6□□□□□ -0.39
LIMD1-202ENST00000440097 IGLV3-32A0A0A0MS00 114 aa12.6□□□□□ -0.39
LIMD1-202ENST00000440097 H7C2Y5 167 aa12.6□□□□□ -0.39
LIMD1-202ENST00000440097 SULT2B1O00204 365 aa12.6□□□□□ -0.39
LIMD1-202ENST00000440097 EIF1AYO14602 144 aaKnown RBP12.6□□□□□ -0.39
LIMD1-202ENST00000440097 ACHEP22303 614 aa12.6□□□□□ -0.39
LIMD1-202ENST00000440097 MAPK3P27361 379 aaPredicted RBP12.6□□□□□ -0.39
LIMD1-202ENST00000440097 EIF1P41567 113 aaKnown RBP12.6□□□□□ -0.39
LIMD1-202ENST00000440097 MDGA2Q7Z553 956 aa12.6□□□□□ -0.39
LIMD1-202ENST00000440097 ZNF679Q8IYX0 411 aa12.6□□□□□ -0.39
LIMD1-202ENST00000440097 OR51A4Q8NGJ6 313 aa12.6□□□□□ -0.39
LIMD1-202ENST00000440097 OR1J4Q8NGS1 313 aa12.6□□□□□ -0.39
LIMD1-202ENST00000440097 ASB17Q8WXJ9 295 aa12.6□□□□□ -0.39
LIMD1-202ENST00000440097 TMEM106AQ96A25 262 aa12.6□□□□□ -0.39
LIMD1-202ENST00000440097 OR8B4Q96RC9 309 aa12.6□□□□□ -0.39
LIMD1-202ENST00000440097 TAAR9Q96RI9 348 aa12.6□□□□□ -0.39
LIMD1-202ENST00000440097 CPAMD8Q8IZJ3 1885 aa12.6□□□□□ -0.39
LIMD1-202ENST00000440097 LINC01387J3KSC0 135 aa12.59□□□□□ -0.39
LIMD1-202ENST00000440097 DKK1O94907 266 aa12.59□□□□□ -0.39
LIMD1-202ENST00000440097 F10P00742 488 aa12.59□□□□□ -0.39
LIMD1-202ENST00000440097 MAS1P04201 325 aa12.59□□□□□ -0.39
LIMD1-202ENST00000440097 CD1AP06126 327 aa12.59□□□□□ -0.39
LIMD1-202ENST00000440097 CLRN1P58418 232 aa12.59□□□□□ -0.39
LIMD1-202ENST00000440097 TAS2R20P59543 309 aa12.59□□□□□ -0.39
LIMD1-202ENST00000440097 ZP4Q12836 540 aa12.59□□□□□ -0.39
LIMD1-202ENST00000440097 TMEM164Q5U3C3 297 aa12.59□□□□□ -0.39
LIMD1-202ENST00000440097 C11orf88Q6PI97 169 aa12.59□□□□□ -0.39
LIMD1-202ENST00000440097 CORO6Q6QEF8 472 aa12.59□□□□□ -0.39
LIMD1-202ENST00000440097 UNQ9370/PRO34162Q6UXP9 181 aa12.59□□□□□ -0.39
LIMD1-202ENST00000440097 WDFY1Q8IWB7 410 aa12.59□□□□□ -0.39
LIMD1-202ENST00000440097 OR10AC1Q8NH08 325 aa12.59□□□□□ -0.39
LIMD1-202ENST00000440097 LOXL4Q96JB6 756 aa12.59□□□□□ -0.39
LIMD1-202ENST00000440097 ABHD6Q9BV23 337 aa12.59□□□□□ -0.39
LIMD1-202ENST00000440097 SEC61A2Q9H9S3 476 aa12.59□□□□□ -0.39
LIMD1-202ENST00000440097 TMEM138Q9NPI0 162 aa12.59□□□□□ -0.39
LIMD1-202ENST00000440097 CENPMQ9NSP4 180 aa12.59□□□□□ -0.39
LIMD1-202ENST00000440097 MLXQ9UH92 298 aa12.59□□□□□ -0.39
LIMD1-202ENST00000440097 FARSAQ9Y285 508 aaKnown RBP12.59□□□□□ -0.39
LIMD1-202ENST00000440097 FAM186AA6NE01 2351 aa12.59□□□□□ -0.39
LIMD1-202ENST00000440097 TMEM272A0A1B0GTI8 110 aa12.59□□□□□ -0.39
LIMD1-202ENST00000440097 TMEM212A6NML5 194 aa12.59□□□□□ -0.39
LIMD1-202ENST00000440097 TMIGD3P0DMS9 266 aaPredicted RBP12.59□□□□□ -0.39
LIMD1-202ENST00000440097 CD59P13987 128 aa12.59□□□□□ -0.39
LIMD1-202ENST00000440097 RIDAP52758 137 aaKnown RBP12.59□□□□□ -0.39
LIMD1-202ENST00000440097 RASGEF1BQ0VAM2 473 aa12.59□□□□□ -0.39
LIMD1-202ENST00000440097 SLC17A1Q14916 467 aa12.59□□□□□ -0.39
LIMD1-202ENST00000440097 SLC25A53Q5H9E4 307 aa12.59□□□□□ -0.39
LIMD1-202ENST00000440097 ZNF468Q5VIY5 522 aaPredicted RBP12.59□□□□□ -0.39
LIMD1-202ENST00000440097 DCXRQ7Z4W1 244 aa12.59□□□□□ -0.39
LIMD1-202ENST00000440097 GPR148Q8TDV2 347 aa12.59□□□□□ -0.39
LIMD1-202ENST00000440097 TNFAIP8L1Q8WVP5 186 aa12.59□□□□□ -0.39
LIMD1-202ENST00000440097 DNTTIP1Q9H147 329 aa12.59□□□□□ -0.39
LIMD1-202ENST00000440097 POLR1DQ9Y2S0 133 aa12.59□□□□□ -0.39
LIMD1-202ENST00000440097 IGKV1D-43A0A0B4J1Z2 117 aa12.58□□□□□ -0.39
LIMD1-202ENST00000440097 A0A1B0GW55 424 aa12.58□□□□□ -0.39
LIMD1-202ENST00000440097 CDX4O14627 284 aaPredicted RBP12.58□□□□□ -0.39
LIMD1-202ENST00000440097 DOK2O60496 412 aa12.58□□□□□ -0.39
LIMD1-202ENST00000440097 IGHEP01854 428 aa12.58□□□□□ -0.39
LIMD1-202ENST00000440097 CD63P08962 238 aa12.58□□□□□ -0.39
LIMD1-202ENST00000440097 DUX4L2P0CJ85 424 aa12.58□□□□□ -0.39
LIMD1-202ENST00000440097 DUX4L3P0CJ86 424 aa12.58□□□□□ -0.39
LIMD1-202ENST00000440097 DUX4L4P0CJ87 422 aa12.58□□□□□ -0.39
LIMD1-202ENST00000440097 DUX4L5P0CJ88 424 aa12.58□□□□□ -0.39
LIMD1-202ENST00000440097 DUX4L6P0CJ89 424 aa12.58□□□□□ -0.39
LIMD1-202ENST00000440097 DUX4L7P0CJ90 424 aa12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms