RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 HTR1FP30939 366 aa10.08□□□□□ -0.8
HSPG2-206ENST00000439717 SLC6A9P48067 706 aa10.08□□□□□ -0.8
HSPG2-206ENST00000439717 PRKXP51817 358 aa10.08□□□□□ -0.8
HSPG2-206ENST00000439717 SNRPGP62308 76 aaKnown RBP10.08□□□□□ -0.8
HSPG2-206ENST00000439717 POU4F2Q12837 409 aa10.08□□□□□ -0.8
HSPG2-206ENST00000439717 SLC25A30Q5SVS4 291 aa10.08□□□□□ -0.8
HSPG2-206ENST00000439717 KCTD18Q6PI47 426 aaPredicted RBP10.08□□□□□ -0.8
HSPG2-206ENST00000439717 DEGS2Q6QHC5 323 aa10.08□□□□□ -0.8
HSPG2-206ENST00000439717 SPATC1Q76KD6 591 aa10.08□□□□□ -0.8
HSPG2-206ENST00000439717 BCDIN3DQ7Z5W3 292 aaKnown RBP10.08□□□□□ -0.8
HSPG2-206ENST00000439717 NAA40Q86UY6 237 aa10.08□□□□□ -0.8
HSPG2-206ENST00000439717 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.08□□□□□ -0.8
HSPG2-206ENST00000439717 PACRGLQ8N7B6 248 aa10.08□□□□□ -0.8
HSPG2-206ENST00000439717 ZNF283Q8N7M2 679 aa10.08□□□□□ -0.8
HSPG2-206ENST00000439717 ZNF540Q8NDQ6 660 aa10.08□□□□□ -0.8
HSPG2-206ENST00000439717 C10orf105Q8TEF2 133 aa10.08□□□□□ -0.8
HSPG2-206ENST00000439717 ASB17Q8WXJ9 295 aa10.08□□□□□ -0.8
HSPG2-206ENST00000439717 COX4I2Q96KJ9 171 aa10.08□□□□□ -0.8
HSPG2-206ENST00000439717 AMELYQ99218 206 aa10.08□□□□□ -0.8
HSPG2-206ENST00000439717 PIMREGQ9BSJ6 248 aa10.08□□□□□ -0.8
HSPG2-206ENST00000439717 REG4Q9BYZ8 158 aa10.08□□□□□ -0.8
HSPG2-206ENST00000439717 OPA3Q9H6K4 179 aa10.08□□□□□ -0.8
HSPG2-206ENST00000439717 NIPAL2Q9H841 368 aa10.08□□□□□ -0.8
HSPG2-206ENST00000439717 RTTNQ86VV8 2226 aa10.07□□□□□ -0.8
HSPG2-206ENST00000439717 IGHV4-30-2A0A087WSY4 118 aa10.07□□□□□ -0.8
HSPG2-206ENST00000439717 PHYHO14832 338 aa10.07□□□□□ -0.8
HSPG2-206ENST00000439717 IGHV1-46P01743 117 aa10.07□□□□□ -0.8
HSPG2-206ENST00000439717 MRPL3P09001 348 aaKnown RBP10.07□□□□□ -0.8
HSPG2-206ENST00000439717 INHBBP09529 407 aa10.07□□□□□ -0.8
HSPG2-206ENST00000439717 TNFSF4P23510 183 aa10.07□□□□□ -0.8
HSPG2-206ENST00000439717 GIFP27352 417 aa10.07□□□□□ -0.8
HSPG2-206ENST00000439717 MAGEB1P43366 347 aa10.07□□□□□ -0.8
HSPG2-206ENST00000439717 CX3CR1P49238 355 aa10.07□□□□□ -0.8
HSPG2-206ENST00000439717 ELF3P78545 371 aaPredicted RBP10.07□□□□□ -0.8
HSPG2-206ENST00000439717 CDK5R2Q13319 367 aa10.07□□□□□ -0.8
HSPG2-206ENST00000439717 GK2Q14410 553 aaPredicted RBP10.07□□□□□ -0.8
HSPG2-206ENST00000439717 HLXQ14774 488 aaPredicted RBP10.07□□□□□ -0.8
HSPG2-206ENST00000439717 TRIP10Q15642 601 aa10.07□□□□□ -0.8
HSPG2-206ENST00000439717 SNAI3Q3KNW1 292 aa10.07□□□□□ -0.8
HSPG2-206ENST00000439717 MEDAGQ5VYS4 303 aa10.07□□□□□ -0.8
HSPG2-206ENST00000439717 OR52H1Q8NGJ2 320 aa10.07□□□□□ -0.8
HSPG2-206ENST00000439717 RDH5Q92781 318 aa10.07□□□□□ -0.8
HSPG2-206ENST00000439717 ZNF582Q96NG8 517 aaPredicted RBP10.07□□□□□ -0.8
HSPG2-206ENST00000439717 EGLN1Q9GZT9 426 aa10.07□□□□□ -0.8
HSPG2-206ENST00000439717 DCLRE1BQ9H816 532 aa10.07□□□□□ -0.8
HSPG2-206ENST00000439717 ADGRL4Q9HBW9 690 aa10.07□□□□□ -0.8
HSPG2-206ENST00000439717 DECR2Q9NUI1 292 aa10.07□□□□□ -0.8
HSPG2-206ENST00000439717 FAM118AQ9NWS6 357 aa10.07□□□□□ -0.8
HSPG2-206ENST00000439717 CLN6Q9NWW5 311 aa10.07□□□□□ -0.8
HSPG2-206ENST00000439717 SMPD3Q9NY59 655 aaPredicted RBP10.07□□□□□ -0.8
HSPG2-206ENST00000439717 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.07□□□□□ -0.8
HSPG2-206ENST00000439717 KLHDC2Q9Y2U9 406 aa10.07□□□□□ -0.8
HSPG2-206ENST00000439717 GMPPBQ9Y5P6 360 aa10.07□□□□□ -0.8
HSPG2-206ENST00000439717 LOC100130705A0A1B0GUX0 176 aa10.06□□□□□ -0.8
HSPG2-206ENST00000439717 ZSCAN5BA6NJL1 495 aa10.06□□□□□ -0.8
HSPG2-206ENST00000439717 SNTNA6NMZ2 147 aa10.06□□□□□ -0.8
HSPG2-206ENST00000439717 IQCF6A8MYZ5 107 aa10.06□□□□□ -0.8
HSPG2-206ENST00000439717 VWC2LB2RUY7 222 aa10.06□□□□□ -0.8
HSPG2-206ENST00000439717 RNF223E7ERA6 249 aa10.06□□□□□ -0.8
HSPG2-206ENST00000439717 CASQ2O14958 399 aaPredicted RBP10.06□□□□□ -0.8
HSPG2-206ENST00000439717 SLC16A6O15403 523 aa10.06□□□□□ -0.8
HSPG2-206ENST00000439717 XRCC2O43543 280 aa10.06□□□□□ -0.8
HSPG2-206ENST00000439717 SPRY3O43610 288 aa10.06□□□□□ -0.8
HSPG2-206ENST00000439717 MPZL2O60487 215 aa10.06□□□□□ -0.8
HSPG2-206ENST00000439717 ZNF254O75437 659 aa10.06□□□□□ -0.8
HSPG2-206ENST00000439717 HPXP02790 462 aa10.06□□□□□ -0.8
HSPG2-206ENST00000439717 ANXA2P07355 339 aaKnown RBP10.06□□□□□ -0.8
HSPG2-206ENST00000439717 CD55P08174 381 aa10.06□□□□□ -0.8
HSPG2-206ENST00000439717 SBK2P0C263 348 aa10.06□□□□□ -0.8
HSPG2-206ENST00000439717 ACHEP22303 614 aa10.06□□□□□ -0.8
HSPG2-206ENST00000439717 DCTDP32321 178 aa10.06□□□□□ -0.8
HSPG2-206ENST00000439717 HCCSP53701 268 aa10.06□□□□□ -0.8
HSPG2-206ENST00000439717 ZNF121P58317 390 aaPredicted RBP10.06□□□□□ -0.8
HSPG2-206ENST00000439717 CCL8P80075 99 aa10.06□□□□□ -0.8
HSPG2-206ENST00000439717 ROM1Q03395 351 aa10.06□□□□□ -0.8
HSPG2-206ENST00000439717 OCLNQ16625 522 aa10.06□□□□□ -0.8
HSPG2-206ENST00000439717 OR2T2Q6IF00 324 aa10.06□□□□□ -0.8
HSPG2-206ENST00000439717 PGAP1Q75T13 922 aa10.06□□□□□ -0.8
HSPG2-206ENST00000439717 MRPL21Q7Z2W9 205 aaKnown RBP10.06□□□□□ -0.8
HSPG2-206ENST00000439717 KRT77Q7Z794 578 aa10.06□□□□□ -0.8
HSPG2-206ENST00000439717 BIVMQ86UB2 503 aa10.06□□□□□ -0.8
HSPG2-206ENST00000439717 SLC35F2Q8IXU6 374 aa10.06□□□□□ -0.8
HSPG2-206ENST00000439717 CIARTQ8N365 385 aaPredicted RBP10.06□□□□□ -0.8
HSPG2-206ENST00000439717 ZNF555Q8NEP9 628 aa10.06□□□□□ -0.8
HSPG2-206ENST00000439717 OR8G5Q8NG78 346 aa10.06□□□□□ -0.8
HSPG2-206ENST00000439717 GTF3AQ92664 365 aaKnown RBP10.06□□□□□ -0.8
HSPG2-206ENST00000439717 SPSB4Q96A44 273 aa10.06□□□□□ -0.8
HSPG2-206ENST00000439717 REPIN1Q9BWE0 567 aaKnown RBP10.06□□□□□ -0.8
HSPG2-206ENST00000439717 MROQ9BYG7 248 aa10.06□□□□□ -0.8
HSPG2-206ENST00000439717 CHODLQ9H9P2 273 aa10.06□□□□□ -0.8
HSPG2-206ENST00000439717 SAP30LQ9HAJ7 183 aa10.06□□□□□ -0.8
HSPG2-206ENST00000439717 MSL2Q9HCI7 577 aa10.06□□□□□ -0.8
HSPG2-206ENST00000439717 DNAJC27Q9NZQ0 273 aa10.06□□□□□ -0.8
HSPG2-206ENST00000439717 A0A096LNT2 108 aa10.05□□□□□ -0.8
HSPG2-206ENST00000439717 A0A1B0GWJ7 208 aa10.05□□□□□ -0.8
HSPG2-206ENST00000439717 ACOD1A6NK06 481 aa10.05□□□□□ -0.8
HSPG2-206ENST00000439717 ZNF670-ZNF695F2Z2N8 137 aa10.05□□□□□ -0.8
HSPG2-206ENST00000439717 DLGAP1O14490 977 aa10.05□□□□□ -0.8
HSPG2-206ENST00000439717 TPD52L2O43399 206 aaKnown RBP10.05□□□□□ -0.8
HSPG2-206ENST00000439717 NCR1O76036 304 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms