RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 MYCBPQ99417 103 aaPredicted RBP6.12□□□□□ -1.43
LSM3P3-201ENST00000436601 ATF6BQ99941 703 aa6.12□□□□□ -1.43
LSM3P3-201ENST00000436601 MROQ9BYG7 248 aa6.12□□□□□ -1.43
LSM3P3-201ENST00000436601 RBM38Q9H0Z9 239 aaKnown RBP6.12□□□□□ -1.43
LSM3P3-201ENST00000436601 POFUT1Q9H488 388 aa6.12□□□□□ -1.43
LSM3P3-201ENST00000436601 KIAA1549Q9HCM3 1950 aa6.12□□□□□ -1.43
LSM3P3-201ENST00000436601 DDX28Q9NUL7 540 aaKnown RBP6.12□□□□□ -1.43
LSM3P3-201ENST00000436601 LRP12Q9Y561 859 aa6.12□□□□□ -1.43
LSM3P3-201ENST00000436601 CEPT1Q9Y6K0 416 aa6.12□□□□□ -1.43
LSM3P3-201ENST00000436601 CHD8Q9HCK8 2581 aa6.12□□□□□ -1.43
LSM3P3-201ENST00000436601 ZZEF1O43149 2961 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 ARPC4-TTLL3A0A0A6YYG9 625 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 A0A1B0GUH1 482 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 PNMA8CA0A1B0GUJ8 204 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 A0A1W2PR80 420 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 OR6C6A6NF89 314 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 EEF1E1-BLOC1S5C9J1V9 151 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 ZNF878C9JN71 531 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 CCRL2O00421 344 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 EEF1E1O43324 174 aaKnown RBP6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 PLPP2O43688 288 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 CLEC2LP0C7M8 214 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 CD79AP11912 226 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 CD36P16671 472 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 FAHP16930 419 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 CELP19835 753 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 PSMB1P20618 241 aaKnown RBP6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 CRYGSP22914 178 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 ANOS1P23352 680 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 DCTDP32321 178 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 ARR3P36575 388 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 KIR3DL2P43630 455 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 CAPZA2P47755 286 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 TGM4P49221 684 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 RIDAP52758 137 aaKnown RBP6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 RAB1AP62820 205 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 HGFACQ04756 655 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 FAM27E3Q08E93 113 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 GPR50Q13585 617 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 CDK5R1Q15078 307 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 RAB35Q15286 201 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 CDSNQ15517 529 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 CCDC58Q4VC31 144 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 GPR107Q5VW38 600 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 LIPKQ5VXJ0 399 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 RPL22L1Q6P5R6 122 aaKnown RBP6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 BHLHA15Q7RTS1 189 aaPredicted RBP6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 PRSS45Q7RTY3 260 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 FAM220AQ7Z4H9 259 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 DPPA2Q7Z7J5 298 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 NAA40Q86UY6 237 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 MDP1Q86V88 176 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 ZNF584Q8IVC4 421 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 CCDC36Q8IYA8 594 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 PRSS35Q8N3Z0 413 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 IL17RDQ8NFM7 739 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 OR1F12Q8NHA8 337 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 RPS4Y2Q8TD47 263 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 SLC7A6Q92536 515 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 UFD1Q92890 307 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 FUNDC2Q9BWH2 189 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 NAA50Q9GZZ1 169 aaKnown RBP6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 HDHD2Q9H0R4 259 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 KCNN2Q9H2S1 579 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 RNF121Q9H920 327 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 TRIM36Q9NQ86 728 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 G6PC2Q9NQR9 355 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 BATF3Q9NR55 127 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 SLC17A5Q9NRA2 495 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 NDUFB11Q9NX14 153 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 FAM206AQ9NX38 181 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 GALNT8Q9NY28 637 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 ELOVL5Q9NYP7 299 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 PLEK2Q9NYT0 353 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 EDARQ9UNE0 448 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 SLC22A13Q9Y226 551 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 R4GMQ9 66 aa6.11□□□□□ -1.43
LSM3P3-201ENST00000436601 LOC100509620A0A075B734 347 aa6.1□□□□□ -1.43
LSM3P3-201ENST00000436601 TRBV2A0A0J9YWF9 115 aa6.1□□□□□ -1.43
LSM3P3-201ENST00000436601 SMIM31A0A1B0GVY4 71 aa6.1□□□□□ -1.43
LSM3P3-201ENST00000436601 TMEM269A0A1B0GVZ9 245 aa6.1□□□□□ -1.43
LSM3P3-201ENST00000436601 C5orf63A6NC05 138 aa6.1□□□□□ -1.43
LSM3P3-201ENST00000436601 OR5H1A6NKK0 313 aa6.1□□□□□ -1.43
LSM3P3-201ENST00000436601 OR4C45A6NMZ5 311 aa6.1□□□□□ -1.43
LSM3P3-201ENST00000436601 DOK2O60496 412 aa6.1□□□□□ -1.43
LSM3P3-201ENST00000436601 GPX5O75715 221 aa6.1□□□□□ -1.43
LSM3P3-201ENST00000436601 AGFG2O95081 481 aa6.1□□□□□ -1.43
LSM3P3-201ENST00000436601 ZFPL1O95159 310 aa6.1□□□□□ -1.43
LSM3P3-201ENST00000436601 UBL3O95164 117 aa6.1□□□□□ -1.43
LSM3P3-201ENST00000436601 HPXP02790 462 aa6.1□□□□□ -1.43
LSM3P3-201ENST00000436601 CD1AP06126 327 aa6.1□□□□□ -1.43
LSM3P3-201ENST00000436601 DBHP09172 617 aa6.1□□□□□ -1.43
LSM3P3-201ENST00000436601 SLC2A1P11166 492 aa6.1□□□□□ -1.43
LSM3P3-201ENST00000436601 CBR1P16152 277 aa6.1□□□□□ -1.43
LSM3P3-201ENST00000436601 GADD45AP24522 165 aa6.1□□□□□ -1.43
LSM3P3-201ENST00000436601 CHRNB4P30926 498 aa6.1□□□□□ -1.43
LSM3P3-201ENST00000436601 CCKARP32238 428 aa6.1□□□□□ -1.43
LSM3P3-201ENST00000436601 OTX1P32242 354 aaPredicted RBP6.1□□□□□ -1.43
LSM3P3-201ENST00000436601 TTKP33981 857 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms