RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 SIAH1Q8IUQ4 282 aa10.18□□□□□ -0.78
SCN4A-201ENST00000435607 OR4A4PQ8NGN8 299 aa10.18□□□□□ -0.78
SCN4A-201ENST00000435607 MISP3Q96FF7 219 aa10.18□□□□□ -0.78
SCN4A-201ENST00000435607 KPTNQ9Y664 436 aa10.18□□□□□ -0.78
SCN4A-201ENST00000435607 OR2T8A6NH00 312 aa10.18□□□□□ -0.78
SCN4A-201ENST00000435607 PAX5Q02548 391 aa10.18□□□□□ -0.78
SCN4A-201ENST00000435607 NRSN2Q9GZP1 204 aa10.18□□□□□ -0.78
SCN4A-201ENST00000435607 SRRQ9GZT4 340 aa10.18□□□□□ -0.78
SCN4A-201ENST00000435607 UBTD1Q9HAC8 227 aa10.18□□□□□ -0.78
SCN4A-201ENST00000435607 GABRA1P14867 456 aa10.18□□□□□ -0.78
SCN4A-201ENST00000435607 CRISP2P16562 243 aa10.18□□□□□ -0.78
SCN4A-201ENST00000435607 PPICP45877 212 aa10.18□□□□□ -0.78
SCN4A-201ENST00000435607 IL11RAQ14626 422 aa10.18□□□□□ -0.78
SCN4A-201ENST00000435607 PXT1Q8NFP0 134 aa10.18□□□□□ -0.78
SCN4A-201ENST00000435607 UGT2A1Q9Y4X1 527 aa10.18□□□□□ -0.78
SCN4A-201ENST00000435607 ZNF638Q14966 1978 aaKnown RBP10.18□□□□□ -0.78
SCN4A-201ENST00000435607 ARFGEF2Q9Y6D5 1785 aa10.18□□□□□ -0.78
SCN4A-201ENST00000435607 J3KTA2 159 aa10.18□□□□□ -0.78
SCN4A-201ENST00000435607 KIR2DL1P43626 348 aaPredicted RBP10.18□□□□□ -0.78
SCN4A-201ENST00000435607 KIR2DL2P43627 348 aaPredicted RBP10.18□□□□□ -0.78
SCN4A-201ENST00000435607 IZUMO4Q1ZYL8 232 aa10.18□□□□□ -0.78
SCN4A-201ENST00000435607 DHRS7BQ6IAN0 325 aaPredicted RBP10.18□□□□□ -0.78
SCN4A-201ENST00000435607 DEFB124Q8NES8 71 aa10.18□□□□□ -0.78
SCN4A-201ENST00000435607 PDXPQ96GD0 296 aa10.18□□□□□ -0.78
SCN4A-201ENST00000435607 RSRP1Q9BUV0 290 aa10.18□□□□□ -0.78
SCN4A-201ENST00000435607 CCL26Q9Y258 94 aa10.18□□□□□ -0.78
SCN4A-201ENST00000435607 OR2J2O76002 312 aa10.18□□□□□ -0.78
SCN4A-201ENST00000435607 H3F3AP84243 136 aa10.18□□□□□ -0.78
SCN4A-201ENST00000435607 AGBL4Q5VU57 503 aa10.18□□□□□ -0.78
SCN4A-201ENST00000435607 OR10K1Q8NGX5 313 aa10.18□□□□□ -0.78
SCN4A-201ENST00000435607 TTC9Q92623 222 aa10.18□□□□□ -0.78
SCN4A-201ENST00000435607 RASL11BQ9BPW5 248 aa10.18□□□□□ -0.78
SCN4A-201ENST00000435607 RHOFQ9HBH0 211 aa10.18□□□□□ -0.78
SCN4A-201ENST00000435607 COX6B1P14854 86 aa10.18□□□□□ -0.78
SCN4A-201ENST00000435607 PCSK6P29122 969 aa10.18□□□□□ -0.78
SCN4A-201ENST00000435607 ZNF83P51522 516 aa10.18□□□□□ -0.78
SCN4A-201ENST00000435607 FOXA1P55317 472 aa10.18□□□□□ -0.78
SCN4A-201ENST00000435607 CLDN10P78369 228 aa10.18□□□□□ -0.78
SCN4A-201ENST00000435607 SLC51BQ86UW2 128 aa10.18□□□□□ -0.78
SCN4A-201ENST00000435607 CALHM3Q86XJ0 350 aa10.18□□□□□ -0.78
SCN4A-201ENST00000435607 OR13G1Q8NGZ3 307 aa10.18□□□□□ -0.78
SCN4A-201ENST00000435607 TINAGL1Q9GZM7 467 aaPredicted RBP10.18□□□□□ -0.78
SCN4A-201ENST00000435607 PSENENQ9NZ42 101 aa10.18□□□□□ -0.78
SCN4A-201ENST00000435607 CALCBP10092 127 aa10.17□□□□□ -0.78
SCN4A-201ENST00000435607 GABRB3P28472 473 aa10.17□□□□□ -0.78
SCN4A-201ENST00000435607 FUT6P51993 359 aa10.17□□□□□ -0.78
SCN4A-201ENST00000435607 GSG1Q2KHT4 349 aa10.17□□□□□ -0.78
SCN4A-201ENST00000435607 TMEM81Q6P7N7 255 aa10.17□□□□□ -0.78
SCN4A-201ENST00000435607 UBE3DQ7Z6J8 389 aa10.17□□□□□ -0.78
SCN4A-201ENST00000435607 OR4Q3Q8NH05 313 aa10.17□□□□□ -0.78
SCN4A-201ENST00000435607 SDHAP31040 664 aa10.17□□□□□ -0.78
SCN4A-201ENST00000435607 OPRL1P41146 370 aa10.17□□□□□ -0.78
SCN4A-201ENST00000435607 SUMO3P55854 103 aaPredicted RBP10.17□□□□□ -0.78
SCN4A-201ENST00000435607 EGR3Q06889 387 aa10.17□□□□□ -0.78
SCN4A-201ENST00000435607 TRMT12Q53H54 448 aaKnown RBP10.17□□□□□ -0.78
SCN4A-201ENST00000435607 TBPL2Q6SJ96 375 aa10.17□□□□□ -0.78
SCN4A-201ENST00000435607 ZNF740Q8NDX6 193 aa10.17□□□□□ -0.78
SCN4A-201ENST00000435607 OR8B3Q8NGG8 313 aa10.17□□□□□ -0.78
SCN4A-201ENST00000435607 OR8B2Q96RD0 313 aa10.17□□□□□ -0.78
SCN4A-201ENST00000435607 SLC26A1Q9H2B4 701 aa10.17□□□□□ -0.78
SCN4A-201ENST00000435607 TGOLN2O43493 480 aa10.17□□□□□ -0.78
SCN4A-201ENST00000435607 ZBTB25P24278 435 aa10.17□□□□□ -0.78
SCN4A-201ENST00000435607 MPLP40238 635 aa10.17□□□□□ -0.78
SCN4A-201ENST00000435607 OPRK1P41145 380 aa10.17□□□□□ -0.78
SCN4A-201ENST00000435607 RPL30P62888 115 aaKnown RBP10.17□□□□□ -0.78
SCN4A-201ENST00000435607 KLHDC1Q8N7A1 406 aa10.17□□□□□ -0.78
SCN4A-201ENST00000435607 OR13C5Q8NGS8 318 aa10.17□□□□□ -0.78
SCN4A-201ENST00000435607 TMEM255BQ8WV15 326 aa10.17□□□□□ -0.78
SCN4A-201ENST00000435607 RND1Q92730 232 aa10.17□□□□□ -0.78
SCN4A-201ENST00000435607 ZNF2Q9BSG1 426 aaPredicted RBP10.17□□□□□ -0.78
SCN4A-201ENST00000435607 ZNF391Q9UJN7 358 aa10.17□□□□□ -0.78
SCN4A-201ENST00000435607 PYCR3Q53H96 274 aa10.17□□□□□ -0.78
SCN4A-201ENST00000435607 CHST8Q9H2A9 424 aa10.17□□□□□ -0.78
SCN4A-201ENST00000435607 ASCC3Q8N3C0 2202 aaKnown RBP10.17□□□□□ -0.78
SCN4A-201ENST00000435607 SMLR1H3BR10 107 aa10.17□□□□□ -0.78
SCN4A-201ENST00000435607 PNLIPRP2P54317 469 aa10.17□□□□□ -0.78
SCN4A-201ENST00000435607 SUMO1P63165 101 aaKnown RBP10.17□□□□□ -0.78
SCN4A-201ENST00000435607 RTP5Q14D33 572 aa10.17□□□□□ -0.78
SCN4A-201ENST00000435607 H3F3CQ6NXT2 135 aa10.17□□□□□ -0.78
SCN4A-201ENST00000435607 BATF2Q8N1L9 274 aa10.17□□□□□ -0.78
SCN4A-201ENST00000435607 NPEPL1Q8NDH3 523 aa10.17□□□□□ -0.78
SCN4A-201ENST00000435607 PLSCR3Q9NRY6 295 aa10.17□□□□□ -0.78
SCN4A-201ENST00000435607 M0QYG6 137 aa10.17□□□□□ -0.78
SCN4A-201ENST00000435607 SEMA7AO75326 666 aa10.17□□□□□ -0.78
SCN4A-201ENST00000435607 CAPZBP47756 277 aa10.17□□□□□ -0.78
SCN4A-201ENST00000435607 PRDX4Q13162 271 aa10.17□□□□□ -0.78
SCN4A-201ENST00000435607 C8orf44Q96CB5 159 aa10.17□□□□□ -0.78
SCN4A-201ENST00000435607 S1PR5Q9H228 398 aa10.17□□□□□ -0.78
SCN4A-201ENST00000435607 hADV38S2A0JD32 116 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 SELENOFO60613 162 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 MT-CO3P00414 261 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 FGF2P09038 288 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 CASP3P42574 277 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 PPP2CAP67775 309 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 HTR4Q13639 388 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 SLC25A30Q5SVS4 291 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 NHLRC1Q6VVB1 395 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 ZNF511Q8NB15 262 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 LMO3Q8TAP4 145 aa10.16□□□□□ -0.78
SCN4A-201ENST00000435607 UCK1Q9HA47 277 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms