RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 CD34P28906 385 aa9.25□□□□□ -0.93
CD44-210ENST00000434472 QRFPP83859 136 aa9.25□□□□□ -0.93
CD44-210ENST00000434472 GK2Q14410 553 aaPredicted RBP9.25□□□□□ -0.93
CD44-210ENST00000434472 EXT1Q16394 746 aa9.25□□□□□ -0.93
CD44-210ENST00000434472 HIST3H3Q16695 136 aa9.25□□□□□ -0.93
CD44-210ENST00000434472 C2orf68Q2NKX9 166 aa9.25□□□□□ -0.93
CD44-210ENST00000434472 MOGAT2Q3SYC2 334 aa9.25□□□□□ -0.93
CD44-210ENST00000434472 ACTBL2Q562R1 376 aa9.25□□□□□ -0.93
CD44-210ENST00000434472 FAHD2BQ6P2I3 314 aaPredicted RBP9.25□□□□□ -0.93
CD44-210ENST00000434472 DOK3Q7L591 496 aa9.25□□□□□ -0.93
CD44-210ENST00000434472 SLC25A42Q86VD7 318 aa9.25□□□□□ -0.93
CD44-210ENST00000434472 CCDC54Q8NEL0 328 aa9.25□□□□□ -0.93
CD44-210ENST00000434472 STEAP2Q8NFT2 490 aa9.25□□□□□ -0.93
CD44-210ENST00000434472 OR52N4Q8NGI2 321 aa9.25□□□□□ -0.93
CD44-210ENST00000434472 ADAT3Q96EY9 351 aaPredicted RBP9.25□□□□□ -0.93
CD44-210ENST00000434472 FAHD2AQ96GK7 314 aa9.25□□□□□ -0.93
CD44-210ENST00000434472 GAL3ST1Q99999 423 aa9.25□□□□□ -0.93
CD44-210ENST00000434472 MESP1Q9BRJ9 268 aa9.25□□□□□ -0.93
CD44-210ENST00000434472 CHST6Q9GZX3 395 aa9.25□□□□□ -0.93
CD44-210ENST00000434472 ARL6Q9H0F7 186 aa9.25□□□□□ -0.93
CD44-210ENST00000434472 DUX4Q9UBX2 424 aa9.25□□□□□ -0.93
CD44-210ENST00000434472 HRH3Q9Y5N1 445 aa9.25□□□□□ -0.93
CD44-210ENST00000434472 SESN1Q9Y6P5 492 aa9.25□□□□□ -0.93
CD44-210ENST00000434472 RP1P56715 2156 aa9.24□□□□□ -0.93
CD44-210ENST00000434472 A0A0D9SG52 128 aa9.24□□□□□ -0.93
CD44-210ENST00000434472 hCG_1807616A0A1W2PRN6 198 aa9.24□□□□□ -0.93
CD44-210ENST00000434472 TMEM235A6NFC5 223 aa9.24□□□□□ -0.93
CD44-210ENST00000434472 SULT2B1O00204 365 aa9.24□□□□□ -0.93
CD44-210ENST00000434472 EIF1BO60739 113 aaKnown RBP9.24□□□□□ -0.93
CD44-210ENST00000434472 CD8AP01732 235 aa9.24□□□□□ -0.93
CD44-210ENST00000434472 GSTP1P09211 210 aaKnown RBP9.24□□□□□ -0.93
CD44-210ENST00000434472 VSIG8P0DPA2 414 aa9.24□□□□□ -0.93
CD44-210ENST00000434472 ZNF28P17035 718 aa9.24□□□□□ -0.93
CD44-210ENST00000434472 HLA-GP17693 338 aa9.24□□□□□ -0.93
CD44-210ENST00000434472 ENPP1P22413 925 aa9.24□□□□□ -0.93
CD44-210ENST00000434472 CTSSP25774 331 aa9.24□□□□□ -0.93
CD44-210ENST00000434472 ZNF93P35789 620 aaPredicted RBP9.24□□□□□ -0.93
CD44-210ENST00000434472 GUCA1AP43080 201 aaPredicted RBP9.24□□□□□ -0.93
CD44-210ENST00000434472 TAS2R31P59538 309 aa9.24□□□□□ -0.93
CD44-210ENST00000434472 LSM6P62312 80 aaKnown RBP9.24□□□□□ -0.93
CD44-210ENST00000434472 BAMBIQ13145 260 aa9.24□□□□□ -0.93
CD44-210ENST00000434472 TRA2AQ13595 282 aaKnown RBP eCLIP9.24□□□□□ -0.93
CD44-210ENST00000434472 PCOLCEQ15113 449 aa9.24□□□□□ -0.93
CD44-210ENST00000434472 TMEM176BQ3YBM2 270 aaPredicted RBP9.24□□□□□ -0.93
CD44-210ENST00000434472 SCGB2B2Q4G0G5 96 aa9.24□□□□□ -0.93
CD44-210ENST00000434472 AWAT2Q6E213 333 aa9.24□□□□□ -0.93
CD44-210ENST00000434472 SIGIRRQ6IA17 410 aa9.24□□□□□ -0.93
CD44-210ENST00000434472 OR10K2Q6IF99 312 aa9.24□□□□□ -0.93
CD44-210ENST00000434472 TMEM65Q6PI78 240 aa9.24□□□□□ -0.93
CD44-210ENST00000434472 GSG1LQ6UXU4 331 aa9.24□□□□□ -0.93
CD44-210ENST00000434472 CFAP77Q6ZQR2 320 aa9.24□□□□□ -0.93
CD44-210ENST00000434472 TMPPEQ6ZT21 453 aa9.24□□□□□ -0.93
CD44-210ENST00000434472 RFPL4BQ6ZWI9 263 aa9.24□□□□□ -0.93
CD44-210ENST00000434472 TMED4Q7Z7H5 227 aa9.24□□□□□ -0.93
CD44-210ENST00000434472 GPAT4Q86UL3 456 aa9.24□□□□□ -0.93
CD44-210ENST00000434472 SLC51BQ86UW2 128 aa9.24□□□□□ -0.93
CD44-210ENST00000434472 GTPBP8Q8N3Z3 284 aaPredicted RBP9.24□□□□□ -0.93
CD44-210ENST00000434472 PAQR4Q8N4S7 273 aaPredicted RBP9.24□□□□□ -0.93
CD44-210ENST00000434472 OR13C9Q8NGT0 318 aa9.24□□□□□ -0.93
CD44-210ENST00000434472 OR10R2Q8NGX6 335 aa9.24□□□□□ -0.93
CD44-210ENST00000434472 KCNG3Q8TAE7 436 aa9.24□□□□□ -0.93
CD44-210ENST00000434472 M1APQ8TC57 530 aa9.24□□□□□ -0.93
CD44-210ENST00000434472 OR51E1Q8TCB6 317 aa9.24□□□□□ -0.93
CD44-210ENST00000434472 RBPMSQ93062 196 aaKnown RBP9.24□□□□□ -0.93
CD44-210ENST00000434472 NKD1Q969G9 470 aa9.24□□□□□ -0.93
CD44-210ENST00000434472 NKX3-1Q99801 234 aaPredicted RBP9.24□□□□□ -0.93
CD44-210ENST00000434472 SLC6A7Q99884 636 aa9.24□□□□□ -0.93
CD44-210ENST00000434472 DHRS9Q9BPW9 319 aa9.24□□□□□ -0.93
CD44-210ENST00000434472 NAA11Q9BSU3 229 aaPredicted RBP9.24□□□□□ -0.93
CD44-210ENST00000434472 MFFQ9GZY8 342 aa9.24□□□□□ -0.93
CD44-210ENST00000434472 ZNF700Q9H0M5 742 aa9.24□□□□□ -0.93
CD44-210ENST00000434472 CDCP1Q9H5V8 836 aa9.24□□□□□ -0.93
CD44-210ENST00000434472 RDH8Q9NYR8 311 aa9.24□□□□□ -0.93
CD44-210ENST00000434472 COMMD9Q9P000 198 aa9.24□□□□□ -0.93
CD44-210ENST00000434472 FBXL2Q9UKC9 423 aa9.24□□□□□ -0.93
CD44-210ENST00000434472 FARSAQ9Y285 508 aaKnown RBP9.24□□□□□ -0.93
CD44-210ENST00000434472 ABCA7Q8IZY2 2146 aa9.24□□□□□ -0.93
CD44-210ENST00000434472 LAMA3Q16787 3333 aa9.24□□□□□ -0.93
CD44-210ENST00000434472 PCNX3Q9H6A9 2034 aa9.24□□□□□ -0.93
CD44-210ENST00000434472 SEC16AO15027 2179 aa9.24□□□□□ -0.93
CD44-210ENST00000434472 UNC13CQ8NB66 2214 aa9.24□□□□□ -0.93
CD44-210ENST00000434472 A0A1W2PNR3 127 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 VAMP5O95183 116 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 KLK3P07288 261 aaPredicted RBP9.23□□□□□ -0.93
CD44-210ENST00000434472 DCNP07585 359 aaKnown RBP9.23□□□□□ -0.93
CD44-210ENST00000434472 QDPRP09417 244 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 SLC25A4P12235 298 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 CBX5P45973 191 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 DUSP3P51452 185 aaPredicted RBP9.23□□□□□ -0.93
CD44-210ENST00000434472 PRKXP51817 358 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 UBE2MP61081 183 aaKnown RBP9.23□□□□□ -0.93
CD44-210ENST00000434472 RPS27AP62979 156 aaKnown RBP9.23□□□□□ -0.93
CD44-210ENST00000434472 UBA52P62987 128 aaKnown RBP9.23□□□□□ -0.93
CD44-210ENST00000434472 CXADRP78310 365 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 FOXK1P85037 733 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 SORDQ00796 357 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 UNC119Q13432 240 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 PNLIPRP3Q17RR3 467 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 HLA-BQ31612 363 aa9.23□□□□□ -0.93
CD44-210ENST00000434472 DCAF12L2Q5VW00 463 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms